BLASTX nr result

ID: Chrysanthemum22_contig00008948 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00008948
         (438 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023740020.1| 30S ribosomal protein S10, chloroplastic [La...   172   5e-52
ref|XP_022027246.1| 30S ribosomal protein S10, chloroplastic-lik...   171   1e-51
ref|XP_021740669.1| 30S ribosomal protein S10 alpha, chloroplast...   168   3e-50
ref|XP_021771357.1| 30S ribosomal protein S10 alpha, chloroplast...   167   8e-50
gb|PIN16593.1| 40S ribosomal protein S20 [Handroanthus impetigin...   166   2e-49
gb|PIN15995.1| 40S ribosomal protein S20 [Handroanthus impetigin...   166   2e-49
gb|PIN11404.1| 40S ribosomal protein S20 [Handroanthus impetigin...   165   4e-49
sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, ...   165   4e-49
pdb|5X8R|JJ Chain j, Structure Of The 30s Small Subunit Of Chlor...   162   4e-49
ref|XP_022843514.1| 30S ribosomal protein S10, chloroplastic-lik...   164   6e-49
ref|XP_018825110.1| PREDICTED: 30S ribosomal protein S10, chloro...   165   7e-49
ref|XP_011097778.2| 30S ribosomal protein S10, chloroplastic [Se...   163   9e-49
ref|XP_022001522.1| cyanelle 30S ribosomal protein S10-like [Hel...   164   1e-48
ref|XP_021608810.1| 30S ribosomal protein S10, chloroplastic-lik...   164   2e-48
ref|XP_021661870.1| 30S ribosomal protein S10, chloroplastic-lik...   164   2e-48
ref|XP_010675901.1| PREDICTED: 30S ribosomal protein S10, chloro...   163   3e-48
ref|XP_012070989.1| 30S ribosomal protein S10, chloroplastic [Ja...   163   3e-48
ref|XP_021842640.1| 30S ribosomal protein S10 alpha, chloroplast...   162   4e-48
ref|XP_015056091.1| PREDICTED: 30S ribosomal protein S10, chloro...   162   5e-48
ref|XP_006352534.1| PREDICTED: 30S ribosomal protein S10, chloro...   162   5e-48

>ref|XP_023740020.1| 30S ribosomal protein S10, chloroplastic [Lactuca sativa]
 gb|PLY69005.1| hypothetical protein LSAT_9X90400 [Lactuca sativa]
          Length = 185

 Score =  172 bits (436), Expect = 5e-52
 Identities = 82/88 (93%), Positives = 86/88 (97%)
 Frame = +3

Query: 6   EDGETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP 185
           ED E++T IVG+DS+KLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP
Sbjct: 67  EDPESSTVIVGSDSEKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP 126

Query: 186 TKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           TKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 127 TKKRIYCVLKSPHVHKDARFHFEIRTHQ 154


>ref|XP_022027246.1| 30S ribosomal protein S10, chloroplastic-like [Helianthus annuus]
 gb|OTG30153.1| putative ribosomal protein S10p/S20e family protein [Helianthus
           annuus]
          Length = 188

 Score =  171 bits (434), Expect = 1e-51
 Identities = 80/89 (89%), Positives = 86/89 (96%)
 Frame = +3

Query: 3   VEDGETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL 182
           +ED E++T I G+DS+K+APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL
Sbjct: 69  IEDAESSTVIAGSDSEKVAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL 128

Query: 183 PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           PTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 129 PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 157


>ref|XP_021740669.1| 30S ribosomal protein S10 alpha, chloroplastic [Chenopodium quinoa]
          Length = 194

 Score =  168 bits (425), Expect = 3e-50
 Identities = 81/89 (91%), Positives = 85/89 (95%), Gaps = 1/89 (1%)
 Frame = +3

Query: 6   EDG-ETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL 182
           EDG ET+T  +G DSD++APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL
Sbjct: 75  EDGSETSTLSIGTDSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL 134

Query: 183 PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           PTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 135 PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 163


>ref|XP_021771357.1| 30S ribosomal protein S10 alpha, chloroplastic-like [Chenopodium
           quinoa]
 ref|XP_021771361.1| 30S ribosomal protein S10 alpha, chloroplastic-like [Chenopodium
           quinoa]
 ref|XP_021739545.1| 30S ribosomal protein S10 alpha, chloroplastic-like [Chenopodium
           quinoa]
          Length = 194

 Score =  167 bits (422), Expect = 8e-50
 Identities = 80/89 (89%), Positives = 85/89 (95%), Gaps = 1/89 (1%)
 Frame = +3

Query: 6   EDG-ETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL 182
           +DG ET+T  +G DSD++APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL
Sbjct: 75  QDGSETSTLSIGTDSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL 134

Query: 183 PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           PTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 135 PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 163


>gb|PIN16593.1| 40S ribosomal protein S20 [Handroanthus impetiginosus]
          Length = 188

 Score =  166 bits (419), Expect = 2e-49
 Identities = 78/88 (88%), Positives = 83/88 (94%)
 Frame = +3

Query: 6   EDGETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP 185
           E   ++T  +GADSDK+APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP
Sbjct: 70  EGPSSSTLSIGADSDKVAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP 129

Query: 186 TKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           TKKR+YCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 130 TKKRVYCVLKSPHVHKDARFHFEIRTHQ 157


>gb|PIN15995.1| 40S ribosomal protein S20 [Handroanthus impetiginosus]
          Length = 188

 Score =  166 bits (419), Expect = 2e-49
 Identities = 78/88 (88%), Positives = 83/88 (94%)
 Frame = +3

Query: 6   EDGETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP 185
           E   ++T  +GADSDK+APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP
Sbjct: 70  EGPSSSTLSIGADSDKVAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP 129

Query: 186 TKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           TKKR+YCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 130 TKKRVYCVLKSPHVHKDARFHFEIRTHQ 157


>gb|PIN11404.1| 40S ribosomal protein S20 [Handroanthus impetiginosus]
          Length = 185

 Score =  165 bits (417), Expect = 4e-49
 Identities = 79/89 (88%), Positives = 82/89 (92%)
 Frame = +3

Query: 3   VEDGETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL 182
           VE    +T  V ADSDK+APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL
Sbjct: 66  VETLSASTQSVAADSDKVAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL 125

Query: 183 PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           PTKKR+YCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 126 PTKKRVYCVLKSPHVHKDARFHFEIRTHQ 154


>sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, chloroplastic; Flags:
           Precursor
 pdb|3BBN|J Chain J, Homology Model For The Spinach Chloroplast 30s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome.
 gb|AAF64190.1|AF245665_1 plastid ribosomal protein S10 precursor [Mesembryanthemum
           crystallinum]
          Length = 197

 Score =  165 bits (418), Expect = 4e-49
 Identities = 80/90 (88%), Positives = 86/90 (95%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   VEDG-ETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVP 179
           VE+G ET+   +GADSD++APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVP
Sbjct: 77  VEEGSETSALGIGADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVP 136

Query: 180 LPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           LPTKKRI+CVLKSPHVHKDARFHFEIRTHQ
Sbjct: 137 LPTKKRIFCVLKSPHVHKDARFHFEIRTHQ 166


>pdb|5X8R|JJ Chain j, Structure Of The 30s Small Subunit Of Chloroplast Ribosome
           From Spinach
          Length = 122

 Score =  162 bits (411), Expect = 4e-49
 Identities = 79/89 (88%), Positives = 83/89 (93%), Gaps = 1/89 (1%)
 Frame = +3

Query: 6   EDG-ETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL 182
           EDG ET+   + ADSD++APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAK MGPVPL
Sbjct: 3   EDGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKIMGPVPL 62

Query: 183 PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           PTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 63  PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 91


>ref|XP_022843514.1| 30S ribosomal protein S10, chloroplastic-like [Olea europaea var.
           sylvestris]
          Length = 188

 Score =  164 bits (416), Expect = 6e-49
 Identities = 77/79 (97%), Positives = 79/79 (100%)
 Frame = +3

Query: 33  VGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVL 212
           VGADSDK+APKQKIRIKLRSYWVPLIEDSCKQIMDAA+TTNAKTMGPVPLPTKKRIYCVL
Sbjct: 79  VGADSDKMAPKQKIRIKLRSYWVPLIEDSCKQIMDAAKTTNAKTMGPVPLPTKKRIYCVL 138

Query: 213 KSPHVHKDARFHFEIRTHQ 269
           KSPHVHKDARFHFEIRTHQ
Sbjct: 139 KSPHVHKDARFHFEIRTHQ 157


>ref|XP_018825110.1| PREDICTED: 30S ribosomal protein S10, chloroplastic [Juglans regia]
          Length = 205

 Score =  165 bits (417), Expect = 7e-49
 Identities = 78/88 (88%), Positives = 83/88 (94%)
 Frame = +3

Query: 6   EDGETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP 185
           E   T++  +GADSDK+APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP
Sbjct: 87  ETPSTSSLSIGADSDKMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP 146

Query: 186 TKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           TKKRI+CVLKSPHVHKDARFHFEIRTHQ
Sbjct: 147 TKKRIFCVLKSPHVHKDARFHFEIRTHQ 174


>ref|XP_011097778.2| 30S ribosomal protein S10, chloroplastic [Sesamum indicum]
          Length = 168

 Score =  163 bits (413), Expect = 9e-49
 Identities = 78/88 (88%), Positives = 82/88 (93%)
 Frame = +3

Query: 6   EDGETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP 185
           E   ++T  V ADSDK+APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP
Sbjct: 50  EAPSSSTLSVAADSDKVAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLP 109

Query: 186 TKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           TKKR+YCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 110 TKKRVYCVLKSPHVHKDARFHFEIRTHQ 137


>ref|XP_022001522.1| cyanelle 30S ribosomal protein S10-like [Helianthus annuus]
 gb|OTG01996.1| putative ribosomal protein S10 [Helianthus annuus]
          Length = 187

 Score =  164 bits (414), Expect = 1e-48
 Identities = 77/89 (86%), Positives = 82/89 (92%)
 Frame = +3

Query: 3   VEDGETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL 182
           +E  E+   I  +DS+K+APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL
Sbjct: 68  IEGAESTAVIESSDSEKIAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL 127

Query: 183 PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           PTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 128 PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 156


>ref|XP_021608810.1| 30S ribosomal protein S10, chloroplastic-like [Manihot esculenta]
 gb|OAY55247.1| hypothetical protein MANES_03G139700 [Manihot esculenta]
          Length = 209

 Score =  164 bits (415), Expect = 2e-48
 Identities = 76/79 (96%), Positives = 79/79 (100%)
 Frame = +3

Query: 33  VGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVL 212
           +GAD+DK+APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVL
Sbjct: 100 IGADADKMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVL 159

Query: 213 KSPHVHKDARFHFEIRTHQ 269
           KSPHVHKDARFHFEIRTHQ
Sbjct: 160 KSPHVHKDARFHFEIRTHQ 178


>ref|XP_021661870.1| 30S ribosomal protein S10, chloroplastic-like [Hevea brasiliensis]
          Length = 213

 Score =  164 bits (415), Expect = 2e-48
 Identities = 76/79 (96%), Positives = 79/79 (100%)
 Frame = +3

Query: 33  VGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVL 212
           +GAD+DK+APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVL
Sbjct: 104 IGADADKMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVL 163

Query: 213 KSPHVHKDARFHFEIRTHQ 269
           KSPHVHKDARFHFEIRTHQ
Sbjct: 164 KSPHVHKDARFHFEIRTHQ 182


>ref|XP_010675901.1| PREDICTED: 30S ribosomal protein S10, chloroplastic [Beta vulgaris
           subsp. vulgaris]
 gb|KMT12924.1| hypothetical protein BVRB_4g090080 [Beta vulgaris subsp. vulgaris]
          Length = 195

 Score =  163 bits (412), Expect = 3e-48
 Identities = 77/85 (90%), Positives = 81/85 (95%)
 Frame = +3

Query: 15  ETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKK 194
           ET+   + ADSD++APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKK
Sbjct: 80  ETSKLSIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKK 139

Query: 195 RIYCVLKSPHVHKDARFHFEIRTHQ 269
           RIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 140 RIYCVLKSPHVHKDARFHFEIRTHQ 164


>ref|XP_012070989.1| 30S ribosomal protein S10, chloroplastic [Jatropha curcas]
 gb|KDP39259.1| hypothetical protein JCGZ_01016 [Jatropha curcas]
          Length = 213

 Score =  163 bits (413), Expect = 3e-48
 Identities = 79/92 (85%), Positives = 83/92 (90%), Gaps = 3/92 (3%)
 Frame = +3

Query: 3   VEDGETATG---IVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGP 173
           + D ET +     +GAD+DKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAAR TNAKTMGP
Sbjct: 91  IGDSETPSSPSLSIGADADKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGP 150

Query: 174 VPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           VPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 151 VPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 182


>ref|XP_021842640.1| 30S ribosomal protein S10 alpha, chloroplastic [Spinacia oleracea]
 sp|P82162.2|RR10_SPIOL RecName: Full=30S ribosomal protein S10 alpha, chloroplastic;
           AltName: Full=Chloroplastic small ribosomal subunit
           protein uS10c; Contains: RecName: Full=30S ribosomal
           protein S10 beta, chloroplastic; Flags: Precursor
 pdb|5MMJ|JJ Chain j, Structure Of The Small Subunit Of The Chloroplast Ribosome
 pdb|5MMM|JJ Chain j, Structure of the 70S chloroplast ribosome
 gb|KNA23234.1| hypothetical protein SOVF_026730 [Spinacia oleracea]
          Length = 195

 Score =  162 bits (411), Expect = 4e-48
 Identities = 79/89 (88%), Positives = 83/89 (93%), Gaps = 1/89 (1%)
 Frame = +3

Query: 6   EDG-ETATGIVGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPL 182
           EDG ET+   + ADSD++APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAK MGPVPL
Sbjct: 76  EDGSETSKISIAADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKIMGPVPL 135

Query: 183 PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           PTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 136 PTKKRIYCVLKSPHVHKDARFHFEIRTHQ 164


>ref|XP_015056091.1| PREDICTED: 30S ribosomal protein S10, chloroplastic [Solanum
           pennellii]
          Length = 188

 Score =  162 bits (410), Expect = 5e-48
 Identities = 79/90 (87%), Positives = 83/90 (92%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   VEDGETATGI-VGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVP 179
           VED   A+ + +G DSDK APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKT+GPVP
Sbjct: 68  VEDIPAASTLSIGGDSDKAAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTVGPVP 127

Query: 180 LPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           LPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 128 LPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 157


>ref|XP_006352534.1| PREDICTED: 30S ribosomal protein S10, chloroplastic [Solanum
           tuberosum]
          Length = 188

 Score =  162 bits (410), Expect = 5e-48
 Identities = 79/90 (87%), Positives = 83/90 (92%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   VEDGETATGI-VGADSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVP 179
           VED   A+ + +G DSDK APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKT+GPVP
Sbjct: 68  VEDIPAASTLSIGGDSDKAAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTVGPVP 127

Query: 180 LPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 269
           LPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 128 LPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 157


Top