BLASTX nr result

ID: Chrysanthemum22_contig00008491 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00008491
         (946 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI01760.1| hypothetical protein Ccrd_019950 [Cynara carduncu...    52   2e-10

>gb|KVI01760.1| hypothetical protein Ccrd_019950 [Cynara cardunculus var. scolymus]
          Length = 451

 Score = 51.6 bits (122), Expect(2) = 2e-10
 Identities = 30/64 (46%), Positives = 36/64 (56%)
 Frame = -3

Query: 698 MPPNLSPLPAVSYGSRPHQDNGYQKGLAXXXXXXXXXXXXSKTGVLYRIICPFFFIILIT 519
           M PNLSPLPAVSYGS P  +N  QKGLA            + +GVL     P   +IL+ 
Sbjct: 390 MAPNLSPLPAVSYGSLPQPENRKQKGLAPSPLAVLPSSSSAASGVLR----PLLVLILMA 445

Query: 518 VHIL 507
           +HIL
Sbjct: 446 LHIL 449



 Score = 43.1 bits (100), Expect(2) = 2e-10
 Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 17/69 (24%)
 Frame = -2

Query: 885 QNDHMG------PNISPSPGQL-----------APSPDNEPKKYLPPVSNTXXXSITSIC 757
           QNDH+G      P  SPSP  L           +PSP NEP + LPPVSN    ++   C
Sbjct: 289 QNDHVGSTIIPSPATSPSPNSLHLPPCTNCVASSPSPQNEPNQSLPPVSNPPAPAMDPYC 348

Query: 756 TKPSCPPTS 730
                 P+S
Sbjct: 349 GGSDLSPSS 357


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