BLASTX nr result

ID: Chrysanthemum22_contig00009443 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00009443
         (572 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH94256.1| Kinetochore protein Ndc80, partial [Cynara cardun...    58   1e-06

>gb|KVH94256.1| Kinetochore protein Ndc80, partial [Cynara cardunculus var.
           scolymus]
          Length = 345

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = -3

Query: 501 KKKVEEKRWDLNAVIGRKWKEFVALQRECNQAIRR 397
           KKKVEEK WDLNA+IG K+KE  ALQ ECNQAIRR
Sbjct: 186 KKKVEEKCWDLNALIGTKFKELEALQIECNQAIRR 220


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