BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00008260
         (411 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97398.1| CID domain-containing protein [Cynara cardunculus...   113   2e-26
gb|KVH97396.1| CID domain-containing protein, partial [Cynara ca...   108   1e-24
ref|XP_023742741.1| polyadenylation and cleavage factor homolog ...    99   3e-21
ref|XP_022036926.1| polyadenylation and cleavage factor homolog ...    84   4e-16

>gb|KVH97398.1| CID domain-containing protein [Cynara cardunculus var. scolymus]
          Length = 954

 Score =  113 bits (283), Expect = 2e-26
 Identities = 77/189 (40%), Positives = 92/189 (48%), Gaps = 55/189 (29%)
 Frame = -2

Query: 407 HARPPSPSIDEYAMD-------EGTS-SHHGYSHRPYGMAV------------------- 309
           HARPPSP+++E+A+        EG S S+HGY +RP G+                     
Sbjct: 285 HARPPSPALEEFAIADSPRRVVEGASPSYHGYGYRPGGVTAGDDEPRDWRRSHLSGASRQ 344

Query: 308 -------------DIQRPRALIDAYGADERXXXXXXXXNMRHVKNSTINGLSSKVGXXXX 168
                        DIQRPR LI+AYG DER         ++HVKN TINGL SKVG    
Sbjct: 345 LEASTTHSVSNGFDIQRPRDLINAYGTDERNKTTNQK--LQHVKNLTINGLGSKVGGQTW 402

Query: 167 XXXXXXXXXXEDMSPTLAGHG---------------HAFGANRSMPRKNDFSRTNWSNQE 33
                     EDMSPTLA  G               HA GANRS+P K DF R +WS+QE
Sbjct: 403 QNAEEEEFEWEDMSPTLADRGRGGDLFSLPGSSKAGHARGANRSIPTKTDFGRRDWSSQE 462

Query: 32  MLPSVVLNN 6
           +LPSV  NN
Sbjct: 463 LLPSVAPNN 471


>gb|KVH97396.1| CID domain-containing protein, partial [Cynara cardunculus var.
           scolymus]
          Length = 1024

 Score =  108 bits (270), Expect = 1e-24
 Identities = 74/183 (40%), Positives = 86/183 (46%), Gaps = 47/183 (25%)
 Frame = -2

Query: 410 GHARPPSPSIDEYAMD-------EGTSSHHGYSHRPYGMAV------------------- 309
           GHARPPSPS+DE+A+D       EGTSS H Y  RP+GMAV                   
Sbjct: 352 GHARPPSPSLDEFALDDSPKKVVEGTSSSHEYGRRPHGMAVKDEDLRDWQRPQQSDGALP 411

Query: 308 --------------DIQRPRALIDAYGADERXXXXXXXXNMRHVKNSTINGLSSKVGXXX 171
                         DIQRPRALIDAYG DER         ++H KN   NGL  K     
Sbjct: 412 QIETTASHCISNGFDIQRPRALIDAYGTDER--NKTTNPKLQHTKNLITNGLGGKSAGQT 469

Query: 170 XXXXXXXXXXXEDMSPTLAGHG-------HAFGANRSMPRKNDFSRTNWSNQEMLPSVVL 12
                      E+MSPTL   G        A+ AN+S   K D SR NWSNQE++ SV  
Sbjct: 470 WQNTEEEEFEWENMSPTLVDRGPATDPAPGAYRANQSTFAKTDLSRGNWSNQELIHSVAP 529

Query: 11  NNA 3
           N+A
Sbjct: 530 NHA 532


>ref|XP_023742741.1| polyadenylation and cleavage factor homolog 4 [Lactuca sativa]
 gb|PLY66896.1| hypothetical protein LSAT_7X17321 [Lactuca sativa]
          Length = 883

 Score = 98.6 bits (244), Expect = 3e-21
 Identities = 66/161 (40%), Positives = 82/161 (50%), Gaps = 25/161 (15%)
 Frame = -2

Query: 410 GHARPPSPSIDEYAMDEG----------TSSHHGYSHRP--------YGMAV----DIQR 297
           GH RPPSP+++++ M +           + SHHGY +RP        +G+AV    D+QR
Sbjct: 283 GHTRPPSPALEDFPMIDSPKRVVEVASPSPSHHGYGYRPPSGSGSGTHGVAVSNGFDVQR 342

Query: 296 PRALIDAYGADERXXXXXXXXNMRHVKNSTINGLSSKVGXXXXXXXXXXXXXXEDMSPTL 117
           PRALI AYG DER          +H KN   NGL SK G              EDMSPTL
Sbjct: 343 PRALISAYGTDERNKMINQNH--QHGKNLNTNGLGSKGGVLTWQNAEEEEFEWEDMSPTL 400

Query: 116 AG---HGHAFGANRSMPRKNDFSRTNWSNQEMLPSVVLNNA 3
           AG    G   G NR+      F R +WS+QE +PSV  NNA
Sbjct: 401 AGSSKRGQMVGPNRT-----GFGRGDWSSQERVPSVASNNA 436


>ref|XP_022036926.1| polyadenylation and cleavage factor homolog 4 [Helianthus annuus]
 ref|XP_022036927.1| polyadenylation and cleavage factor homolog 4 [Helianthus annuus]
 gb|OTG23823.1| putative PCF11P-similar protein 4 [Helianthus annuus]
          Length = 886

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 65/182 (35%), Positives = 79/182 (43%), Gaps = 46/182 (25%)
 Frame = -2

Query: 410 GHARPPSPSIDEYAMD-------EGTS-SHHGYSHRPYGMAV------------------ 309
           GH RP SP+++EY+M        EG S S HGY +R   +                    
Sbjct: 270 GHPRPRSPALEEYSMADSPKRVVEGASPSRHGYDYRTGSVTAGDEDLRDWRRSHVVSNGY 329

Query: 308 DIQRPRALIDAYGADERXXXXXXXXNMRHVKNSTINGLS--SKVGXXXXXXXXXXXXXXE 135
           D+QRPR LI+AYG DER          +H KN TINGL   SK G              E
Sbjct: 330 DVQRPRDLINAYGTDERNKTTTQKS--QHGKNLTINGLGLGSKAGGMTWQNAEEEEFEWE 387

Query: 134 DMSPTLAGHGHA------------------FGANRSMPRKNDFSRTNWSNQEMLPSVVLN 9
           +MSPTLA  G                       NRSMP K DF R +WSN E++ S   N
Sbjct: 388 NMSPTLADRGRGTDLFSSVPLPGSSKMGQPLQVNRSMPTKTDFGRGDWSNHELISSANHN 447

Query: 8   NA 3
           +A
Sbjct: 448 SA 449