BLASTX nr result

ID: Chrysanthemum22_contig00008186 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00008186
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI08423.1| Thioredoxin [Cynara cardunculus var. scolymus]          65   1e-09
ref|XP_023768969.1| thioredoxin-like 1-1, chloroplastic [Lactuca...    54   9e-06

>gb|KVI08423.1| Thioredoxin [Cynara cardunculus var. scolymus]
          Length = 310

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 44/108 (40%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
 Frame = +1

Query: 160 KMAEVIGKISISSSNYYRGNNYLCDKMKKLSPV----------RASLNVRSQAASXXXXX 309
           KMAE+IGKIS +       ++Y  + +KKLSPV          RASL VRS A       
Sbjct: 66  KMAEIIGKISSNYRFSASNHDYSRENLKKLSPVMIKMPAFSSLRASLTVRSSAGGEIFDP 125

Query: 310 XXXXXXXXXXXXXXCIQAVAAANAKMSIGIKKPVRWWEKGLKPNMKEV 453
                                 N KMS GI K V+WWEKG+KPNMKEV
Sbjct: 126 R--------------------VNVKMSNGIGKSVKWWEKGIKPNMKEV 153


>ref|XP_023768969.1| thioredoxin-like 1-1, chloroplastic [Lactuca sativa]
 gb|PLY81524.1| hypothetical protein LSAT_2X58761 [Lactuca sativa]
          Length = 266

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 37/107 (34%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
 Frame = +1

Query: 163 MAEVIGKISISSSNYYRGNNYLCDKMKKLSPV----------RASLNVRSQAASXXXXXX 312
           M +VIGKIS S       N+  CD+ KK+S V          RAS  +RS A +      
Sbjct: 1   MVDVIGKISRSFKFSACNNDNACDRFKKISSVMIQMPAFSNLRASSTIRSSAGTKTID-- 58

Query: 313 XXXXXXXXXXXXXCIQAVAAANAKMSIGIKKPVRWWEKGLKPNMKEV 453
                          +       +  I I K ++WWEKGLKPNMKEV
Sbjct: 59  ---------------RRTVVGGQQRGISIGKALKWWEKGLKPNMKEV 90


Top