BLASTX nr result

ID: Chrysanthemum22_contig00009004 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00009004
         (353 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021987948.1| protein SCAR2-like [Helianthus annuus] >gi|1...    75   3e-13
gb|KVH94896.1| hypothetical protein Ccrd_003044 [Cynara carduncu...    73   1e-12
ref|XP_022010282.1| protein SCAR2-like isoform X2 [Helianthus an...    63   4e-09
ref|XP_022010281.1| protein SCAR2-like isoform X1 [Helianthus an...    63   4e-09
gb|PLY95980.1| hypothetical protein LSAT_9X37081 [Lactuca sativa]      55   2e-06
ref|XP_023749923.1| protein SCAR4-like [Lactuca sativa]                55   2e-06

>ref|XP_021987948.1| protein SCAR2-like [Helianthus annuus]
 gb|OTG10471.1| putative SCAR/WAVE family [Helianthus annuus]
          Length = 1237

 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 47/96 (48%), Positives = 53/96 (55%)
 Frame = +1

Query: 55  NMSPRGVNSPHAFASTEIPFRPRSAPQQASDNSTEVSDNAALPVDQGVISKESTSKESDL 234
           NMSPR VNSPHAFASTEIPFRPR    Q                            ESDL
Sbjct: 420 NMSPR-VNSPHAFASTEIPFRPRVLHTQ----------------------------ESDL 450

Query: 235 SELSSNNCVDVSSPKKNEESENDLEDIVASTSELDD 342
           SE+SS+NCVDV+ P K  E END ED +AS  + D+
Sbjct: 451 SEMSSSNCVDVNIPTKGGEIENDPEDCIASRIDEDN 486


>gb|KVH94896.1| hypothetical protein Ccrd_003044 [Cynara cardunculus var. scolymus]
          Length = 1381

 Score = 73.2 bits (178), Expect = 1e-12
 Identities = 46/87 (52%), Positives = 56/87 (64%)
 Frame = +1

Query: 73  VNSPHAFASTEIPFRPRSAPQQASDNSTEVSDNAALPVDQGVISKESTSKESDLSELSSN 252
           ++S  AFA  EIPFRPR +           + +AALPVDQ    ++ST K+SD SE+ SN
Sbjct: 441 IDSSQAFACIEIPFRPRVS-----------ATDAALPVDQEANFEKST-KDSDFSEMPSN 488

Query: 253 NCVDVSSPKKNEESENDLEDIVASTSE 333
           N VDV+SPKK EE   D E IVASTSE
Sbjct: 489 NRVDVNSPKKTEEFPIDPEAIVASTSE 515


>ref|XP_022010282.1| protein SCAR2-like isoform X2 [Helianthus annuus]
          Length = 606

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 46/96 (47%), Positives = 53/96 (55%)
 Frame = +1

Query: 55  NMSPRGVNSPHAFASTEIPFRPRSAPQQASDNSTEVSDNAALPVDQGVISKESTSKESDL 234
           NMSPRG + P  FASTEIPFRPR    Q SDN T+      L VDQ  I  E        
Sbjct: 295 NMSPRGNDFPRPFASTEIPFRPR---VQISDNCTD------LLVDQETIFIE-------- 337

Query: 235 SELSSNNCVDVSSPKKNEESENDLEDIVASTSELDD 342
                NNCVDV SP K +E+E D +D++AS    DD
Sbjct: 338 -----NNCVDVKSPIK-KENEIDSDDVMASFLVEDD 367


>ref|XP_022010281.1| protein SCAR2-like isoform X1 [Helianthus annuus]
 gb|OTF93629.1| putative SCAR/WAVE family [Helianthus annuus]
          Length = 671

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 46/96 (47%), Positives = 53/96 (55%)
 Frame = +1

Query: 55  NMSPRGVNSPHAFASTEIPFRPRSAPQQASDNSTEVSDNAALPVDQGVISKESTSKESDL 234
           NMSPRG + P  FASTEIPFRPR    Q SDN T+      L VDQ  I  E        
Sbjct: 360 NMSPRGNDFPRPFASTEIPFRPR---VQISDNCTD------LLVDQETIFIE-------- 402

Query: 235 SELSSNNCVDVSSPKKNEESENDLEDIVASTSELDD 342
                NNCVDV SP K +E+E D +D++AS    DD
Sbjct: 403 -----NNCVDVKSPIK-KENEIDSDDVMASFLVEDD 432


>gb|PLY95980.1| hypothetical protein LSAT_9X37081 [Lactuca sativa]
          Length = 1032

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
 Frame = +1

Query: 76  NSPHA--FASTEIPFRPRSAPQQASDNSTEVSDNAALPVDQGVISKESTSKESDLSELSS 249
           N+P +  FASTEIPFRPR  P Q S              D+GV+ +ES SKES LSE+SS
Sbjct: 435 NTPRSVTFASTEIPFRPRILPSQVS--------------DEGVVLEESGSKESGLSEMSS 480

Query: 250 NNCVDVSSPKKNEESENDLEDIVASTSELDDVHS 351
           +N +D   P+    S ND  D  +S  + +D +S
Sbjct: 481 SNQID---PEAIAASTND--DPSSSNLQSEDGNS 509


>ref|XP_023749923.1| protein SCAR4-like [Lactuca sativa]
          Length = 1075

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
 Frame = +1

Query: 76  NSPHA--FASTEIPFRPRSAPQQASDNSTEVSDNAALPVDQGVISKESTSKESDLSELSS 249
           N+P +  FASTEIPFRPR  P Q S              D+GV+ +ES SKES LSE+SS
Sbjct: 435 NTPRSVTFASTEIPFRPRILPSQVS--------------DEGVVLEESGSKESGLSEMSS 480

Query: 250 NNCVDVSSPKKNEESENDLEDIVASTSELDDVHS 351
           +N +D   P+    S ND  D  +S  + +D +S
Sbjct: 481 SNQID---PEAIAASTND--DPSSSNLQSEDGNS 509


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