BLASTX nr result
ID: Chrysanthemum22_contig00007755
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00007755
(4394 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 1654 0.0
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 1417 0.0
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 1406 0.0
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 1391 0.0
gb|ABW74566.1| integrase [Boechera divaricarpa] 1279 0.0
gb|OTG34809.1| putative zinc finger, CCHC-type [Helianthus annuus] 1202 0.0
gb|AIC77183.1| polyprotein [Gossypium barbadense] 1158 0.0
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo... 1148 0.0
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo... 1148 0.0
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo... 1147 0.0
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 1145 0.0
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 1144 0.0
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 1142 0.0
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 1077 0.0
gb|KYP39674.1| Retrovirus-related Pol polyprotein from transposo... 1031 0.0
gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao] 1026 0.0
gb|PPD66864.1| hypothetical protein GOBAR_DD36257 [Gossypium bar... 1018 0.0
gb|ACN78973.1| copia-type polyprotein [Glycine max] >gi|22501615... 950 0.0
dbj|GAU26309.1| hypothetical protein TSUD_56070 [Trifolium subte... 942 0.0
gb|KYP38330.1| Retrovirus-related Pol polyprotein from transposo... 936 0.0
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 1654 bits (4282), Expect = 0.0
Identities = 817/1342 (60%), Positives = 999/1342 (74%), Gaps = 8/1342 (0%)
Frame = +1
Query: 127 MAMNGTSASSQPLIPIFRGENYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQPNQQLRD 306
MA NGT+ASSQPLIPIFRGENY FWSLKM T+FKSQELWD++E G PE Q+R+
Sbjct: 1 MAGNGTAASSQPLIPIFRGENYQFWSLKMKTLFKSQELWDIVETGI----PEGNANQMRE 56
Query: 307 NRKKDAKALFFIQQAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFE 486
+RK+D+KALF IQQA+DD IFPRI LKQEY GD KVI VK+QTLRR+FE
Sbjct: 57 HRKRDSKALFTIQQALDDEIFPRISAVETSKQAWEILKQEYFGDDKVITVKLQTLRRDFE 116
Query: 487 TLGMQKNEKVQEYLSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKD 666
TL M +NE VQ YLSR S IVN M+S+GE + N+ +V KVLRSL KF+HVV AIEESKD
Sbjct: 117 TLFMNENESVQGYLSRTSAIVNRMRSYGEKIDNQIVVSKVLRSLTTKFEHVVTAIEESKD 176
Query: 667 LSAYTFDELMGSLLAHEDRLSRPHENVDEKVFQVKGDSSHKGKAEXXXXXXXXXXXXXXX 846
LS Y+FDELM SLLAHEDRL+R E V EK FQVKG+ S+KGKAE
Sbjct: 177 LSTYSFDELMSSLLAHEDRLNRSREKVQEKAFQVKGEFSYKGKAENSAGRGHGRGNFRGR 236
Query: 847 XXXXXXXXX-PAGDQRDFKSTIQCRHCNKPGHKDVDCWFKPKDEQKHAKFAEKSQEESYL 1023
G+ R +KS IQCR+C K GHK+VDCW K KDEQK A F + +EES L
Sbjct: 237 GRGGSGRGRNQVGEFRQYKSNIQCRYCKKFGHKEVDCWTKQKDEQKDANFTQNVEEESKL 296
Query: 1024 FMVQSTKQGVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGNDKLIKVEGRGTVA 1203
FM S N VW++DSGCSNHMS KS+F+D+DE QKSEV LG+DK + +EG+GTV
Sbjct: 297 FMASSQITESANAVWFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVE 356
Query: 1204 IKTSLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKEKVSGTTLFDVPM 1383
IKT G+ K ++DVQY P LAHNLLSVGQLM +GYS++F D C IK+K SG T+ VPM
Sbjct: 357 IKTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPM 416
Query: 1384 MSNRMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXXNMVHGLPKIDNV 1563
N+MFPLD+S+ GN A+V +E E N WHLRYGH +MV GLP I +
Sbjct: 417 TQNKMFPLDISNV-GNSALVVKEKNETNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIKEL 475
Query: 1564 DFCEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGSRYFMLFVDDYSRM 1743
D CEGC+YGKQ+R +FPVGKS RA+ CLEL+H+DLCGPM +ESLGGSRYF++F DDYSR
Sbjct: 476 DLCEGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSRF 535
Query: 1744 SWVYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEFNTFCEDNGIHREL 1923
SWVYFLK KSE F+ FK FKA VE QSG IK+LRTDRGGE+LS +FN FCE+NGI REL
Sbjct: 536 SWVYFLKFKSETFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRREL 595
Query: 1924 TTPYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYILNISPTKAVYNRT 2103
T PYTP+QNGVAERKNRT+VEM RS + A+G+P +FW EAVAT VY LNISPTK V+N T
Sbjct: 596 TAPYTPEQNGVAERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVWNTT 655
Query: 2104 PFEAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYSTQSKGYKLYDPVN 2283
P EAW G KP VSHLRIFGC+AYALVN S KLDEKS KC+FVGYS QSK Y+LY+P++
Sbjct: 656 PLEAWNGKKPRVSHLRIFGCIAYALVNFHS--KLDEKSTKCIFVGYSLQSKAYRLYNPIS 713
Query: 2284 GKSLISRDVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFD-------TPVVHXXXXXXXX 2442
GK +ISR+VVFNE+ SWNF S S+ ++ + ++ D +PV
Sbjct: 714 GKVIISRNVVFNEDVSWNFNSGNMMSNIQLLPTDEESAVDFGNSPNSSPV---SSSVSSP 770
Query: 2443 XXXXXXXXXXXXXXXXXXXXXXDDEAEPRYKSLHDIYASCSFALFVTEPACFKEANEVAE 2622
E +P K + + SC FAL V++P C++EA E +E
Sbjct: 771 IAPSTTVAPDESSVEPIPLRRSTREKKPNPKYSNTVNTSCQFALLVSDPICYEEAVEQSE 830
Query: 2623 WKEAMLDELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSVKRYKARLVAKGYSQ 2802
WK AM++E++AIE N TWELV PEGK IGLKWVF+ K+NADGS++++KARLVAKGYSQ
Sbjct: 831 WKNAMIEEIQAIERNSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQ 890
Query: 2803 HQGIDYDETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGELQEEVYVSQPEGFE 2982
QG+D+DETFSPVARFETVR++L++AA L+ PVYQFDVKSAFLNG+L+EEVYVSQP+GF
Sbjct: 891 QQGVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFM 950
Query: 2983 VCGNEHKFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPTLYVKRAGKNDFLVV 3162
+ GNE+K YKL+KALYGLKQAPRAWY ++DS+F +GF RS+NEPTLY+K+ G ++FL+V
Sbjct: 951 ITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEFLLV 1010
Query: 3163 VIYVDDMIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQETSGIFLSQSKYAK 3342
+YVDDMIY+GS++SL++DFKS+M FEM+DLG L+YFLGLEV Q+ GIF+SQ KYA+
Sbjct: 1011 CLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFISQKKYAE 1070
Query: 3343 DLLVKFNMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLNYLTHTRPDIMYSVN 3522
DLL KF M NC+ TPM NEKLQ DGTE NP L+RS++GGLNYLTHTRPDI +SV+
Sbjct: 1071 DLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVS 1130
Query: 3523 VLSRFMHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYSDSDWGGCVDNRKST 3702
V+SRF+ PT+ H GAAKRVLRYVAGT DFG+WYSK N + G++DSD+ GC+D+RKST
Sbjct: 1131 VVSRFLQSPTKQHFGAAKRVLRYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKST 1190
Query: 3703 SGQVFYLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRRMLVDFHNEQYGPTT 3882
SG F GS V+WSSKKQ+ VALS+SEAEY A + AA QA+WLR++L DF EQ T
Sbjct: 1191 SGSCFSFGSGVVTWSSKKQETVALSTSEAEYTAASLAARQALWLRKLLEDFSYEQKESTE 1250
Query: 3883 IFCDNKATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIELKYCPTNEQVADVFTKALS 4062
IF D+K+ IAM +NP+FH RTKHID+++HFIR L ++G I LK+C TNEQ AD+FTK+L
Sbjct: 1251 IFSDSKSAIAMAKNPSFHGRTKHIDVQYHFIRTLVADGRIVLKFCSTNEQAADIFTKSLP 1310
Query: 4063 QAKHDYFRQELGVCKFRARGCI 4128
QAKH+YFR +LGVC F +RG +
Sbjct: 1311 QAKHEYFRLQLGVCDFESRGSV 1332
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 1417 bits (3667), Expect = 0.0
Identities = 717/1297 (55%), Positives = 912/1297 (70%), Gaps = 12/1297 (0%)
Frame = +1
Query: 154 SQPLIPIFRGENYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQPNQQLRDNRKKDAKAL 333
SQP IPIF+GE Y FWS+KM T+FKSQ+LWDL+ENG+ +P++ +L++N KKD+KAL
Sbjct: 12 SQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGYP--YPDE-EARLKENTKKDSKAL 68
Query: 334 FFIQQAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQKNEK 513
FFIQQAV + IF +I LK + G KVI VK+Q+LRR+FETL M+ E
Sbjct: 69 FFIQQAVHESIFSKIAAXTTAKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHMKNGES 128
Query: 514 VQEYLSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTFDEL 693
VQ++LSRV+ IVN M+S+GE + ++T+V KVLRSL PKFDHVVAAIEESKDLS Y+FDEL
Sbjct: 129 VQDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDEL 188
Query: 694 MGSLLAHEDRLSRPHENVDEKVFQVKGDSSHKGKAEXXXXXXXXXXXXXXXXXXXXXXXX 873
MGSL +HE RLSR E +EK F KG++S
Sbjct: 189 MGSLQSHEVRLSRTEEKNEEKXFYTKGETS------------------------------ 218
Query: 874 PAGDQRDFKSTIQCRHCNKPG------------HKDVDCWFKPKDEQKHAKFAEKSQEES 1017
DQ++ R C + G +CW K + E K A + E+ +++
Sbjct: 219 ---DQKNGGREATGRGCGRGGAHGRGGRGRGRGDAQXECWKKERQE-KQANYVEQEEDQV 274
Query: 1018 YLFMVQSTKQGVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGNDKLIKVEGRGT 1197
LFM + + N++W++DSGCSNHM+GIKS+FK++DE K +V LG+DK ++VEG+GT
Sbjct: 275 KLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVQVEGKGT 334
Query: 1198 VAIKTSLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKEKVSGTTLFDV 1377
A+ G+ KL+++V + P L NLLSVGQLM +GYS+LFD C IK+K S + +V
Sbjct: 335 XAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVBV 394
Query: 1378 PMMSNRMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXXNMVHGLPKID 1557
M +N++FPL+VSS E + A+V +E +E+N WHLRYGH MV GLPKID
Sbjct: 395 RMAANKLFPLEVSSIEKH-ALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKID 453
Query: 1558 NVDFCEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGSRYFMLFVDDYS 1737
+V+ CEGC+YGKQS+ FP G+SRRAS CLE+IH+DLCGPM S GGSRYF+LF DD+S
Sbjct: 454 SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHS 513
Query: 1738 RMSWVYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEFNTFCEDNGIHR 1917
RMSWVYFL+SK+E F+ FK FKA VEKQSG IK LRTDRGGE+LS +F F E+ G+HR
Sbjct: 514 RMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVFXEEEGLHR 573
Query: 1918 ELTTPYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYILNISPTKAVYN 2097
ELTTPY+P QNGVAERKNRT+VEM RSMM A+ + HFWAE VATAVY+LNISPTKAV N
Sbjct: 574 ELTTPYSPXQNGVAERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAVLN 633
Query: 2098 RTPFEAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYSTQSKGYKLYDP 2277
RTP+EAW G KP VSHL++FG VAY L++S +R KLDEKS KC+F+GY +QSKGYKLY+P
Sbjct: 634 RTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNP 693
Query: 2278 VNGKSLISRDVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXXXXXXXXXXXXX 2457
V+GK ++SR+VVF+E+ SW + E + +I SS+ +V +
Sbjct: 694 VSGKIIVSRNVVFDEKASWTWRVSEDGALVEI--SSESEVAQS----------------- 734
Query: 2458 XXXXXXXXXXXXXXXXXDDEAEPRYKSLHDIYASCSFALFVTEPACFKEANEVAEWKEAM 2637
++ +P S + T+P F+EA E EW AM
Sbjct: 735 ------------------EDQQP------------SXQIPATDPTTFEEAVEKEEWCSAM 764
Query: 2638 LDELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSVKRYKARLVAKGYSQHQGID 2817
+E+ AIE N TWELV LPE K IG+KWVF+ K+ ADGS++++KARLVAKGY+Q G+D
Sbjct: 765 KEEIAAIEKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVD 824
Query: 2818 YDETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGELQEEVYVSQPEGFEVCGNE 2997
YD+TFSPVARFETVR LL++AA +++ YQFDVKSAFLNGEL EEVYVSQ EGF V E
Sbjct: 825 YDDTFSPVARFETVRTLLALAAHMHWCXYQFDVKSAFLNGELVEEVYVSQXEGFIVPXKE 884
Query: 2998 HKFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPTLYVKRAGKNDFLVVVIYVD 3177
Y+LKKALYGLKQAPRAWY ++DSYF++NGF RS++EP LY+KR GKND L++ +YVD
Sbjct: 885 EHVYRLKKALYGLKQAPRAWYSKIDSYFVENGFERSKSEPNLYLKRQGKNDLLIICLYVD 944
Query: 3178 DMIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQETSGIFLSQSKYAKDLLVK 3357
DMIYMGS+ SLI++FK+ M+ +FEM++LG L +FL LEVKQ G+F+SQ KY DLL K
Sbjct: 945 DMIYMGSSSSLINEFKACMKKKFEMSBLGLLHFFLXLEVKQVEDGVFVSQRKYXVDLLKK 1004
Query: 3358 FNMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLNYLTHTRPDIMYSVNVLSRF 3537
FNM NCK V T M +NEKLQ EDGTE + + S++ GL YLTHTRPDI + V V+SRF
Sbjct: 1005 FNMLNCKVVATXMNSNEKLQAEDGTERADARRFXSLVRGLIYLTHTRPDIAFPVEVISRF 1064
Query: 3538 MHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYSDSDWGGCVDNRKSTSGQVF 3717
MH P++ HLGAAKR+LRY+ GT DFG+WY + GY+DSDW GC+++RKSTSG +F
Sbjct: 1065 MHCPSKQHLGAAKRLLRYIVGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMF 1124
Query: 3718 YLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRRMLVDFHNEQYGPTTIFCDN 3897
LGS AV WSSKKQ V ALSSSEAEY A S+ACQA+WLRR+L D + E PT I+CDN
Sbjct: 1125 SLGSGAVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRRILADINQEHEEPTVIYCDN 1184
Query: 3898 KATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIEL 4008
KA IAMT+NPA+H RTKH+DIR HFIRDL EG ++
Sbjct: 1185 KAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGYADI 1221
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 1406 bits (3639), Expect = 0.0
Identities = 717/1328 (53%), Positives = 918/1328 (69%), Gaps = 8/1328 (0%)
Frame = +1
Query: 172 IFRGENYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQPNQQLRDNRKKDAKALFFIQQA 351
+ GE Y FWS+KM T+FKSQ+LWDL+ENG+ +P++ +L++N KKD+KALFFIQQA
Sbjct: 132 VVEGECYEFWSIKMKTLFKSQDLWDLVENGYP--YPDE-EARLKENTKKDSKALFFIQQA 188
Query: 352 VDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQKNEKVQEYLS 531
+ + IF +I L+ + G KVI VK+Q+LRR+FETL M+ E Q++LS
Sbjct: 189 IHESIFSKIAVATTAKEAWTTLETAFQGSSKVITVKLQSLRRDFETLHMKNGESXQDFLS 248
Query: 532 RVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTFDELMGSLLA 711
RV+ IVN M+S+GE + ++T+V KVLRSL PKFDHVVA IEESKDLS Y+FDELMGSL +
Sbjct: 249 RVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAXIEESKDLSTYSFDELMGSLQS 308
Query: 712 HEDRLSRPHENVDEKVFQVKGDSSH-KGKAEXXXXXXXXXXXXXXXXXXXXXXXXPAGDQ 888
HE RLS + +EK F KG++S K GDQ
Sbjct: 309 HEVRLSXTEDKNEEKXFYTKGETSDXKNGGREXTGRGRGRGGAHGRGGRGRGRGDAQGDQ 368
Query: 889 RDF------KSTIQCRHCNKPGHKDVDCWFKPKDEQKHAKFAEKSQEESYLFMVQSTKQG 1050
R KS I C +C + GH +CW K + E K A + E+ +++ LFM + +
Sbjct: 369 RQSTEKSRNKSNIXCYYCKRFGHVQAECWKKERQE-KQANYVEQEEDQVKLFMAYNEEVV 427
Query: 1051 VLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGNDKLIKVEGRGTVAIKTSLGHTK 1230
N++W++DSGCSNHM+GIKS+FK++DE K V LG+D ++VEG+GTVA+ G+ K
Sbjct: 428 SSNNIWFLDSGCSNHMTGIKSLFKELDESHKLXVKLGDDXQVQVEGKGTVAVNNGHGNVK 487
Query: 1231 LVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKEKVSGTTLFDVPMMSNRMFPLD 1410
L+++V + P L L+ G + +K S + DV M +N++FPL+
Sbjct: 488 LLYNVYFIPSLTEKLVKCG----------------ATYDKKSDQIIVDVRMAANKLFPLE 531
Query: 1411 VSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXXNMVHGLPKIDNVDFCEGCVYG 1590
VSS E + A+V +E +E+N WHLRYGH MV LPKID+V+ CEGC+YG
Sbjct: 532 VSSIEKH-ALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFELPKIDSVNVCEGCIYG 590
Query: 1591 KQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGSRYFMLFVDDYSRMSWVYFLKSK 1770
KQS+ FP G+SRRAS CLE+IH+DLCGPM S GGSRYF+LF DD+SRMSWVYFL+SK
Sbjct: 591 KQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSK 650
Query: 1771 SEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEFNTFCEDNGIHRELTTPYTPQQN 1950
+E F+ FK FKA VEKQSG IK LRTDR GE+LS +F FCE+ G+HRELTTPY+P+QN
Sbjct: 651 AETFETFKKFKAFVEKQSGKCIKVLRTDRXGEFLSNDFKVFCEEEGLHRELTTPYSPEQN 710
Query: 1951 GVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYILNISPTKAVYNRTPFEAWRGTK 2130
GVAERKNRT+VEM RSMM A+ + HFWAE VATAVY+LNISPTKAV NRTP+EAW G K
Sbjct: 711 GVAERKNRTVVEMARSMMXAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRK 770
Query: 2131 PEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYSTQSKGYKLYDPVNGKSLISRDV 2310
P VSHL++FG VAY L +S +R KLDEKS KC+F+GY +QSKGYKLY+PV+GK ++SR+V
Sbjct: 771 PWVSHLKVFGSVAYTLXBSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNV 830
Query: 2311 VFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXXXXXXXXXXXXXXXXXXXXXXXX 2490
VF+E+ S + E + +I SS+ ++ +
Sbjct: 831 VFDEKASXTWRVSEDGALVEI--SSESEMAQSE--DQQPSVQIPXSPTPSHSPSSPNLSX 886
Query: 2491 XXXXXXDDEAEPR-YKSLHDIYASCSFALFVTEPACFKEANEVAEWKEAMLDELKAIEHN 2667
+E PR ++SL DIY + LFV +P F+EA E EW AM +E+ AIE N
Sbjct: 887 SSSSQSSEETPPRKFRSLRDIYETTQ-VLFVADPTTFEEAVEKEEWCSAMKEEIAAIEKN 945
Query: 2668 HTWELVTLPEGKTPIGLKWVFKIKHNADGSVKRYKARLVAKGYSQHQGIDYDETFSPVAR 2847
TWELV LPE K IG+KWVF+ K+ ADGS++++KARLVAKGY+Q G+DYD+TFSPVAR
Sbjct: 946 ETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVAR 1005
Query: 2848 FETVRILLSIAAMLNYPVYQFDVKSAFLNGELQEEVYVSQPEGFEVCGNEHKFYKLKKAL 3027
FETVR LL++AA +++ VYQFDVKSAFLNGEL EEVY SQPEGF V E Y+LK AL
Sbjct: 1006 FETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLKXAL 1065
Query: 3028 YGLKQAPRAWYKRVDSYFLKNGFLRSENEPTLYVKRAGKNDFLVVVIYVDDMIYMGSNES 3207
YGLKQAPRAWY ++DSYF++NGF +S++EP LY+KR GKND L++ +YVDDMIYMGS+ S
Sbjct: 1066 YGLKQAPRAWYSKIDSYFVENGFEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSS 1125
Query: 3208 LIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQETSGIFLSQSKYAKDLLVKFNMHNCKAVG 3387
LI++FK+ M+ +FEM+DLG L +FLGLEVKQ G+F+SQ KYA DLL KFNM NCK V
Sbjct: 1126 LINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCKVVA 1185
Query: 3388 TPMITNEKLQVEDGTEAVNPSLYRSIIGGLNYLTHTRPDIMYSVNVLSRFMHKPTRLHLG 3567
PM +NEKLQ EDGTE + +RS++GGL YLTHTRPDI ++V V+SRFMH P++ HLG
Sbjct: 1186 IPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLG 1245
Query: 3568 AAKRVLRYVAGTVDFGLWYSKTTNGTMYGYSDSDWGGCVDNRKSTSGQVFYLGSTAVSWS 3747
A KR+LRY+AGT DF +W + GY+DSDW GC+++RKSTSG +F LGS
Sbjct: 1246 ATKRLLRYIAGTYDFRIWXGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGS------ 1299
Query: 3748 SKKQDVVALSSSEAEYIAVASAACQAIWLRRMLVDFHNEQYGPTTIFCDNKATIAMTRNP 3927
AEY S+ACQA+WLRR+L D + E PT I+CDNKA IAMT+NP
Sbjct: 1300 -------------AEYTVATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNP 1346
Query: 3928 AFHSRTKHIDIRFHFIRDLTSEGIIELKYCPTNEQVADVFTKALSQAKHDYFRQELGVCK 4107
A+H RTKH+DIR HFIRDL EG + L+YC TNEQVADV TKALS+ KH YFR +LGVC
Sbjct: 1347 AYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGVCN 1406
Query: 4108 FRARGCIE 4131
F +R +E
Sbjct: 1407 FESRRSVE 1414
Score = 168 bits (426), Expect = 3e-38
Identities = 83/153 (54%), Positives = 98/153 (64%)
Frame = +1
Query: 3538 MHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYSDSDWGGCVDNRKSTSGQVF 3717
MH ++ HLGAA R+LRY+AGT DF +WY + GY+DSDW G V
Sbjct: 1 MHCSSKQHLGAAXRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGXV----------- 49
Query: 3718 YLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRRMLVDFHNEQYGPTTIFCDN 3897
W SKKQ V LSSSEAEY A S+ACQA+WLRR+L D + E T I+CDN
Sbjct: 50 -------CWXSKKQAVTXLSSSEAEYTAXTSSACQAVWLRRILXDINQEHEEXTVIYCDN 102
Query: 3898 KATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEG 3996
KA IAMT+NPA+H RTKH+DIR HFIRDL EG
Sbjct: 103 KAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEG 135
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 1391 bits (3601), Expect = 0.0
Identities = 719/1341 (53%), Positives = 910/1341 (67%), Gaps = 9/1341 (0%)
Frame = +1
Query: 136 NGTSAS-SQPLIPIFRGENYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQPNQQLRDNR 312
NG+ S SQP IPIF+GE Y FWS+KM T+FKSQ+LWDL+ENG+ +P++ +L++N
Sbjct: 5 NGSMVSVSQPTIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGYP--YPDE-EARLKENT 61
Query: 313 KKDAKALFFIQQAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETL 492
KKD+KALFFIQQAV + IF +I LK + G KVI VK+Q+LRR+FETL
Sbjct: 62 KKDSKALFFIQQAVHESIFSKIAAATTAKEAWTTLKTAFQGSSKVITVKLQSLRRDFETL 121
Query: 493 GMQKNEKVQEYLSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLS 672
M+ E +Q++ F +++ ++T+V KVLRSL PKFDHVVAAIEESKDLS
Sbjct: 122 HMKNGESMQDF-------------FVKNILDQTVVAKVLRSLTPKFDHVVAAIEESKDLS 168
Query: 673 AYTFDELMGSLLAHEDRLSRPHENVDEKVFQVKGDSS-HKGKAEXXXXXXXXXXXXXXXX 849
Y+FDELMGSL +HE RLSR E +EK F KG++S K
Sbjct: 169 TYSFDELMGSLQSHEVRLSRTEEKNEEKAFYTKGETSDQKNGGREATGRGRGRGGAHGRG 228
Query: 850 XXXXXXXXPAGDQRDF------KSTIQCRHCNKPGHKDVDCWFKPKDEQKHAKFAEKSQE 1011
G QR KS IQC +C + GH +CW K + E K A + E+ ++
Sbjct: 229 GRGRGRGDAQGYQRQSTEKNRNKSNIQCYYCKRFGHVQXECWKKERQE-KQANYVEQEED 287
Query: 1012 ESYLFMVQSTKQGVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGNDKLIKVEGR 1191
+ LFM + + N++W++DSGCSNHM+GIKS+FK++DE K +V LG+DK + VEG+
Sbjct: 288 QVKLFMXYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGK 347
Query: 1192 GTVAIKTSLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKEKVSGTTLF 1371
G +A+ G+ KL+++V + P L NLLSVGQLM +GYS+LFD C IK+K S +
Sbjct: 348 GIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIV 407
Query: 1372 DVPMMSNRMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXXNMVHGLPK 1551
+V M +N++FPL+VSS E + A+V +E +E+N WHLRYGH MV GLPK
Sbjct: 408 NVRMAANKLFPLEVSSIEKH-ALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPK 466
Query: 1552 IDNVDFCEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGSRYFMLFVDD 1731
ID+V+ CEGC+YGKQS+ FP G+SRRAS CLE+IH+DLCGPM S GGSRYF+LF DD
Sbjct: 467 IDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDD 526
Query: 1732 YSRMSWVYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEFNTFCEDNGI 1911
+SRMSWVYFL+SK+E F+ FK FKA VEKQSG IK LRTDRGGE+LS +F FCE+ G+
Sbjct: 527 HSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGL 586
Query: 1912 HRELTTPYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYILNISPTKAV 2091
HRELTTPY+P+QNGVAERKNRT+VEM RSMM A+ + HFWAE VATAVY+LNISPTKAV
Sbjct: 587 HRELTTPYSPEQNGVAERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAV 646
Query: 2092 YNRTPFEAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYSTQSKGYKLY 2271
NRTP+EAW G KP VSHL++FG VAY L++S + LDEKS KC+F+GY +QSKGYKLY
Sbjct: 647 LNRTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHNHSNLDEKSIKCIFIGYCSQSKGYKLY 706
Query: 2272 DPVNGKSLISRDVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXXXXXXXXXXX 2451
+PV+GK ++SR+VV +E+ SW + E + +I SS+ +V +
Sbjct: 707 NPVSGKIIVSRNVVXDEKASWTWRVSEDGALVEI--SSESEVAQSE--DQQPSVQIPAXP 762
Query: 2452 XXXXXXXXXXXXXXXXXXXDDEAEPR-YKSLHDIYASCSFALFVTEPACFKEANEVAEWK 2628
+E PR ++SL DIY + LFV +P F+EA E EW
Sbjct: 763 TPSHSPSSPNLSSSSSSQSSEETPPRKFRSLRDIYETTQ-VLFVADPTTFEEAVEKEEWC 821
Query: 2629 EAMLDELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSVKRYKARLVAKGYSQHQ 2808
AM +E+ AIE N TWELV LPE K IG+KWVF+ K+ ADGS++++KARLVAKGY+Q
Sbjct: 822 SAMKEEIVAIEKNETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQH 881
Query: 2809 GIDYDETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGELQEEVYVSQPEGFEVC 2988
G+DYD+TFSPVARFET PEGF V
Sbjct: 882 GVDYDDTFSPVARFET-------------------------------------PEGFIVP 904
Query: 2989 GNEHKFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPTLYVKRAGKNDFLVVVI 3168
E Y+LKKALYGLKQAPRAWY ++DSYF++NGF RS++EP LY+KR
Sbjct: 905 SKEEHVYRLKKALYGLKQAPRAWYSKIDSYFVENGFKRSKSEPNLYLKRQ---------- 954
Query: 3169 YVDDMIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQETSGIFLSQSKYAKDL 3348
DDMIYMGS+ LI++FK+ M+ +FEM+ LG L FLGLEVKQ G+F+SQ KYA DL
Sbjct: 955 --DDMIYMGSSSXLINEFKACMKKKFEMSXLGLLHXFLGLEVKQVEDGVFVSQRKYAVDL 1012
Query: 3349 LVKFNMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLNYLTHTRPDIMYSVNVL 3528
L KFNM NCK V TPM +NEKLQ EDGTE + +RS++GGL YLTHTRPDI ++V V+
Sbjct: 1013 LKKFNMLNCKVVATPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVI 1072
Query: 3529 SRFMHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYSDSDWGGCVDNRKSTSG 3708
SRFMH P++ HLGAAKR+LRY+AGT DFG+WY + GY+DSDW GC+++RKS SG
Sbjct: 1073 SRFMHCPSKQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKSXSG 1132
Query: 3709 QVFYLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRRMLVDFHNEQYGPTTIF 3888
+F LGS AV WSSKKQ V ALSS EAEY A S+ CQA+WLRR+L D + E PT I+
Sbjct: 1133 YMFSLGSGAVCWSSKKQAVTALSSXEAEYTAATSSXCQAVWLRRILADINQEHEEPTVIY 1192
Query: 3889 CDNKATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIELKYCPTNEQVADVFTKALSQA 4068
CDNKA IAMT+NPA+H RTKH+DIR HFIRDL EG + L+YC TNEQVADV TKALS+
Sbjct: 1193 CDNKAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRD 1252
Query: 4069 KHDYFRQELGVCKFRARGCIE 4131
KH YFR +LGVC F +RG +E
Sbjct: 1253 KHVYFRSKLGVCNFESRGSVE 1273
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 1279 bits (3309), Expect = 0.0
Identities = 643/1169 (55%), Positives = 810/1169 (69%), Gaps = 10/1169 (0%)
Frame = +1
Query: 655 ESKDLSAYTFDELMGSLLAHEDRLSRPHENVDEKVFQVKGDSSHKGKAEXXXXXXXXXXX 834
E+ D+S+Y+FD +M SLL HEDRL + E +EK FQ+KG+SS + +
Sbjct: 2 EANDMSSYSFDTMMSSLLGHEDRLGKKTEKTEEKAFQMKGESSGQKNSSVFEAAGRGRGR 61
Query: 835 XXXXXXXXXXXXXPAGDQRDF----------KSTIQCRHCNKPGHKDVDCWFKPKDEQKH 984
D KS IQC +C K GH +CW K K+E KH
Sbjct: 62 FGGHGNYGRGKGRGYYDNSSSSNQSYNRGTNKSDIQCHYCKKYGHMQTNCWKKQKEE-KH 120
Query: 985 AKFAEKSQEESYLFMVQSTKQGVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGN 1164
A F E+ E+ LFM +++ VWY+DSGCSNHM+G KS FK++DE K +V LGN
Sbjct: 121 ACFVEQENEQPRLFMAFESEEAS-KSVWYLDSGCSNHMTGTKSSFKELDESHKLKVKLGN 179
Query: 1165 DKLIKVEGRGTVAIKTSLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIK 1344
DK ++VEGRG VA+ G+ KL++ V Y P LAHNLLSVGQ++EN S+LFD C IK
Sbjct: 180 DKEVQVEGRGVVAVHNGHGNLKLIYGVYYIPDLAHNLLSVGQMVENNCSVLFDGNECVIK 239
Query: 1345 EKVSGTTLFDVPMMSNRMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXX 1524
EK SG TL V SN ++PL++SS E A+VA+ + + HLRYGH
Sbjct: 240 EKKSGVTLAMVKKTSNNLYPLEMSSVETK-ALVAKVSDISKLLHLRYGHLHENGLRVLNQ 298
Query: 1525 XNMVHGLPKIDNVDFCEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGS 1704
+MV GLPKI + CEGCVYGKQSR +FPVG++RRA+ LE++H+DLCGPM SLGGS
Sbjct: 299 KDMVIGLPKIGALKLCEGCVYGKQSRRSFPVGRARRATQYLEIVHADLCGPMQTASLGGS 358
Query: 1705 RYFMLFVDDYSRMSWVYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEF 1884
+YF++ DDYSRMSWVYFLKSK EAFD FK+FKALVEKQS +K LRTDRGGE+ S +F
Sbjct: 359 KYFLMLTDDYSRMSWVYFLKSKGEAFDMFKNFKALVEKQSEQQVKVLRTDRGGEFTSTKF 418
Query: 1885 NTFCEDNGIHRELTTPYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYI 2064
N FCE GIH ELTT YTP+QNGVAERKN T+VEM RSM+ R +P FWAE+V TAVY+
Sbjct: 419 NQFCEKEGIHHELTTAYTPEQNGVAERKNTTVVEMARSMLKERNLPNQFWAESVRTAVYL 478
Query: 2065 LNISPTKAVYNRTPFEAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYS 2244
LNISPTKAV NRTP+EAW G KP VSHLR+FG V Y+L+++ +RKKLDEKS+KC+F+GY
Sbjct: 479 LNISPTKAVLNRTPYEAWCGRKPGVSHLRVFGSVCYSLIDAHNRKKLDEKSEKCIFLGYC 538
Query: 2245 TQSKGYKLYDPVNGKSLISRDVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXX 2424
+QSKGY+LY+PV+GK + SR+V F+EE W + E ++ + D+ + P
Sbjct: 539 SQSKGYRLYNPVSGKIVESRNVTFDEEAVWTWR--EGDNGELVEIFVNDEQEENPSPANS 596
Query: 2425 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEAEPRYKSLHDIYASCSFALFVTEPACFKE 2604
+++SL +IY A F +P E
Sbjct: 597 ATNTPASSAPSSPGPNNGNGSSDGEGSSSISPPQKFRSLREIYEE-QHAFFSADPVTVNE 655
Query: 2605 ANEVAEWKEAMLDELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSVKRYKARLV 2784
A EW++AM +E+ +IE N TW+LV LPE K IG+KWVFK K+ AD ++++YKARLV
Sbjct: 656 AATKEEWRKAMEEEIASIEKNQTWQLVELPEEKHSIGVKWVFKTKYQADDNIQKYKARLV 715
Query: 2785 AKGYSQHQGIDYDETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGELQEEVYVS 2964
KGY+Q G+DY++TFSPVARF+T+R LL++ A +++P+YQFDVKSAFLNGEL+EEVYV
Sbjct: 716 VKGYAQEYGVDYEKTFSPVARFDTLRTLLALGAYMHWPIYQFDVKSAFLNGELREEVYVD 775
Query: 2965 QPEGFEVCGNEHKFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPTLYVKRAGK 3144
QPEGF V G E Y+L KALYGLKQAPRAWY ++DSYF + GF RS++EPTLY+K+ G
Sbjct: 776 QPEGFIVEGREGFVYRLYKALYGLKQAPRAWYNKIDSYFAETGFERSKSEPTLYIKKQGA 835
Query: 3145 NDFLVVVIYVDDMIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQETSGIFLS 3324
D LVV +YVDDMIYMGS+ SL+ +FK+SM +FEMTDLG L +FLGLEVKQ G+F+S
Sbjct: 836 GDILVVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTDLGLLYFFLGLEVKQVEDGVFVS 895
Query: 3325 QSKYAKDLLVKFNMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLNYLTHTRPD 3504
Q KYA DLL +F+M C AV TPM NEKL DGTE + + +RS++GGL YLTHTRPD
Sbjct: 896 QHKYACDLLKRFDMAGCNAVETPMNVNEKLLAGDGTEKADATKFRSLVGGLIYLTHTRPD 955
Query: 3505 IMYSVNVLSRFMHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYSDSDWGGCV 3684
I ++V+ +SRFMH PT+ H GAAKR+LRY+A T ++GLWY + + G++DSDW GCV
Sbjct: 956 ICFAVSAISRFMHGPTKQHFGAAKRLLRYIARTAEYGLWYCSVSKFKLVGFTDSDWAGCV 1015
Query: 3685 DNRKSTSGQVFYLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRRMLVDFHNE 3864
+RKSTSG VF LGS AV WSSKKQ+V ALSSSEAEY A +AACQA+WLRR+L D E
Sbjct: 1016 QDRKSTSGHVFNLGSGAVCWSSKKQNVTALSSSEAEYTAATAAACQAVWLRRILADIKQE 1075
Query: 3865 QYGPTTIFCDNKATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIELKYCPTNEQVADV 4044
Q TTIFCDNKATIAM +NPA+H RTKHI I+ HFIRDL SEG + L+YC TNEQ ADV
Sbjct: 1076 QEKATTIFCDNKATIAMNKNPAYHGRTKHISIKVHFIRDLVSEGSVTLEYCSTNEQSADV 1135
Query: 4045 FTKALSQAKHDYFRQELGVCKFRARGCIE 4131
TKALS+ K DYFR +LGVCKF + +E
Sbjct: 1136 LTKALSRNKFDYFRSKLGVCKFESMESVE 1164
>gb|OTG34809.1| putative zinc finger, CCHC-type [Helianthus annuus]
Length = 1458
Score = 1202 bits (3111), Expect = 0.0
Identities = 648/1375 (47%), Positives = 857/1375 (62%), Gaps = 53/1375 (3%)
Frame = +1
Query: 166 IPIFRGENYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQPNQQLRDNRKKDAKALFFIQ 345
IP+F+GE Y +W+++M T+ KS++LWDL+E+G + +Q +++ RK+DA A+ IQ
Sbjct: 15 IPVFKGEGYDYWNIRMKTILKSRDLWDLVESGIDSKETDQT--KIKSMRKRDAHAMALIQ 72
Query: 346 QAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQKNEKVQEY 525
QAV D +F RI LK E+ GD +V A+K+Q LRR+FE L M++ E V +Y
Sbjct: 73 QAVHDTLFSRIAAAETAKESWEILKLEFQGDTEVKAIKLQGLRRDFENLVMKEGEMVGDY 132
Query: 526 LSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTFDELMGSL 705
SRV IV+ +S+GE ++ + IV KVLRSL KFD VV +IE + DLS + +LMGSL
Sbjct: 133 FSRVMAIVSQKRSYGEEVTEQVIVEKVLRSLTSKFDFVVPSIEVAYDLSKLSPVKLMGSL 192
Query: 706 LAHEDR-LSRPHEN-----VDEKVFQVKGDSSHKGKAEXXXXXXXXXXXXXXXXXXXXXX 867
+ E R LSR EN +E QV D++
Sbjct: 193 QSQEQRMLSRSSENSNAEKTEEHALQVIQDNNRSQNTSGFRGRGRGTTRGRGR------- 245
Query: 868 XXPAGDQRDFKSTIQCRHCNKPGHKDVDCWFKPKDEQKHAKFAEKSQ--EESYLFM---- 1029
G D QC C K GH +CW+ + A+ EK + EE +LFM
Sbjct: 246 ----GRNMDRSRVPQCYVCKKYGHTSKECWYNQDTQVNVAETNEKEETSEEQHLFMACIE 301
Query: 1030 ------VQSTKQGVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGNDKLIKVEGR 1191
+ + Q N++W++DSGCSNHM+G +S F +DE K +V LGN K + +EG+
Sbjct: 302 DDKFCLMIKSDQVYNNNLWFIDSGCSNHMTGSRSSFIHLDETFKVDVQLGNKKKLAIEGK 361
Query: 1192 GTVAIKTSLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKE-------- 1347
GTV I ++L+ DV YAP L +NLLSVGQLM+ GYSLLF+ C IK
Sbjct: 362 GTVRINAGSNGSRLLDDVYYAPSLEYNLLSVGQLMKKGYSLLFERDECIIKNNGEFERDE 421
Query: 1348 ---KVSGTTLFDVPMMSNRMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXX 1518
K +G + + +++N MF LDVSS E ++ + WH R+ H
Sbjct: 422 CIIKNNGEVIMKIHILANNMFLLDVSSPE---VTTTGGDSSSQLWHKRFAHLNFDSMKLL 478
Query: 1519 XXXNMVHGLPKIDNVDFCEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLG 1698
NMV G+P+I CEGC+ GK +R F S RA LEL+H+DLCGPM V+SLG
Sbjct: 479 HDKNMVTGIPRIRRTTKCEGCLLGKHTRTPF-TSHSWRAKARLELVHADLCGPMQVQSLG 537
Query: 1699 GSRYFMLFVDDYSRMSWVYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSK 1878
S Y+ L +DD +RMSWVYFL KSEAFD FK FK LVEKQ IK LRTDRGGE+ SK
Sbjct: 538 HSLYYFLLIDDLTRMSWVYFLSKKSEAFDKFKVFKQLVEKQCQGFIKVLRTDRGGEFCSK 597
Query: 1879 EFNTFCEDNGIHRELTTPYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAV 2058
EFN+FCE+ GI RELTTP+TPQ NGV ERKNRTI+ M RSM+ + +P WAEAVATAV
Sbjct: 598 EFNSFCEEQGIRRELTTPHTPQLNGVVERKNRTIMGMVRSMLKDKEMPNFLWAEAVATAV 657
Query: 2059 YILNISPTKAVYNRTPFEAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVG 2238
YILN SPT AV +TP +AW G P+VS R+FG +AY V + RKKLD++SQK V +G
Sbjct: 658 YILNRSPTSAVEGKTPLQAWSGETPDVSKFRVFGSIAYKHVYAHGRKKLDDRSQKMVMIG 717
Query: 2239 YSTQS-KGYKLYDPVNGKSLISRDVVFNEEESWNFTSVEPNSSSKI------PYS----S 2385
YS QS GY+L DPV K +RD EE +WN+ + + P+S S
Sbjct: 718 YSAQSPSGYRLLDPVTRKVEATRDATIIEEAAWNWKEKSKSEKADFNVAFDDPFSVEVLS 777
Query: 2386 QDDVFDTPVVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEAEP--RYKSLHDIYAS 2559
Q + TP V + + L DIYA+
Sbjct: 778 QSEDGPTPYVESTPTNINMQQTSSYQMSPSSSVGTTIDASSSQSMQTPLNIRPLSDIYAT 837
Query: 2560 CS-----------FALFVTEPACFKEANEVAEWKEAMLDELKAIEHNHTWELVTLPEGKT 2706
FAL + +P CF +A W+ AM +E+ AIE N+TWELV LP GK
Sbjct: 838 TQPLEPEEYIHLQFALSICDPLCFDDAAHKKVWQVAMAEEIAAIEKNNTWELVPLPAGKN 897
Query: 2707 PIGLKWVFKIKHNADGSVKRYKARLVAKGYSQHQGIDYDETFSPVARFETVRILLSIAAM 2886
+G+KW+FK K A+G V R+KARLVAKGYSQ +G+D++ETF+PVARFET+R++L++AA
Sbjct: 898 IVGVKWLFKSKLGANGQVIRHKARLVAKGYSQKKGVDFEETFAPVARFETIRVVLAVAAQ 957
Query: 2887 LNYPVYQFDVKSAFLNGELQEEVYVSQPEGFEVCGNEHKFYKLKKALYGLKQAPRAWYKR 3066
+ V+Q DVKSAFLNGEL E++YV QPEG+++ +E K YKLKKALYGLKQAPRAWY +
Sbjct: 958 RGWLVHQLDVKSAFLNGELDEDIYVEQPEGYKLKNSEDKVYKLKKALYGLKQAPRAWYAK 1017
Query: 3067 VDSYFLKNGFLRSENEPTLYVKRAGKNDFLVVVIYVDDMIYMGSNESLIDDFKSSMQSEF 3246
+D YF KNG+ RS NEPTLYVK+ ND + V +YVDD+I S ESL+ +FK MQ F
Sbjct: 1018 IDGYFTKNGYNRSLNEPTLYVKQISNNDIIYVCLYVDDIICTSSCESLVSEFKQGMQEVF 1077
Query: 3247 EMTDLGKLQYFLGLEVKQETSGIFLSQSKYAKDLLVKFNMHNCKAVGTPMITNEKLQVED 3426
EMTD+G LQYFLGLEVKQ T GIF+SQ +YA++LL KF M K PM +K Q+ED
Sbjct: 1078 EMTDMGLLQYFLGLEVKQSTDGIFVSQGQYARNLLDKFQMKGSKFEALPMSPGDKPQLED 1137
Query: 3427 GTEAVNPSLYRSIIGGLNYLTHTRPDIMYSVNVLSRFMHKPTRLHLGAAKRVLRYVAGTV 3606
G VN +LYRS++GGL YLTHTRPD+ +SV VL+RFM P++ HL AAK+VLRY+ GTV
Sbjct: 1138 GEVKVNETLYRSLVGGLMYLTHTRPDLAFSVGVLARFMQSPSKQHLAAAKKVLRYIGGTV 1197
Query: 3607 DFGLWYSKTTNGTMYGYSDSDWGGCVDNRKSTSGQVFYLGSTAVSWSSKKQDVVALSSSE 3786
D GL Y + + + GY+DSDW GC D+ KS S VF LG+ AVSW SKKQ VALSS+E
Sbjct: 1198 DLGLKYERRNDLQLVGYTDSDWAGCKDDSKSVSANVFLLGNGAVSWCSKKQKTVALSSTE 1257
Query: 3787 AEYIAVASAACQAIWLRRMLVDFHNEQYGPTTIFCDNKATIAMTRNPAFHSRTKHIDIRF 3966
AEYI+ + ACQAIWL+R+L D Q T +FCD+K+ I +++NP +SR+KHI++R+
Sbjct: 1258 AEYISATTGACQAIWLKRILYDLGINQQKETILFCDSKSAINLSKNPVMNSRSKHIELRY 1317
Query: 3967 HFIRDLTSEGIIELKYCPTNEQVADVFTKALSQAKHDYFRQELGVCKFRARGCIE 4131
HFIRD+ ++G ++L++C TNEQ+AD+ TKA+ + K + R ++GV + +RG +E
Sbjct: 1318 HFIRDMVNQGQVKLEFCGTNEQLADLMTKAVPREKLVHLRFKIGVQECVSRGGVE 1372
>gb|AIC77183.1| polyprotein [Gossypium barbadense]
Length = 1369
Score = 1158 bits (2995), Expect = 0.0
Identities = 602/1367 (44%), Positives = 843/1367 (61%), Gaps = 55/1367 (4%)
Frame = +1
Query: 166 IPIFRGENYHFWSLKMMTMFKSQELWDLIENGF--------EDTHPEQPNQQLRDNRKKD 321
+P NY WS++M + SQ+ W+++E G+ E + LR+ RKKD
Sbjct: 9 VPQLTKTNYGNWSIRMKALLGSQDCWEIVEKGYIEPGDAATEAALSNDAKKALREARKKD 68
Query: 322 AKALFFIQQAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQ 501
KAL I Q +D+ F +I L++ + G +K V++Q+LR FE L M+
Sbjct: 69 QKALNSIFQGMDESTFEKISDVKNAKNAWEILQKSFQGVEKAKKVRLQSLRAEFEMLKMK 128
Query: 502 KNEKVQEYLSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYT 681
+E + +Y +RV +VN MK GE+L ++ K+LRSL KF++VV AIEESKDLS +
Sbjct: 129 SSENIDDYANRVKSVVNEMKRNGETLDEVRVMEKILRSLTRKFEYVVVAIEESKDLSKMS 188
Query: 682 FDELMGSLLAHEDR--LSRPHENVDEKVFQV----------------------------- 768
+EL+GSL AHE + L+ EN+++ +
Sbjct: 189 LEELVGSLQAHEQKMKLNEDSENLNQALHSKLSIDDGETSNNFSQGRGNRRGYRGGYRGG 248
Query: 769 -KGDSSHKGKAEXXXXXXXXXXXXXXXXXXXXXXXXPAGDQRDFKSTIQCRHCNKPGHKD 945
+G +G+ G ++ KS +QC +CNK GH
Sbjct: 249 NRGGRGSRGRGNQSYGRYQENKDYQTSNRGRGSRGRGRGRFQENKSQVQCYNCNKYGHFS 308
Query: 946 VDCWFKPK-DEQKHAKFAEKSQE--ESYLFMVQSTKQGVLNDVWYVDSGCSNHMSGIKSI 1116
+C K DE+ H A + E ES +F+ + VWY+D+G SNHM G K +
Sbjct: 309 YECRSTHKVDERNHVAVAAEGNEKVESSVFLTYGENEDRKRSVWYLDNGASNHMCGRKEL 368
Query: 1117 FKDIDELQKSEVALGNDKLIKVEGRGTVAIKTSLGHTKLVHDVQYAPLLAHNLLSVGQLM 1296
F ++DE ++ G++ +++G+G V I G K + DV Y P L NL+S+GQL+
Sbjct: 369 FTELDETVHGQITFGDNSHAEIKGKGKVVITQRNGEKKYISDVYYVPALKSNLISLGQLL 428
Query: 1297 ENGYSLLFDDGYCSIKEKVSGTTLFDVPMMSNRMFPLDVSSQEGNGAMVARENAEANKWH 1476
E GY + D +I+ K SG + V M NR+F LD+ S E +N E+ WH
Sbjct: 429 EKGYEVHMKDRSLAIRNK-SGELVVRVDMTRNRLFTLDIESGEVKCMKTDLKN-ESWLWH 486
Query: 1477 LRYGHXXXXXXXXXXXXNMVHGLPKIDNVD-FCEGCVYGKQSRAAFPVGKSRRASVCLEL 1653
LRYGH NMV+GLP I++ D CE CV GKQ R F VGKSRRA LE+
Sbjct: 487 LRYGHLGFSGLKLLSKTNMVNGLPSINHPDQLCEACVKGKQHRQKFEVGKSRRARRPLEI 546
Query: 1654 IHSDLCGPMSVESLGGSRYFMLFVDDYSRMSWVYFLKSKSEAFDNFKHFKALVEKQSGCH 1833
+H+D+ GP +ESLGG+RY++ F+DDYSR WVYFLK+KSEA + FK FKA+VEKQSG +
Sbjct: 547 VHTDISGPYDIESLGGNRYYLTFIDDYSRKCWVYFLKAKSEALEKFKEFKAMVEKQSGRY 606
Query: 1834 IKTLRTDRGGEYLSKEFNTFCEDNGIHRELTTPYTPQQNGVAERKNRTIVEMGRSMMNAR 2013
+K LR+DRGGEY +K + +FC+D+GI +LT TPQQNGVAERKNRTI++M RSM+ +
Sbjct: 607 LKILRSDRGGEYTAKLYESFCKDHGIIHQLTARRTPQQNGVAERKNRTILDMARSMIKGK 666
Query: 2014 GVPKHFWAEAVATAVYILNISPTKAVYNRTPFEAWRGTKPEVSHLRIFGCVAYALVNSSS 2193
+P+ FWAEAV AVY+LN PTK+V ++TP EAW G KP V HL+IFGC+AYA V
Sbjct: 667 HLPRTFWAEAVECAVYLLNQCPTKSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQ 726
Query: 2194 RKKLDEKSQKCVFVGYSTQSKGYKLYDPVNGKSLISRDVVFNEEESWNFTSVEPNSSSKI 2373
RKKLD++ +KC+F+GY +SK Y+LY+P+ K +ISRDV F+E + W ++ E
Sbjct: 727 RKKLDDRGEKCIFIGYDKRSKAYRLYNPLTKKLIISRDVEFDEADYWRWSEEEKKVEGL- 785
Query: 2374 PYSSQDDVFDTPVVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEAEPRYKSLHDIY 2553
+ ++DD DEA R +SL+DIY
Sbjct: 786 -FFNEDD----------NNQEEQGDDQSPGTTAPSSPTSSSGSSSLDEAPTRTRSLNDIY 834
Query: 2554 ASCS-------FALFVT----EPACFKEANEVAEWKEAMLDELKAIEHNHTWELVTLPEG 2700
S ++LF +P ++EA E +WK+AM +E+ AI N TWEL +LPEG
Sbjct: 835 NSTEPVETQFDYSLFCLMTECDPVTYEEAIENNKWKKAMDEEIAAIRRNDTWELTSLPEG 894
Query: 2701 KTPIGLKWVFKIKHNADGSVKRYKARLVAKGYSQHQGIDYDETFSPVARFETVRILLSIA 2880
+PIG+KWV+K K N +G V++YKARLVAKGY Q QG+DYDE F+PVAR +T+R+L+++A
Sbjct: 895 HSPIGVKWVYKTKTNKEGKVEKYKARLVAKGYKQRQGVDYDEIFAPVARIDTIRLLIAVA 954
Query: 2881 AMLNYPVYQFDVKSAFLNGELQEEVYVSQPEGFEVCGNEHKFYKLKKALYGLKQAPRAWY 3060
A + +YQ DVKSAFLNG L+EEVY+ QP G+ + G E K Y+LKK+LYGLKQAPRAW
Sbjct: 955 AQYKWKIYQMDVKSAFLNGYLEEEVYIEQPPGYSIQGKEDKVYRLKKSLYGLKQAPRAWN 1014
Query: 3061 KRVDSYFLKNGFLRSENEPTLYVKRAGKNDFLVVVIYVDDMIYMGSNESLIDDFKSSMQS 3240
R+D YF +NGF++S +E TLY K+ G D ++V +YVDDMI+ G+N + DDFK +M
Sbjct: 1015 TRIDEYFRRNGFIKSPHEHTLYTKKNGYGDIMIVCLYVDDMIFTGNNPGMSDDFKKAMTK 1074
Query: 3241 EFEMTDLGKLQYFLGLEVKQETSGIFLSQSKYAKDLLVKFNMHNCKAVGTPMITNEKLQV 3420
EFEMTD+G++ YFLG+EVKQ GIF+SQ KYA+ +L KF M +CK V TP KL V
Sbjct: 1075 EFEMTDIGEMSYFLGVEVKQMQDGIFVSQKKYAEQILNKFKMKDCKPVVTPADPGMKLSV 1134
Query: 3421 EDGTEAVNPSLYRSIIGGLNYLTHTRPDIMYSVNVLSRFMHKPTRLHLGAAKRVLRYVAG 3600
+ E++NP+L++S++G L YLT TRPDI Y+V ++SRFM KP + HL AAKR+LRY+ G
Sbjct: 1135 DSTRESINPTLFKSLVGSLRYLTITRPDITYAVGLVSRFMEKPKQDHLIAAKRILRYIKG 1194
Query: 3601 TVDFGLWYSKTTNGTMYGYSDSDWGGCVDNRKSTSGQVFYLGSTAVSWSSKKQDVVALSS 3780
T++ GL+Y+ + + + GYSDSD+GG +D+RKSTSG F++ S SWSSKKQ +ALS+
Sbjct: 1195 TMNHGLFYTHSQDSKLVGYSDSDYGGDLDDRKSTSGYAFHISSAVFSWSSKKQQTIALST 1254
Query: 3781 SEAEYIAVASAACQAIWLRRMLVDFHNEQYGPTTIFCDNKATIAMTRNPAFHSRTKHIDI 3960
EAEY+A A+ CQA+WL+ +L + GP TI+ DNK+ I++ +NP HSR+KHID
Sbjct: 1255 CEAEYMAAATCTCQAMWLKNILGEIGVSNEGPITIYVDNKSAISLAKNPVSHSRSKHIDT 1314
Query: 3961 RFHFIRDLTSEGIIELKYCPTNEQVADVFTKALSQAKHDYFRQELGV 4101
++HFIR+ +EL +C T +Q+AD+FTK L + F+++LG+
Sbjct: 1315 KYHFIREQVKNKNVELVHCRTEDQLADIFTKPLKVETFNKFKEKLGM 1361
>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1331
Score = 1148 bits (2970), Expect = 0.0
Identities = 610/1340 (45%), Positives = 831/1340 (62%), Gaps = 35/1340 (2%)
Frame = +1
Query: 187 NYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQ-------PNQQLRDNRKKDAKALFFIQ 345
NY WSL+M+ + + ++W+++E G T PE LRD+RK+D KAL I
Sbjct: 6 NYDNWSLRMVALLGAHDVWEVVEKGH--TEPENVESLSQAQKDSLRDSRKRDKKALCLIY 63
Query: 346 QAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQKNEKVQEY 525
Q +D+ F +I LK Y G +V V++QTLR FE L M++ E V +Y
Sbjct: 64 QGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRGEFEALHMKEGELVSDY 123
Query: 526 LSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTFDELMGSL 705
SRV + N++K GE L + I+ K+LRSL PKF+H+V EE+KDL A + ++L+GSL
Sbjct: 124 FSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAMSIEQLLGSL 183
Query: 706 LAHEDRLSRPHENVDEKVFQVKGDSSHKGKAEXXXXXXXXXXXXXXXXXXXXXXXXPAGD 885
A+E++ + E V E+VF+ DS + A P +
Sbjct: 184 QAYEEKKKKKEEIV-EQVFKAHVDSRKEENAHNQSRRSYSQEQGRGRAYGHGQGRRPNNN 242
Query: 886 Q-----------------RDFKSTIQCRHCNKPGHKDVDCWF--KPKDEQKHAKFAEKSQ 1008
R KS I+C +CNK GH +C K K E+K E+ Q
Sbjct: 243 NQRGESSNRGRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAEERCQ 302
Query: 1009 EESYLFMVQSTKQGVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGNDKLIKVEG 1188
E+ L + + ++ WY+DSG SNHM G +S+F ++DE K VA G++ + VEG
Sbjct: 303 EDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEG 362
Query: 1189 RGTVAIKTSLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKEKVSGTTL 1368
+G V I+ G + + ++ Y P + N+LS+GQL+E GY + + SI++ S +
Sbjct: 363 KGNVLIQLKNGEHQFISNIYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDNTS-RFI 421
Query: 1369 FDVPMMSNRMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXXNMVHGLP 1548
VPMM NRMF L++ S +G + ++ WHLR+GH MV GLP
Sbjct: 422 TKVPMMRNRMFVLNIQS-DGPQCLKMCYKDQSWLWHLRFGHLNFKGLDLLSKKAMVRGLP 480
Query: 1549 KIDNVD-FCEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGSRYFMLFV 1725
I + + CEGC+ GKQ R +FP RA LELIH+D+CGP+ SLG S YF+LF+
Sbjct: 481 CITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFI 540
Query: 1726 DDYSRMSWVYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEFNTFCEDN 1905
DD+SR +WVYFLK KSE F+NFK FKA VEK+SG IK LR+DRGGE+ SKEF +CEDN
Sbjct: 541 DDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDN 600
Query: 1906 GIHRELTTPYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYILNISPTK 2085
GI R+LT P +PQQNGVAERKNRTI+EM RSM+ ++ +PK FWAEAVA AVY+ N SPT+
Sbjct: 601 GIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTR 660
Query: 2086 AVYNRTPFEAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYSTQSKGYK 2265
+V +TP EAW G KP +SHLR+FG +A+ V R KLD+KS+K +F+GY SKGYK
Sbjct: 661 SVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYK 720
Query: 2266 LYDPVNGKSLISRDVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXXXXXXXXX 2445
LY+P + K++ISR+VVF+EE W++++ + +D F P V
Sbjct: 721 LYNPDSRKTIISRNVVFDEEGEWDWST-----------NCEDHTF-FPCVEEDDVEQQQQ 768
Query: 2446 XXXXXXXXXXXXXXXXXXXXXDDEAEPRYKSLHDIYASCS-------FALFV-TEPACFK 2601
E PR++SL +IY + F LF EP F+
Sbjct: 769 PQETPTTPPTSPNTTLQDYESSSERMPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQ 828
Query: 2602 EANEVAEWKEAMLDELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSVKRYKARL 2781
EA W+ AM +E++AI+ N TWELV+LP+ T IG+KWV+K K ++ G V+RYKARL
Sbjct: 829 EAIGKKSWRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEVQRYKARL 888
Query: 2782 VAKGYSQHQGIDYDETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGELQEEVYV 2961
VAKGYSQ GIDYDE F+PVAR ETVR+++S+AA N+ ++Q DVKSAFLNG L+EEVY+
Sbjct: 889 VAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGVLEEEVYI 948
Query: 2962 SQPEGFEVCGNEHKFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPTLYVKRAG 3141
QP+G+EV G E K +LKKALYGLKQAPRAW R+D YF + F++ E LY+K G
Sbjct: 949 EQPQGYEVKGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKEANFIKCPYEHALYIKAQG 1008
Query: 3142 KNDFLVVVIYVDDMIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQETSGIFL 3321
K D L+V +YVDD+I+ G+N S+ ++FK M EFEMTD+G + Y+LG+EVKQ GIF+
Sbjct: 1009 K-DILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEGIFI 1067
Query: 3322 SQSKYAKDLLVKFNMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLNYLTHTRP 3501
+Q YAKDLL KF + + VGTPM KL ++ E V+P+LY+S++G L YLT TRP
Sbjct: 1068 TQESYAKDLLKKFKLDDANPVGTPMECGIKLSKDEEGEKVDPTLYKSLVGSLRYLTCTRP 1127
Query: 3502 DIMYSVNVLSRFMHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYSDSDWGGC 3681
DI+Y+V V+SR+M PT HL AKR+LRY+ GT FGL+YS + + + GYSDSDW G
Sbjct: 1128 DILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGD 1187
Query: 3682 VDNRKSTSGQVFYLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRRMLVDFHN 3861
+D+RKSTSG VFY+G TA +W SKKQ +V LS+ EAEY+A S C AIWLR +L +
Sbjct: 1188 MDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSL 1247
Query: 3862 EQYGPTTIFCDNKATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIELKYCPTNEQVAD 4041
Q PT I+ DNK+TIA+ +NP FH R+KHI R+H+IR+ S ++++Y T++QVAD
Sbjct: 1248 PQVEPTKIYVDNKSTIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVAD 1307
Query: 4042 VFTKALSQAKHDYFRQELGV 4101
+FTK L + R LGV
Sbjct: 1308 IFTKPLKKEVFMKLRSLLGV 1327
>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1342
Score = 1148 bits (2969), Expect = 0.0
Identities = 610/1347 (45%), Positives = 832/1347 (61%), Gaps = 35/1347 (2%)
Frame = +1
Query: 166 IPIFRGENYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQ-------PNQQLRDNRKKDA 324
+P+ NY WSL+M+ + + ++W+++E G T PE LRD+RK+D
Sbjct: 10 VPMLTKSNYDNWSLRMVALLGAHDVWEVVEKGH--TEPENVESLSQAQKDSLRDSRKRDK 67
Query: 325 KALFFIQQAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQK 504
KAL I Q +D+ F +I LK Y G +V V++QTLR FE L M++
Sbjct: 68 KALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRGEFEALHMKE 127
Query: 505 NEKVQEYLSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTF 684
E V +Y SRV + N++K GE L + I+ K+LRSL PKF+H+V EE+KDL A +
Sbjct: 128 GELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAMSI 187
Query: 685 DELMGSLLAHEDRLSRPHENVDEKVFQVKGDSSHKGKAEXXXXXXXXXXXXXXXXXXXXX 864
++L+GSL A+E++ + E V E+VF+ DS + A
Sbjct: 188 EQLLGSLQAYEEKKKKKEEIV-EQVFKAHVDSRKEENAHNQSRRSYSQEQGRGRAYGHGQ 246
Query: 865 XXXPAGDQ-----------------RDFKSTIQCRHCNKPGHKDVDCWF--KPKDEQKHA 987
P + R KS I+C +CNK GH +C K K E+K
Sbjct: 247 GRRPNNNNQRGESSNRGRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKAN 306
Query: 988 KFAEKSQEESYLFMVQSTKQGVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGND 1167
E+ QE+ L + + ++ WY+DSG SNHM G +S+F ++DE K VA G++
Sbjct: 307 YAEERCQEDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDE 366
Query: 1168 KLIKVEGRGTVAIKTSLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKE 1347
+ VEG+G V I+ G + + +V Y P + N+LS+GQL+E GY + + SI++
Sbjct: 367 SKVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRD 426
Query: 1348 KVSGTTLFDVPMMSNRMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXX 1527
S + VPM NRMF L++ S +G + ++ WHLR+GH
Sbjct: 427 NTS-RFIAKVPMTRNRMFVLNIQS-DGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKK 484
Query: 1528 NMVHGLPKIDNVD-FCEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGS 1704
MV GLP I + + CEGC+ GKQ R +FP RA LELIH+D+CGP+ SLG S
Sbjct: 485 AMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKS 544
Query: 1705 RYFMLFVDDYSRMSWVYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEF 1884
YF+LF+DD+SR +WVYFLK KSE F+NFK FKA VEK+SG IK LR+DRGGE+ SKEF
Sbjct: 545 NYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEF 604
Query: 1885 NTFCEDNGIHRELTTPYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYI 2064
+CEDNGI R+LT P +PQQNGVAERKNRTI+EM RSM+ ++ +PK FWAEAVA AVY+
Sbjct: 605 QKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYL 664
Query: 2065 LNISPTKAVYNRTPFEAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYS 2244
N SPT++V +TP EAW G KP +SHLR+FG +A+ V R KLD+KS+K +F+GY
Sbjct: 665 TNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYD 724
Query: 2245 TQSKGYKLYDPVNGKSLISRDVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXX 2424
SKGYKLY+P + K++ISR+VVF+EE W++++ + +D F P V
Sbjct: 725 ANSKGYKLYNPDSRKTIISRNVVFDEEGEWDWST-----------NCEDHTF-FPCVEED 772
Query: 2425 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEAEPRYKSLHDIYASCS-------FALFV- 2580
E PR++SL +IY + F LF
Sbjct: 773 DVEQQQQPQETPTTPPTSPNTTLQDYESSSERMPRFRSLQEIYEATENLDNVTLFCLFAD 832
Query: 2581 TEPACFKEANEVAEWKEAMLDELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSV 2760
EP F+EA W+ AM +E++AI+ N TWELV+LP+ T IG+KWV+K K ++ G V
Sbjct: 833 CEPMNFQEAIGKKSWRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEV 892
Query: 2761 KRYKARLVAKGYSQHQGIDYDETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGE 2940
+RYKARLVAKGYSQ GIDYDE F+PVAR ETVR+++S+AA N+ ++Q DVKSAFLNG
Sbjct: 893 QRYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGV 952
Query: 2941 LQEEVYVSQPEGFEVCGNEHKFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPT 3120
L+EEVY+ QP+G+EV G E K +LKKALYGLKQAPRAW R+D YF + F++ E
Sbjct: 953 LEEEVYIEQPQGYEVKGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKEANFIKCPYEHA 1012
Query: 3121 LYVKRAGKNDFLVVVIYVDDMIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQ 3300
LY+K GK D L+V +YVDD+I+ G+N S+ ++FK M EFEMTD+G + Y+LG+EVKQ
Sbjct: 1013 LYIKAQGK-DILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQ 1071
Query: 3301 ETSGIFLSQSKYAKDLLVKFNMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLN 3480
GIF++Q YAKDLL KF + + VGTPM KL ++ E V+P+LY+S++G L
Sbjct: 1072 GNEGIFITQESYAKDLLKKFKLDDANPVGTPMECGIKLSKDEEGEKVDPTLYKSLVGSLR 1131
Query: 3481 YLTHTRPDIMYSVNVLSRFMHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYS 3660
YLT TRPDI+Y+V V+SR+M PT HL AKR+LRY+ GT FGL+YS + + + GYS
Sbjct: 1132 YLTCTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYS 1191
Query: 3661 DSDWGGCVDNRKSTSGQVFYLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRR 3840
DSDW G +D+RKSTSG VFY+G TA +W SKKQ +V LS+ EAEY+A S C AIWLR
Sbjct: 1192 DSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRN 1251
Query: 3841 MLVDFHNEQYGPTTIFCDNKATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIELKYCP 4020
+L + Q PT I+ DNK+ IA+ +NP FH R+KHI R+H+IR+ S ++++Y
Sbjct: 1252 LLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVK 1311
Query: 4021 TNEQVADVFTKALSQAKHDYFRQELGV 4101
T++QVAD+FTK L + R LGV
Sbjct: 1312 THDQVADIFTKPLKKEVFMKLRSLLGV 1338
>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1342
Score = 1147 bits (2968), Expect = 0.0
Identities = 610/1347 (45%), Positives = 832/1347 (61%), Gaps = 35/1347 (2%)
Frame = +1
Query: 166 IPIFRGENYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQ-------PNQQLRDNRKKDA 324
+P+ NY WSL+M+ + + ++W+++E G T PE LRD+RK+D
Sbjct: 10 VPMLTKSNYDNWSLRMVALLGAHDVWEVVEKGH--TEPENVESLSQAQKDSLRDSRKRDK 67
Query: 325 KALFFIQQAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQK 504
KAL I Q +D+ F +I LK Y G +V V++QTLR FE L M++
Sbjct: 68 KALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRGEFEALHMKE 127
Query: 505 NEKVQEYLSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTF 684
E V +Y SRV + N++K GE L + I+ K+LRSL PKF+H+V EE+KDL A +
Sbjct: 128 GELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAMSI 187
Query: 685 DELMGSLLAHEDRLSRPHENVDEKVFQVKGDSSHKGKAEXXXXXXXXXXXXXXXXXXXXX 864
++L+GSL A+E++ + E V E+VF+ DS + A
Sbjct: 188 EQLLGSLQAYEEKKKKKEEIV-EQVFKAHVDSRKEENAHNQSRRSYSQEQGRGRAYGHGQ 246
Query: 865 XXXPAGDQ-----------------RDFKSTIQCRHCNKPGHKDVDCWF--KPKDEQKHA 987
P + R KS I+C +CNK GH +C K K E+K
Sbjct: 247 GRRPNNNNQRGESSNRGRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKAN 306
Query: 988 KFAEKSQEESYLFMVQSTKQGVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGND 1167
E+ QE+ L + + ++ WY+DSG SNHM G +S+F ++DE K VA G++
Sbjct: 307 YAEERCQEDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDE 366
Query: 1168 KLIKVEGRGTVAIKTSLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKE 1347
+ VEG+G V I+ G + + +V Y P + N+LS+GQL+E GY + + SI++
Sbjct: 367 SKVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRD 426
Query: 1348 KVSGTTLFDVPMMSNRMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXX 1527
S + VPM NRMF L++ S +G + ++ WHLR+GH
Sbjct: 427 NTS-RFIAKVPMTRNRMFVLNIQS-DGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKK 484
Query: 1528 NMVHGLPKIDNVD-FCEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGS 1704
MV GLP I + + CEGC+ GKQ R +FP RA LELIH+D+CGP+ SLG S
Sbjct: 485 AMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKS 544
Query: 1705 RYFMLFVDDYSRMSWVYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEF 1884
YF+LF+DD+SR +WVYFLK KSE F+NFK FKA VEK+SG IK LR+DRGGE+ SKEF
Sbjct: 545 NYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEF 604
Query: 1885 NTFCEDNGIHRELTTPYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYI 2064
+CEDNGI R+LT P +PQQNGVAERKNRTI+EM RSM+ ++ +PK FWAEAVA AVY+
Sbjct: 605 QKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYL 664
Query: 2065 LNISPTKAVYNRTPFEAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYS 2244
N SPT++V +TP EAW G KP +SHLR+FG +A+ V R KLD+KS+K +F+GY
Sbjct: 665 TNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYD 724
Query: 2245 TQSKGYKLYDPVNGKSLISRDVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXX 2424
SKGYKLY+P + K++ISR+VVF+EE W++++ + +D F P V
Sbjct: 725 ANSKGYKLYNPDSRKTIISRNVVFDEEGEWDWST-----------NCEDHTF-FPCVEED 772
Query: 2425 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEAEPRYKSLHDIYASCS-------FALFV- 2580
E PR++SL +IY + F LF
Sbjct: 773 DVEQQQQPQETPTTPPTSPNTTLQDYESSSERMPRFRSLQEIYEATENLDNVTLFCLFAD 832
Query: 2581 TEPACFKEANEVAEWKEAMLDELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSV 2760
EP F+EA W+ AM +E++AI+ N TWELV+LP+ T IG+KWV+K K ++ G V
Sbjct: 833 CEPMNFQEAIGKKSWRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEV 892
Query: 2761 KRYKARLVAKGYSQHQGIDYDETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGE 2940
+RYKARLVAKGYSQ GIDYDE F+PVAR ETVR+++S+AA N+ ++Q DVKSAFLNG
Sbjct: 893 QRYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGV 952
Query: 2941 LQEEVYVSQPEGFEVCGNEHKFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPT 3120
L+EEVY+ QP+G+EV G E K +LKKALYGLKQAPRAW R+D YF + F++ E
Sbjct: 953 LEEEVYIEQPQGYEVKGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKEVNFIKCPYEHA 1012
Query: 3121 LYVKRAGKNDFLVVVIYVDDMIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQ 3300
LY+K GK D L+V +YVDD+I+ G+N S+ ++FK M EFEMTD+G + Y+LG+EVKQ
Sbjct: 1013 LYIKAQGK-DILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQ 1071
Query: 3301 ETSGIFLSQSKYAKDLLVKFNMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLN 3480
GIF++Q YAKDLL KF + + VGTPM KL ++ E V+P+LY+S++G L
Sbjct: 1072 GNEGIFITQESYAKDLLKKFKLDDANPVGTPMECGIKLSKDEEGEKVDPTLYKSLVGSLR 1131
Query: 3481 YLTHTRPDIMYSVNVLSRFMHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYS 3660
YLT TRPDI+Y+V V+SR+M PT HL AKR+LRY+ GT FGL+YS + + + GYS
Sbjct: 1132 YLTCTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYS 1191
Query: 3661 DSDWGGCVDNRKSTSGQVFYLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRR 3840
DSDW G +D+RKSTSG VFY+G TA +W SKKQ +V LS+ EAEY+A S C AIWLR
Sbjct: 1192 DSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRN 1251
Query: 3841 MLVDFHNEQYGPTTIFCDNKATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIELKYCP 4020
+L + Q PT I+ DNK+ IA+ +NP FH R+KHI R+H+IR+ S ++++Y
Sbjct: 1252 LLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVK 1311
Query: 4021 TNEQVADVFTKALSQAKHDYFRQELGV 4101
T++QVAD+FTK L + R LGV
Sbjct: 1312 THDQVADIFTKPLKKEVFMKLRSLLGV 1338
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 1145 bits (2963), Expect = 0.0
Identities = 608/1356 (44%), Positives = 841/1356 (62%), Gaps = 34/1356 (2%)
Frame = +1
Query: 166 IPIFRGENYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQPNQQ-----LRDNRKKDAKA 330
+P+ NY WSL+M + + ++W+++E GF + E Q LRD+RK+D KA
Sbjct: 10 VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69
Query: 331 LFFIQQAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQKNE 510
L I Q +D+ F ++ L+ Y G +V V++QTLR FE L M++ E
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129
Query: 511 KVQEYLSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTFDE 690
V +Y SRV + N++K GE L + I+ KVLRSL KF+H+V IEE+KDL A T ++
Sbjct: 130 LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQ 189
Query: 691 LMGSLLAHEDRLSRPHENVDEKV------------FQVKGDSSHKGKAEXXXXXXXXXXX 834
L+GSL A+E++ + + +++ + +Q +G +G+
Sbjct: 190 LLGSLQAYEEKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249
Query: 835 XXXXXXXXXXXXXPAGDQ-----RDFKSTIQCRHCNKPGHKDVDCWF--KPKDEQKHAKF 993
+ R KS+++C +C K GH +C K E+K
Sbjct: 250 HEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYV 309
Query: 994 AEKSQEESYLFMVQSTK-QGVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGNDK 1170
EK QEE L M K + N WY+DSG SNHM G KS+F ++DE + VALG++
Sbjct: 310 EEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDES 369
Query: 1171 LIKVEGRGTVAIKTSLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKEK 1350
++V+G+G + I+ G + + +V Y P + N+LS+GQL+E GY + D SI+++
Sbjct: 370 KMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQ 429
Query: 1351 VSGTTLFDVPMMSNRMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXXN 1530
S + VPM NRMF L++ + + + E+ WHLR+GH
Sbjct: 430 ESNL-ITKVPMSKNRMFVLNIRNDIAQCLKMCYKE-ESWLWHLRFGHLNFGGLELLSRKE 487
Query: 1531 MVHGLPKIDNVD-FCEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGSR 1707
MV GLP I++ + CEGC+ GKQ + +FP S RA LELIH+D+CGP+ +SLG S
Sbjct: 488 MVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSN 547
Query: 1708 YFMLFVDDYSRMSWVYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEFN 1887
YF+LF+DD+SR +WVYFLK KSE F+ FK FKA VEK+SG IKT+R+DRGGE+ SKEF
Sbjct: 548 YFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFL 607
Query: 1888 TFCEDNGIHRELTTPYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYIL 2067
+CEDNGI R+LT P +PQQNGVAERKNRTI+EM RSM+ ++ +PK WAEAVA AVY+L
Sbjct: 608 KYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLL 667
Query: 2068 NISPTKAVYNRTPFEAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYST 2247
N SPTK+V +TP EAW G K VSHLR+FG +A+A V R KLD+KS+K +F+GY
Sbjct: 668 NRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDN 727
Query: 2248 QSKGYKLYDPVNGKSLISRDVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXXX 2427
SKGYKLY+P K++ISR++VF+EE W++ S E + + P+ +D+ T
Sbjct: 728 NSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNF-FPHFEEDEPEPT------- 779
Query: 2428 XXXXXXXXXXXXXXXXXXXXXXXXXXXDDEAEPRYKSLHDIYASCS-------FALFVT- 2583
E PR++S+ ++Y F LF
Sbjct: 780 ---REEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAEC 836
Query: 2584 EPACFKEANEVAEWKEAMLDELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSVK 2763
EP F+EA E W+ AM +E+K+I+ N TWEL +LP G IG+KWV+K K N+ G V+
Sbjct: 837 EPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVE 896
Query: 2764 RYKARLVAKGYSQHQGIDYDETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGEL 2943
RYKARLVAKGY Q GIDYDE F+PVAR ETVR+++S+AA + ++Q DVKSAFLNG+L
Sbjct: 897 RYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 956
Query: 2944 QEEVYVSQPEGFEVCGNEHKFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPTL 3123
+EEVY+ QP+G+ V G E K +LKKALYGLKQAPRAW R+D YF + F++ E L
Sbjct: 957 EEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL 1016
Query: 3124 YVKRAGKNDFLVVVIYVDDMIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQE 3303
Y+K K D L+ +YVDD+I+ G+N S+ ++FK M EFEMTD+G + Y+LG+EVKQE
Sbjct: 1017 YIK-IQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQE 1075
Query: 3304 TSGIFLSQSKYAKDLLVKFNMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLNY 3483
+GIF++Q YAK++L KF M + V TPM KL ++ E V+P+ ++S++G L Y
Sbjct: 1076 DNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRY 1135
Query: 3484 LTHTRPDIMYSVNVLSRFMHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYSD 3663
LT TRPDI+Y+V V+SR+M PT H AAKR+LRY+ GTV+FGL YS T++ + GYSD
Sbjct: 1136 LTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSD 1195
Query: 3664 SDWGGCVDNRKSTSGQVFYLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRRM 3843
SDWGG VD+RKSTSG VFY+G TA +W SKKQ +V LS+ EAEY+A S C AIWLR +
Sbjct: 1196 SDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNL 1255
Query: 3844 LVDFHNEQYGPTTIFCDNKATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIELKYCPT 4023
L + Q PT IF DNK+ IA+ +NP FH R+KHID R+H+IR+ S+ ++L+Y T
Sbjct: 1256 LKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKT 1315
Query: 4024 NEQVADVFTKALSQAKHDYFRQELGVCKFRARGCIE 4131
++QVAD+FTK L + R LGV K RG +E
Sbjct: 1316 HDQVADIFTKPLKREDFIKMRSLLGVAKSSLRGGVE 1351
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 1144 bits (2960), Expect = 0.0
Identities = 608/1356 (44%), Positives = 840/1356 (61%), Gaps = 34/1356 (2%)
Frame = +1
Query: 166 IPIFRGENYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQPNQQ-----LRDNRKKDAKA 330
+P+ NY WSL+M + + ++W+++E GF + E Q LRD+RK+D KA
Sbjct: 10 VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69
Query: 331 LFFIQQAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQKNE 510
L I Q +D+ F ++ L+ Y G +V V++QTLR FE L M++ E
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129
Query: 511 KVQEYLSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTFDE 690
V +Y SRV + N++K GE L + I+ KVLRSL KF+H+V IEE+KDL A T ++
Sbjct: 130 LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQ 189
Query: 691 LMGSLLAHEDRLSRPHENVDEKV------------FQVKGDSSHKGKAEXXXXXXXXXXX 834
L+GSL A+E++ + + V++ + +Q +G +G+
Sbjct: 190 LLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249
Query: 835 XXXXXXXXXXXXXPAGDQ-----RDFKSTIQCRHCNKPGHKDVDCWF--KPKDEQKHAKF 993
+ R KS+++C +C K GH +C K E+K
Sbjct: 250 HEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYV 309
Query: 994 AEKSQEESYLFMVQSTK-QGVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGNDK 1170
EK QEE L M K + N WY+DSG SNHM G KS+F ++DE + VALG++
Sbjct: 310 EEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDES 369
Query: 1171 LIKVEGRGTVAIKTSLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKEK 1350
++V+G+G + I+ G + + +V Y P + N+LS+GQL+E GY + D SI+++
Sbjct: 370 KMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQ 429
Query: 1351 VSGTTLFDVPMMSNRMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXXN 1530
S + VPM NRMF L++ + + + E+ WHLR+GH
Sbjct: 430 ESNL-ITKVPMSKNRMFVLNIRNDIAQCLKMCYKE-ESWLWHLRFGHLNFGGLELLSRKE 487
Query: 1531 MVHGLPKIDNVD-FCEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGSR 1707
MV GLP I++ + CEGC+ GKQ + +FP S RA LELIH+D+CGP+ +SLG S
Sbjct: 488 MVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSN 547
Query: 1708 YFMLFVDDYSRMSWVYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEFN 1887
YF+LF+DD+SR +WVYFLK KSE F+ FK FKA VEK+SG IKT+R+DRGGE+ SKEF
Sbjct: 548 YFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFL 607
Query: 1888 TFCEDNGIHRELTTPYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYIL 2067
+CEDNGI R+LT P +PQQNGV ERKNRTI+EM RSM+ ++ +PK WAEAVA AVY+L
Sbjct: 608 KYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLL 667
Query: 2068 NISPTKAVYNRTPFEAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYST 2247
N SPTK+V +TP EAW G KP VSHLR+FG +A+A V R KLD+KS+K +F+GY
Sbjct: 668 NRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDN 727
Query: 2248 QSKGYKLYDPVNGKSLISRDVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXXX 2427
SKGYKLY+P K++ISR++VF+EE W++ S E + + P+ +D+ T
Sbjct: 728 NSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNF-FPHFEEDEPEPT------- 779
Query: 2428 XXXXXXXXXXXXXXXXXXXXXXXXXXXDDEAEPRYKSLHDIYASCS-------FALFVT- 2583
E PR++S+ ++Y F LF
Sbjct: 780 ---REEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAEC 836
Query: 2584 EPACFKEANEVAEWKEAMLDELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSVK 2763
EP F++A E W+ AM +E+K+I+ N TWEL +LP G IG+KWV+K K N+ G V+
Sbjct: 837 EPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVE 896
Query: 2764 RYKARLVAKGYSQHQGIDYDETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGEL 2943
RYKARLVAKGYSQ GIDYDE F+PVAR ETVR+++S+AA + ++Q DVKSAFLNG+L
Sbjct: 897 RYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 956
Query: 2944 QEEVYVSQPEGFEVCGNEHKFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPTL 3123
+EEVY+ QP+G+ V G E K +LKK LYGLKQAPRAW R+D YF + F++ E L
Sbjct: 957 EEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL 1016
Query: 3124 YVKRAGKNDFLVVVIYVDDMIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQE 3303
Y+K K D L+ +YVDD+I+ G+N S+ ++FK M EFEMTD+G + Y+LG+EVKQE
Sbjct: 1017 YIK-IQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQE 1075
Query: 3304 TSGIFLSQSKYAKDLLVKFNMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLNY 3483
+GIF++Q YAK++L KF M + V TPM KL ++ E V+P+ ++S++G L Y
Sbjct: 1076 DNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRY 1135
Query: 3484 LTHTRPDIMYSVNVLSRFMHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYSD 3663
LT TRPDI+Y+V V+SR+M PT H AAKR+LRY+ GTV+FGL YS T++ + GYSD
Sbjct: 1136 LTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSD 1195
Query: 3664 SDWGGCVDNRKSTSGQVFYLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRRM 3843
SDWGG VD+RKSTSG VFY+G TA +W SKKQ +V LS+ EAEY+A S C AIWLR +
Sbjct: 1196 SDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNL 1255
Query: 3844 LVDFHNEQYGPTTIFCDNKATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIELKYCPT 4023
L + Q PT IF DNK+ IA+ +NP FH R+KHID R+H+IR+ S+ ++L+Y T
Sbjct: 1256 LKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKT 1315
Query: 4024 NEQVADVFTKALSQAKHDYFRQELGVCKFRARGCIE 4131
++QVAD FTK L + R LGV K RG +E
Sbjct: 1316 HDQVADFFTKPLKRENFIKMRSLLGVAKSSLRGGVE 1351
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 1142 bits (2955), Expect = 0.0
Identities = 609/1357 (44%), Positives = 841/1357 (61%), Gaps = 35/1357 (2%)
Frame = +1
Query: 166 IPIFRGENYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQPNQQ-----LRDNRKKDAKA 330
+P+ NY WSL+M + + ++W+++E GF + E Q LRD+RK+D KA
Sbjct: 10 VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69
Query: 331 LFFIQQAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQKNE 510
L I Q +D+ F ++ L+ Y G +V V++QTLR FE L M++ E
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGE 129
Query: 511 KVQEYLSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTFDE 690
V +Y SRV + N++K GE L + I+ KVLRSL KF+H+V IEE+KDL A T ++
Sbjct: 130 LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQ 189
Query: 691 LMGSLLAHEDRLSRPHENVDEKV-------------FQVKGDSSHKGKAEXXXXXXXXXX 831
L+GSL A+E++ + E++ E+V +Q +G +G+
Sbjct: 190 LLGSLQAYEEK-KKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248
Query: 832 XXXXXXXXXXXXXXPAGDQ-----RDFKSTIQCRHCNKPGHKDVDCWF--KPKDEQKHAK 990
+ R KS+++C +C K GH +C K E+K
Sbjct: 249 PHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKAHY 308
Query: 991 FAEKSQEESYLFMVQSTK-QGVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGND 1167
EK QEE L M K + N WY+DSG SNHM G KS+F ++DE + VALG++
Sbjct: 309 VEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 368
Query: 1168 KLIKVEGRGTVAIKTSLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKE 1347
++V+G+G + I+ G + + +V Y P + N+LS+GQL+E GY + D SI++
Sbjct: 369 SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 428
Query: 1348 KVSGTTLFDVPMMSNRMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXX 1527
+ S + VPM NRMF L++ + + + E+ WHLR+GH
Sbjct: 429 QESNL-ITKVPMSKNRMFVLNIRNDIAQCLKMCYKE-ESWLWHLRFGHLNFGGLELLSRK 486
Query: 1528 NMVHGLPKIDNVD-FCEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGS 1704
MV GLP I++ + CEGC+ GKQ + +FP S RA LELIH+D+CGP+ +SLG S
Sbjct: 487 EMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKS 546
Query: 1705 RYFMLFVDDYSRMSWVYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEF 1884
YF+LF+DD+SR +WVYFLK KSE F+ FK FKA VEK+SG IKT+R+DRGGE+ SKEF
Sbjct: 547 NYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEF 606
Query: 1885 NTFCEDNGIHRELTTPYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYI 2064
+CEDNGI R+LT P +PQQNGV ERKNRTI+EM RSM+ ++ +PK WAEAVA AVY+
Sbjct: 607 LKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYL 666
Query: 2065 LNISPTKAVYNRTPFEAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYS 2244
LN SPTK+V +TP EAW G KP VSHLR+FG +A+A V R KLD+KS+K +F+GY
Sbjct: 667 LNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYD 726
Query: 2245 TQSKGYKLYDPVNGKSLISRDVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXX 2424
SKGYKLY+P K++ISR++VF+EE W++ S E + + P+ +D+ T
Sbjct: 727 NNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNF-FPHFEEDEPEPT------ 779
Query: 2425 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEAEPRYKSLHDIYASCS-------FALFVT 2583
E PR++S+ ++Y F LF
Sbjct: 780 ----REEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAE 835
Query: 2584 -EPACFKEANEVAEWKEAMLDELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSV 2760
EP F++A E W+ AM +E+K+I+ N TWEL +LP G IG+KWV+K K N+ G V
Sbjct: 836 CEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEV 895
Query: 2761 KRYKARLVAKGYSQHQGIDYDETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGE 2940
+RYKARLVAKGYSQ GIDYDE F+PVAR ETVR+++S+AA + ++Q DVKSAFLNG+
Sbjct: 896 ERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGD 955
Query: 2941 LQEEVYVSQPEGFEVCGNEHKFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPT 3120
L+EEVY+ QP+G+ V G E K +LKK LYGLKQAPRAW R+D YF + F++ E
Sbjct: 956 LEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHA 1015
Query: 3121 LYVKRAGKNDFLVVVIYVDDMIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQ 3300
LY+K K D L+ +YVDD+I+ G+N S+ ++FK M EFEMTD+G + Y+LG+EVKQ
Sbjct: 1016 LYIK-IQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 1074
Query: 3301 ETSGIFLSQSKYAKDLLVKFNMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLN 3480
E +GIF++Q YAK++L KF + + V TPM KL ++ E V+P+ ++S++G L
Sbjct: 1075 EDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLR 1134
Query: 3481 YLTHTRPDIMYSVNVLSRFMHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYS 3660
YLT TRPDI+Y+V V+SR+M PT H AAKR+LRY+ GTV+FGL YS T++ + GYS
Sbjct: 1135 YLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYS 1194
Query: 3661 DSDWGGCVDNRKSTSGQVFYLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRR 3840
DSDWGG VD+RKSTSG VFY+G TA +W SKKQ +V LS+ EAEY+A S C AIWLR
Sbjct: 1195 DSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRN 1254
Query: 3841 MLVDFHNEQYGPTTIFCDNKATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIELKYCP 4020
+L + Q PT IF DNK+ IA+ +NP FH R+KHID R+H+IR+ S+ ++L+Y
Sbjct: 1255 LLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVK 1314
Query: 4021 TNEQVADVFTKALSQAKHDYFRQELGVCKFRARGCIE 4131
T++QVAD FTK L + R LGV K RG +E
Sbjct: 1315 THDQVADFFTKPLKRENFIKMRSLLGVAKSSLRGGVE 1351
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 1077 bits (2785), Expect = 0.0
Identities = 585/1337 (43%), Positives = 810/1337 (60%), Gaps = 15/1337 (1%)
Frame = +1
Query: 166 IPIFRGENYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQPNQQ-----LRDNRKKDAKA 330
+P+ NY WSL+M + + ++W+++E GF + E Q LRD+RK+D KA
Sbjct: 10 VPVLTKSNYDNWSLQMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69
Query: 331 LFFIQQAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQKNE 510
L I Q +D+ F ++ L+ Y G +V V++QTLR FE L M++ E
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGVDQVKKVRLQTLRGEFEALQMKEGE 129
Query: 511 KVQEYLSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTFDE 690
V +Y SRV + N++K GE L + I+ KVLRSL KF+H+V IEE+KDL A T ++
Sbjct: 130 LVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQ 189
Query: 691 LMGSLLAHEDRLSRPHENVDEKVFQVKGDSSHKGKAEXXXXXXXXXXXXXXXXXXXXXXX 870
L+GSL A+E++ + E++ E+V ++ G++
Sbjct: 190 LLGSLQAYEEK-KKKKEDIVEQVLNMRITKEENGQSYQRRGGGEVRGRGRGGY------- 241
Query: 871 XPAGDQRDFKSTIQCRHCNKPGHKDVDCWFKPKDEQKHAKFAEKSQEESYLFMVQSTK-Q 1047
G+ R ++ + P +K K E+K EK QEE L M K +
Sbjct: 242 ---GNGRGWRPHEDNTNQRAPSNK--------KFEEKANYVEEKIQEEDMLLMASYKKDE 290
Query: 1048 GVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGNDKLIKVEGRGTVAIKTSLGHT 1227
N WY+DSG SNHM G KS+F ++DE + VALG++ ++V+G+G + I+ G
Sbjct: 291 QEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDH 350
Query: 1228 KLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKEKVSGTTLFDVPMMSNRMFPL 1407
+ + +V Y P + N+LS+GQL+E GY + D SI+++ S + VPM NRMF L
Sbjct: 351 QFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNL-ITKVPMSKNRMFVL 409
Query: 1408 DVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXXNMVHGLPKIDNVD-FCEGCV 1584
++ + + + E+ WHLR+GH MV GLP I++ + CEGC+
Sbjct: 410 NIRNDIAQCLKMCYKE-ESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCL 468
Query: 1585 YGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGSRYFMLFVDDYSRMSWVYFLK 1764
GKQ + +FP S RA LELIH+D+CGP+ +SL
Sbjct: 469 LGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSL----------------------- 505
Query: 1765 SKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEFNTFCEDNGIHRELTTPYTPQ 1944
KSE F FK FKA VEK+SG IKT+R+DRGGE+ SKEF +CEDNGI R+LT P +PQ
Sbjct: 506 EKSEVFKIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQ 565
Query: 1945 QNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYILNISPTKAVYNRTPFEAWRG 2124
QNGVAERKNRTI+EM RSM+ ++ +PK WAEAVA AVY+LN SPTK+V +TP EAW G
Sbjct: 566 QNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSG 625
Query: 2125 TKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYSTQSKGYKLYDPVNGKSLISR 2304
KP VSHLR+FG +A+A V R KLD+KS+K +F+GY SKGYKLY+P K++ISR
Sbjct: 626 RKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISR 685
Query: 2305 DVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXXXXXXXXXXXXXXXXXXXXXX 2484
++VF+EE W++ S E + + P+ +D+ T
Sbjct: 686 NIVFDEEGEWDWNSNEEDYNF-FPHFEEDEPEPT----------REEPPSEEPTTRPTSL 734
Query: 2485 XXXXXXXXDDEAEPRYKSLHDIYASCS-------FALFVT-EPACFKEANEVAEWKEAML 2640
E PR++S+ ++Y F LF EP F+EA E W+ AM
Sbjct: 735 TSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMD 794
Query: 2641 DELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSVKRYKARLVAKGYSQHQGIDY 2820
+E+K+I+ N TWEL +LP G IG+KWV+K K N+ G V+RYKARLVAKGYSQ GIDY
Sbjct: 795 EEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDY 854
Query: 2821 DETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGELQEEVYVSQPEGFEVCGNEH 3000
DE F+PVAR ETVR+++S+AA + ++Q D K AFLNG+ +EEVY+ QP+G+ V G E
Sbjct: 855 DEVFAPVARLETVRLIISLAAQNKWKIHQMDFKLAFLNGDFEEEVYIEQPQGYIVKGEED 914
Query: 3001 KFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPTLYVKRAGKNDFLVVVIYVDD 3180
K +LKKALYGLKQAPRAW R+D YF + F++ E LY+K K D L+ +YVDD
Sbjct: 915 KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIK-IQKEDILIACLYVDD 973
Query: 3181 MIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQETSGIFLSQSKYAKDLLVKF 3360
+I+ G+N S+ ++FK M EFEMTD+G + Y+LG+EVKQE + IF++Q YAK++L KF
Sbjct: 974 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGYAKEVLKKF 1033
Query: 3361 NMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLNYLTHTRPDIMYSVNVLSRFM 3540
M + V TPM KL ++ E V+P+ ++S++G L YLT TRPDI+Y+V V+SR+M
Sbjct: 1034 KMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYM 1093
Query: 3541 HKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYSDSDWGGCVDNRKSTSGQVFY 3720
PT H AAKR+LRY+ GTV+FGL YS T++ + GYSDSDWG VD+RKSTSG VFY
Sbjct: 1094 EHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGRDVDDRKSTSGFVFY 1153
Query: 3721 LGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRRMLVDFHNEQYGPTTIFCDNK 3900
+G TA +W SKKQ +V LS+ EAEY+A S C AIWLR +L + Q PT IF DNK
Sbjct: 1154 IGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNK 1213
Query: 3901 ATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIELKYCPTNEQVADVFTKALSQAKHDY 4080
+ IA+ +NP FH R+KHID R+H+IR+ S+ ++L+Y T++QVAD+FTK L +
Sbjct: 1214 SAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIK 1273
Query: 4081 FRQELGVCKFRARGCIE 4131
R LGV K RG +E
Sbjct: 1274 MRSLLGVAKSSLRGGVE 1290
>gb|KYP39674.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1321
Score = 1031 bits (2665), Expect = 0.0
Identities = 557/1335 (41%), Positives = 788/1335 (59%), Gaps = 24/1335 (1%)
Frame = +1
Query: 187 NYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQPNQ-----QLRDNRKKDAKALFFIQQA 351
NY WSL+M + +SQ LW++++ G+E+ E+ L + KD+ AL+F+ A
Sbjct: 11 NYENWSLQMKALLRSQRLWEVVQKGYEEPEEEEELTVTQLATLEKMQAKDSSALYFLYNA 70
Query: 352 VDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQKNEKVQEYLS 531
VD+L F +I L+ + G +V +++QTLR FE L M+ E + E++S
Sbjct: 71 VDELDFEKIGSAANSKEAWETLEVAHRGSSRVRQIRLQTLRGEFENLKMEDREPITEFVS 130
Query: 532 RVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTFDELMGSLLA 711
RV + N + GE + IV K+LRSL FD+VV AIEESKDL+ T +EL GSL A
Sbjct: 131 RVQKVTNQLMRSGEPVPENRIVEKILRSLNKDFDYVVCAIEESKDLTTLTVEELAGSLKA 190
Query: 712 HEDRLSRPHENVDE----KVFQVKGDSSHKGKAEXXXXXXXXXXXXXXXXXXXXXXXXPA 879
HE R+ + E +D+ ++ G S+ KG +
Sbjct: 191 HEQRIKKGKEPLDQALQARLEFTGGQSTQKGGSRGRGSRGR------------------- 231
Query: 880 GDQRDFKSTIQCRHCNKPGHKDVDCWFKPKDEQKHAKFAEKSQEESYLFMVQ-----STK 1044
G + T C C K GH C D + F+E+ EE + M+ T
Sbjct: 232 GGRAKECRTATCYKCGKIGHIAKYC---KNDTSEKNLFSEEGNEEVGVLMLTRSDECETS 288
Query: 1045 QGVLND----VWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGNDKLIKVEGRGTVAIKT 1212
+G+ + +WY+D+G SNHM G +S+F D+ + + V+ G++ I V G GT+
Sbjct: 289 RGIEDSPDTSIWYLDTGASNHMCGQESLFSDLVKQEAGSVSFGDNSKIAVRGSGTIRHVQ 348
Query: 1213 SLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKEKVSGTTLFDVPMMSN 1392
G + +V Y P L N+LS+GQ+ME G S+L D ++++ + + M N
Sbjct: 349 KDGRVGEIRNVLYVPKLRTNILSMGQIMEKGNSVLMKDRGLYLRDR-NNRLIACEEMKEN 407
Query: 1393 RMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXXNMVHGLPKID-NVDF 1569
RM+ L+++ + + ++ EA WH R+GH +VHGLP I F
Sbjct: 408 RMYKLELNILQKKCLKLDHKD-EAMIWHYRFGHLNFGGLNELSKKELVHGLPGIKFEKKF 466
Query: 1570 CEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGSRYFMLFVDDYSRMSW 1749
CE CV GK R FP R L LIH+DLCGP+S S G +YF+ F+DD SR +W
Sbjct: 467 CEECVLGKHHRVGFPKSALYRTEEKLGLIHTDLCGPISPSSFSGKKYFISFIDDLSRKTW 526
Query: 1750 VYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEFNTFCEDNGIHRELTT 1929
VY L+ KSEAF+ FK F+ +VEK++G IK +R+DRGGE++S F +CED+GI R LT
Sbjct: 527 VYLLQEKSEAFEVFKRFRLMVEKETGRQIKGIRSDRGGEFISSSFMEYCEDHGIRRFLTA 586
Query: 1930 PYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYILNISPTKAVYNRTPF 2109
PY+PQQNGVAERKNRTI++M RSM+ + + + FWAEAV AVYI N P + TP
Sbjct: 587 PYSPQQNGVAERKNRTIMDMVRSMLKGKNMLEKFWAEAVQCAVYIQNRCPHSKLNGATPQ 646
Query: 2110 EAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYSTQSKGYKLYDPVNGK 2289
EAW G KP VSH ++FG +AYA V + R KLD++S+K + +GY ++K YKLY+PV K
Sbjct: 647 EAWSGRKPSVSHFKVFGSIAYAHVPAQLRTKLDDRSKKYILIGYDERAKAYKLYNPVTSK 706
Query: 2290 SLISRDVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXXXXXXXXXXXXXXXXX 2469
L+SRDV +EE WN+ + +S S +D
Sbjct: 707 MLVSRDVQVDEEGEWNWENRSASSDLGTANSDRD--------RTEIRRTGSSAIRIGSSD 758
Query: 2470 XXXXXXXXXXXXXDDEAEPRYKSLHDIYASCS-----FALFVTEPACFKEANEVAEWKEA 2634
D+ PR ++LHD+Y S + L TE F+EA +W++A
Sbjct: 759 NSGGRIHEQIEEEDEAVRPRTRTLHDLYESTNEMHVICLLIGTEEIKFEEAVLDEKWRKA 818
Query: 2635 MLDELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSVKRYKARLVAKGYSQHQGI 2814
M +E+ +IE N TWEL LP PIGLKWV+K K+NADG V+RYKARLVAKGY Q +GI
Sbjct: 819 MNEEIVSIEKNGTWELTDLPTETRPIGLKWVYKKKYNADGEVERYKARLVAKGYKQQKGI 878
Query: 2815 DYDETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGELQEEVYVSQPEGFEVCGN 2994
DYDE F+PV R E++R+L+S+AA + ++Q DVKSAFLNG L+EE+YV QP G+ G
Sbjct: 879 DYDEVFAPVTRIESIRLLISVAAQNGWTIHQMDVKSAFLNGILEEEIYVEQPLGYMRRGE 938
Query: 2995 EHKFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPTLYVKRAGKNDFLVVVIYV 3174
E K KLKKALYGLKQAPRAW +R+D+YF NG+ + E LY+K++G+ D L+V +YV
Sbjct: 939 EEKVLKLKKALYGLKQAPRAWNERIDTYFRNNGYCQCPYEHALYLKKSGR-DILLVALYV 997
Query: 3175 DDMIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQETSGIFLSQSKYAKDLLV 3354
DD+I+MG+ L+ +FK M EFEMTDLG + YFLGLEV+Q +GIF+SQ +YA+++L
Sbjct: 998 DDLIFMGNEVGLVRNFKEVMMKEFEMTDLGSMSYFLGLEVEQRRTGIFVSQRRYAEEVLK 1057
Query: 3355 KFNMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLNYLTHTRPDIMYSVNVLSR 3534
+M C V TPM KL + V+ ++YRS+IG L YLT TRPD+M SV ++SR
Sbjct: 1058 NASMMECNPVSTPMEPGTKLSKFGEGDRVDANIYRSLIGKLRYLTSTRPDLMLSVGIVSR 1117
Query: 3535 FMHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYSDSDWGGCVDNRKSTSGQV 3714
+M + H A KR+LRY+ GT +GL ++K+ + + GYSDSDW G +D+R+STSG V
Sbjct: 1118 YMEESRYSHWKAVKRILRYIKGTQSYGLMFTKSDSFQLVGYSDSDWSGDIDDRRSTSGYV 1177
Query: 3715 FYLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRRMLVDFHNEQYGPTTIFCD 3894
F++G+TA +W SKKQ +V LS+ EAEYIA + A WLR +L + + I D
Sbjct: 1178 FFMGNTAFTWVSKKQPIVTLSTCEAEYIAASWTVQHATWLRNLLKELEISKQDKVVIRID 1237
Query: 3895 NKATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIELKYCPTNEQVADVFTKALSQAKH 4074
NK++I + +NP H R+KHIDIR+HFIR+ EG++EL++ + +Q+AD+FTK L
Sbjct: 1238 NKSSIELAKNPISHDRSKHIDIRYHFIREKVKEGVVELEHVESKKQIADIFTKPLPIVLF 1297
Query: 4075 DYFRQELGVCKFRAR 4119
+ R++LG+ AR
Sbjct: 1298 EDLREQLGMTSGEAR 1312
>gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
Length = 1318
Score = 1026 bits (2654), Expect = 0.0
Identities = 562/1332 (42%), Positives = 800/1332 (60%), Gaps = 21/1332 (1%)
Frame = +1
Query: 169 PIFRGENYHFWSLKMMTMFKSQELWDLIENGFEDTHPEQPN------QQLRDNRKKDAKA 330
P+F G NY W++KM K+ +LW+++E G D Q N +Q + K KA
Sbjct: 12 PVFNGNNYPMWAVKMKAYLKAFDLWEVVEVG-GDPPARQANPTIAQMKQYNEEVAKRFKA 70
Query: 331 LFFIQQAVDDLIFPRIXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQKNE 510
L I AV D IF RI +K+E+ G + +++ L R FE L M+ E
Sbjct: 71 LSCIHSAVTDAIFVRIMACESAKEAWDKIKEEFHGSDRTRQIQILNLLREFEVLKMKDEE 130
Query: 511 KVQEYLSRVSGIVNHMKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTFDE 690
+++Y +V +VN ++ FGE+++ +V K L SLP KF+ ++++E+SKDL+ + E
Sbjct: 131 TMKDYSDKVLRVVNQLRLFGENITERRVVNKFLVSLPEKFESKISSLEDSKDLTTMSVSE 190
Query: 691 LMGSLLAHEDRLS-RPHENVD-----EKVFQVKGDSSHKGKAEXXXXXXXXXXXXXXXXX 852
L+ +L A E R + R ++V+ +V + SHK K+E
Sbjct: 191 LINALQAQEQRRALRQEDHVEAALAARRVDKRTSSGSHK-KSEYEKKDKDKRYEEKKQGK 249
Query: 853 XXXXXXXPAGDQRD-------FKSTIQCRHCNKPGHKDVDCWFKP-KDEQKHAKFAEKSQ 1008
+++ ++ ++CR CN+ GH + C K + E+K A +K
Sbjct: 250 KWQFPPCSYCKKKNHIERYCWYRPHVKCRACNQKGHVEKVCKNKENRVEEKAAIVEQKED 309
Query: 1009 EESYLFMVQSTKQGVLNDVWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGNDKLIKVEG 1188
E LFMV + + +W +DS CS H++G F D+++ KS V +G+ L+K+ G
Sbjct: 310 AEETLFMVIESNDSKKDSIWLIDSACSTHITGKIKNFLDLNKAYKSTVEIGDGNLLKIAG 369
Query: 1189 RGTVAIKTSLGHTKLVHDVQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKEKVSGTTL 1368
RGTV I T G K + +V +AP + NLLSVGQL++ SLLF D C+I + SG +
Sbjct: 370 RGTVGITTKKG-MKTIANVCFAPEVTQNLLSVGQLVKEKNSLLFKDELCTIFDP-SGREI 427
Query: 1369 FDVPMMSNRMFPLDVSSQEGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXXNMVHGLP 1548
V M N+ FPLD++ + G+ A N EA WH R GH N+V+ +P
Sbjct: 428 ATVKMR-NKCFPLDLN-EAGHMAYKCVSN-EARLWHRRLGHINYQFIKNMGSLNLVNDMP 484
Query: 1549 KIDNVD-FCEGCVYGKQSRAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGSRYFMLFV 1725
I V+ CE C+ GKQSR FP R + L+LIH+D+CGP+ SL G++YF+LF+
Sbjct: 485 IITEVEKTCEVCLQGKQSRHPFPKQSQTRTANRLQLIHTDICGPIGTLSLNGNKYFILFI 544
Query: 1726 DDYSRMSWVYFLKSKSEAFDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEFNTFCEDN 1905
DD+SR W++FLK KSEA F FK LVEKQ+ IK LR+D G EY S EF
Sbjct: 545 DDFSRFCWIFFLKQKSEAIQYFMKFKVLVEKQTDQKIKALRSDNGSEYTSNEFKALLTQE 604
Query: 1906 GIHRELTTPYTPQQNGVAERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYILNISPTK 2085
GI + LT PY+PQQNGV+ERKNRTI+EM R ++ + +PK+FWAEA AV + N+ PT
Sbjct: 605 GIKQFLTVPYSPQQNGVSERKNRTIMEMIRCLLFEQQMPKYFWAEAANFAVTLQNLIPTT 664
Query: 2086 AVYNRTPFEAWRGTKPEVSHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYSTQSKGYK 2265
A+ + TPFE W G KP +S++++FGC+AYA V R KLD K+Q + +GYS+ SKGY+
Sbjct: 665 ALNSMTPFEVWHGYKPSISNVKVFGCIAYAQVPQQKRTKLDSKTQISINLGYSSVSKGYR 724
Query: 2266 LYDPVNGKSLISRDVVFNEEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXXXXXXXXX 2445
L++ K ISRDVVFNE+ WN+ E ++ + DVF+ H
Sbjct: 725 LFNVETKKVFISRDVVFNEDIHWNWMKNEIAENNNDNVAVNLDVFEEEAGHELDDNI--- 781
Query: 2446 XXXXXXXXXXXXXXXXXXXXXDDEAEPRYKSLHDIYASCSFALFVTEPACFKEANEVAEW 2625
DD +SL DIY C+ A +T+P + EA +W
Sbjct: 782 ---------------------DDMPVRGIRSLQDIYEQCNVA--ITDPCSYIEAASDEQW 818
Query: 2626 KEAMLDELKAIEHNHTWELVTLPEGKTPIGLKWVFKIKHNADGSVKRYKARLVAKGYSQH 2805
K AM E+ I+ N TW LV P+ + I +KW+F+ K N+DGS+ + KARLV +G+SQ
Sbjct: 819 KLAMEAEMTMIKRNQTWILVDRPKHQRVISVKWIFRTKLNSDGSINKLKARLVVRGFSQV 878
Query: 2806 QGIDYDETFSPVARFETVRILLSIAAMLNYPVYQFDVKSAFLNGELQEEVYVSQPEGFEV 2985
G+D+ ETF+PVAR +T+R+L+++A + ++ DVKSAFLNG + E++YV QPEGF
Sbjct: 879 HGVDFFETFAPVARHDTIRLLVALAGREKWRIWHMDVKSAFLNGTISEDIYVEQPEGFVE 938
Query: 2986 CGNEHKFYKLKKALYGLKQAPRAWYKRVDSYFLKNGFLRSENEPTLYVKRAGKNDFLVVV 3165
G E K KL KALYGLKQAPRAWYK++D+Y N F SE+EPTLYVK + L+V
Sbjct: 939 KGKEDKVCKLIKALYGLKQAPRAWYKKIDAYLRSNKFFCSESEPTLYVKSSLGKIQLIVS 998
Query: 3166 IYVDDMIYMGSNESLIDDFKSSMQSEFEMTDLGKLQYFLGLEVKQETSGIFLSQSKYAKD 3345
+YVDD++ G N+S ++ F++ M+SEF+M+DLG++ YFLGLE++Q + I L Q KYA +
Sbjct: 999 VYVDDLLITGPNKSDLNSFRNKMKSEFDMSDLGEMSYFLGLEIQQRSDFICLHQKKYAGE 1058
Query: 3346 LLVKFNMHNCKAVGTPMITNEKLQVEDGTEAVNPSLYRSIIGGLNYLTHTRPDIMYSVNV 3525
LL +F M CK V TP+ T KL +DG+ V+ + YR +IG L YL+ +RPDIMY+ ++
Sbjct: 1059 LLKRFKMEGCKPVSTPLTTGTKLCKDDGSTLVDVTQYRKLIGCLLYLSASRPDIMYTTSL 1118
Query: 3526 LSRFMHKPTRLHLGAAKRVLRYVAGTVDFGLWYSKTTNGTMYGYSDSDWGGCVDNRKSTS 3705
LSRFM PT+ HL AAKRVLRYV GT+++GL Y + N + GYSDSDW G D+ KSTS
Sbjct: 1119 LSRFMQSPTKTHLTAAKRVLRYVKGTLNYGLLYGQVENKELEGYSDSDWAGSYDDSKSTS 1178
Query: 3706 GQVFYLGSTAVSWSSKKQDVVALSSSEAEYIAVASAACQAIWLRRMLVDFHNEQYGPTTI 3885
G F GS SW+SKKQD+VA SS+EAEY+A ASA QA+WLR++L+D EQ PT +
Sbjct: 1179 GYCFSFGSAMFSWNSKKQDIVAQSSAEAEYVAAASATNQALWLRKVLLDLKFEQINPTVL 1238
Query: 3886 FCDNKATIAMTRNPAFHSRTKHIDIRFHFIRDLTSEGIIELKYCPTNEQVADVFTKALSQ 4065
+ DN++ IA+ +NP HSRTKHI I+FH IR+ + + + YC T++Q+AD+FTK L +
Sbjct: 1239 WLDNQSAIALAKNPINHSRTKHIRIKFHVIREAVTNNEVVVNYCGTDDQIADIFTKGLCR 1298
Query: 4066 AKHDYFRQELGV 4101
K + R +LG+
Sbjct: 1299 EKFELLRSKLGM 1310
>gb|PPD66864.1| hypothetical protein GOBAR_DD36257 [Gossypium barbadense]
Length = 2540
Score = 1018 bits (2631), Expect = 0.0
Identities = 544/1364 (39%), Positives = 804/1364 (58%), Gaps = 21/1364 (1%)
Frame = +1
Query: 88 YSVPTLVFALISVMAMNGTSASSQPLIPIFRGENYHFWSLKMMTMFKSQELWDLIENGFE 267
Y V + + ++MA +G S ++ P +F GE +H W +KM T ++ +LW+++ E
Sbjct: 972 YQVTRQISGVRNLMASSGFSPAAPP---VFNGEGFHIWLVKMKTYLQAFDLWEVVNTDAE 1028
Query: 268 DTHPEQPN------QQLRDNRKKDAKALFFIQQAVDDLIFPRIXXXXXXXXXXXXLKQEY 429
P + N +Q D R K KA+ IQ V D+IF RI LK+E+
Sbjct: 1029 PA-PLRANPTVAQIRQHADERTKRHKAMSCIQNCVSDVIFTRIMACETPKQAWDKLKEEF 1087
Query: 430 MGDKKVIAVKMQTLRRNFETLGMQKNEKVQEYLSRVSGIVNHMKSFGESLSNETIVCKVL 609
G ++ ++ LRR+FE L M++ E V++Y R+ +VN ++ GE IV KVL
Sbjct: 1088 QGTERTRQQQLLNLRRDFENLKMKEEETVKQYSDRIMAVVNSIRLLGEHFDEARIVEKVL 1147
Query: 610 RSLPPKFDHVVAAIEESKDLSAYTFDELMGSLLAHEDRLSRPHENVDEKVFQVKG----- 774
+LP +++ ++++E+S+DL++ + EL+ + A E R + E+ E FQ K
Sbjct: 1148 STLPERYEAKISSLEDSRDLASISLTELINTFYAQEQRRASRAEDHQEGAFQAKARETSS 1207
Query: 775 DSSHKGKAEXXXXXXXXXXXXXXXXXXXXXXXXPAGDQRDFKSTIQCRHCNKPGHKDVDC 954
++ +GK D+ F+ C+HC K GH + C
Sbjct: 1208 TNAQRGKRPWKNRPKPDAARSNDQPCRYCKKPGHPEDRCWFRPDAVCQHCKKKGHVERVC 1267
Query: 955 WFKPKDEQKH-------AKFAEKS--QEESYLFMVQSTKQGVLNDVWYVDSGCSNHMSGI 1107
+ K Q A+ AE S QEE + + + W +DSGC+NHMS
Sbjct: 1268 KNRSKPRQNQFQQSKVEARVAEDSSDQEEQVFAVSCVASEKKCSKGWLLDSGCTNHMSPD 1327
Query: 1108 KSIFKDIDELQKSEVALGNDKLIKVEGRGTVAIKTSLGHTKLVHDVQYAPLLAHNLLSVG 1287
S+FK +D K++V +GN + I+ EGRG V I T G+ K++ +V P + NLLS+
Sbjct: 1328 ASLFKTLDRSYKTKVKVGNGQFIRAEGRGEVLISTPTGN-KIIPNVLLVPQIDRNLLSIA 1386
Query: 1288 QLMENGYSLLFDDGYCSIKEKVSGTTLFDVPMMSNRMFPLDVSSQEGNGAMVARENAEAN 1467
QL+E GYS++F D C I + SG++L V M +++ F + ++ + + E+++
Sbjct: 1387 QLLEKGYSVVFKDKQCHITDP-SGSSLMTVTM-TDKCFEVHWANDSNSAYTASVEDSKL- 1443
Query: 1468 KWHLRYGHXXXXXXXXXXXXNMVHGLPK-IDNVDFCEGCVYGKQSRAAFPVGKSRRASVC 1644
WH R GH M +++ D CE C GKQ+R FP + RA
Sbjct: 1444 -WHQRLGHANFRSMARLAKEGMAENFTSSVEHDDVCEVCQMGKQARLPFPTNSAWRAFER 1502
Query: 1645 LELIHSDLCGPMSVESLGGSRYFMLFVDDYSRMSWVYFLKSKSEAFDNFKHFKALVEKQS 1824
L+L+HSD+CGPM ESL + YF+LF+DD++R W++FLK KSE F FK VE ++
Sbjct: 1503 LQLVHSDVCGPMRTESLSKNSYFILFIDDFTRFCWIFFLKHKSEVAQVFVKFKTTVETET 1562
Query: 1825 GCHIKTLRTDRGGEYLSKEFNTFCEDNGIHRELTTPYTPQQNGVAERKNRTIVEMGRSMM 2004
GC +K++R+D G EY S +F C D GI +LT YTPQQNGV+ERKNR++++M R ++
Sbjct: 1563 GCKLKSIRSDNGTEYTSAQFQAICNDAGIKHQLTNVYTPQQNGVSERKNRSLMDMARCLL 1622
Query: 2005 NARGVPKHFWAEAVATAVYILNISPTKAVYNRTPFEAWRGTKPEVSHLRIFGCVAYALVN 2184
+ +PK WAEAV TAVY+ N PT ++TPFEAW G KP ++HL++FGC+ YA +
Sbjct: 1623 FEKKLPKTMWAEAVNTAVYLQNRLPT----SKTPFEAWFGFKPSLAHLKVFGCLCYAQIP 1678
Query: 2185 SSSRKKLDEKSQKCVFVGYSTQSKGYKLYDPVNGKSLISRDVVFNEEESWNFTSVEPNSS 2364
+++R KL E++Q V +GYS+ KGY++ DP+ K +SRDV+F+E+ WN+ +P ++
Sbjct: 1679 AANRDKLSERAQPSVLIGYSSVKKGYRVLDPLTNKVQVSRDVIFDEKACWNWEKSKPEAT 1738
Query: 2365 SKIPYSSQDDVFDTPVVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEAEPRYKSLH 2544
S+ +Q ++ DD + L
Sbjct: 1739 SEDLVPNQAEL----------------------------EHLGPEMDVDDAPVRGTRPLD 1770
Query: 2545 DIYASCSFALFVTEPACFKEANEVAEWKEAMLDELKAIEHNHTWELVTLPEGKTPIGLKW 2724
+IY A + EP+ F+EA WK+AM+DE+ I N TWELV P + IG+KW
Sbjct: 1771 EIYERAQAA--IAEPSSFEEAEADEGWKQAMVDEINMIVKNQTWELVKKPANRKTIGVKW 1828
Query: 2725 VFKIKHNADGSVKRYKARLVAKGYSQHQGIDYDETFSPVARFETVRILLSIAAMLNYPVY 2904
V+++KHNADGS+ + KARLV KG+SQ G+DY ETF+PVAR +T+R+L+++AA + ++
Sbjct: 1829 VYRVKHNADGSLNKLKARLVVKGFSQRYGLDYLETFAPVARLDTIRLLIAVAAQNQWTIH 1888
Query: 2905 QFDVKSAFLNGELQEEVYVSQPEGFEVCGNEHKFYKLKKALYGLKQAPRAWYKRVDSYFL 3084
Q DVKSAFLNG L+EE+Y+ QP GF + G EH Y+L+KALYGLKQAPRAWY R++SY +
Sbjct: 1889 QMDVKSAFLNGFLEEEIYIEQPLGFIMPGKEHLVYRLRKALYGLKQAPRAWYARIESYLV 1948
Query: 3085 KNGFLRSENEPTLYVKRAGKNDFLVVVIYVDDMIYMGSNESLIDDFKSSMQSEFEMTDLG 3264
GF RS +EPTLYVKR G L+V +YVDD++ G ++ ++ +FK+ M+ FEM+DLG
Sbjct: 1949 SLGFERSASEPTLYVKRNGAETQLIVSLYVDDLLVTGGDKFMLANFKTKMKEMFEMSDLG 2008
Query: 3265 KLQYFLGLEVKQETSGIFLSQSKYAKDLLVKFNMHNCKAVGTPMITNEKLQVEDGTEAVN 3444
+ YFLG+EV Q GI L Q +A +L KF+M NCK + TPM KL ++ E+V
Sbjct: 2009 LMTYFLGMEVNQVEGGILLKQKTFALKVLDKFSMENCKPMNTPMAIGMKLSSQEEHESVC 2068
Query: 3445 PSLYRSIIGGLNYLTHTRPDIMYSVNVLSRFMHKPTRLHLGAAKRVLRYVAGTVDFGLWY 3624
YRS IG L YLT TRPDI+++V++LSRFMH + H A KRVLRY+ GT++ G+ +
Sbjct: 2069 EIDYRSFIGCLLYLTATRPDILFAVSMLSRFMHCCNQQHYKAGKRVLRYIKGTLNHGICF 2128
Query: 3625 SKTTNGTMYGYSDSDWGGCVDNRKSTSGQVFYLGSTAVSWSSKKQDVVALSSSEAEYIAV 3804
+ + GY+DSDW G D+ KSTS F LGS + WSS+KQ +VA S++EAEY+A
Sbjct: 2129 KRVKELKLIGYTDSDWAGSKDDMKSTSSYTFTLGSAMICWSSRKQTMVAQSTAEAEYVAA 2188
Query: 3805 ASAACQAIWLRRMLVDFHNEQYGPTTIFCDNKATIAMTRNPAFHSRTKHIDIRFHFIRDL 3984
A+A QA+WLR++L D + Q T I CDNK+ +A+ +NPAFH RTKH DI+ H IR++
Sbjct: 2189 ANAVNQAVWLRKILSDLNLHQNEATVIHCDNKSAVAIAKNPAFHGRTKHFDIKLHVIREM 2248
Query: 3985 TSEGIIELKYCPTNEQVADVFTKALSQAKHDYFRQELGVCKFRA 4116
IEL +C + ++AD+FTK+L ++ ++ELGVC A
Sbjct: 2249 EQAREIELIHCSSENRIADIFTKSLGVSRFLSLKRELGVCCIEA 2292
>gb|ACN78973.1| copia-type polyprotein [Glycine max]
gb|ACN78980.1| copia-type polyprotein [Glycine max]
Length = 1042
Score = 950 bits (2455), Expect = 0.0
Identities = 489/1010 (48%), Positives = 660/1010 (65%), Gaps = 8/1010 (0%)
Frame = +1
Query: 1102 GIKSIFKDIDELQKSEVALGNDKLIKVEGRGTVAIKTSLGHTKLVHDVQYAPLLAHNLLS 1281
G K F ++D+ K V+ G+ ++++G+GT+ I G KL+ DV Y P L N+LS
Sbjct: 38 GCKEKFVELDKKVKGNVSFGDSSKVQIQGKGTILISLKDGAHKLITDVYYVPKLKSNILS 97
Query: 1282 VGQLMENGYSLLFDDGYCSIKEKVSGTTLFDVPMMSNRMFPLDVSSQEGNGAMVARENAE 1461
+GQL+E GY + D +++K S + V M NRMF L++ + E + A E
Sbjct: 98 LGQLVEKGYEIHMKDCCLWLRDKNSNL-IAKVFMSRNRMFTLNIKTNEAK-CLKASIKDE 155
Query: 1462 ANKWHLRYGHXXXXXXXXXXXXNMVHGLPKIDNVD-FCEGCVYGKQSRAAFPVGKSRRAS 1638
+ WH+R+GH MV G+P+I++ + CE C+ GK +R +FP + RA
Sbjct: 156 SWCWHMRFGHLNFGALKSLGEEKMVKGMPQINHPNQLCEACLLGKHARRSFPKEANSRAK 215
Query: 1639 VCLELIHSDLCGPMSVESLGGSRYFMLFVDDYSRMSWVYFLKSKSEAFDNFKHFKALVEK 1818
L+L+++D+CGP++ S G ++YF+LF+DDYSR +WVYFLK KSEAF FK+FKALVEK
Sbjct: 216 EPLQLVYTDVCGPINPPSCGNNKYFLLFIDDYSRKTWVYFLKQKSEAFVAFKNFKALVEK 275
Query: 1819 QSGCHIKTLRTDRGGEYLSKEFNTFCEDNGIHRELTTPYTPQQNGVAERKNRTIVEMGRS 1998
+SG IK LR+DRGGE+ SKEFN FCE GI R LT P +PQQNGVAERKNRTI+ M R
Sbjct: 276 ESGYVIKALRSDRGGEFTSKEFNEFCEKYGIRRPLTVPRSPQQNGVAERKNRTILNMTRC 335
Query: 1999 MMNARGVPKHFWAEAVATAVYILNISPTKAVYNRTPFEAWRGTKPEVSHLRIFGCVAYAL 2178
M+ A+ +PK FWAEAVA AVY+ N SPTK V ++TP EAW G KP V HLR+FG +AYA
Sbjct: 336 MLKAKNMPKEFWAEAVACAVYLSNRSPTKNVKDQTPQEAWSGVKPRVDHLRVFGSIAYAH 395
Query: 2179 VNSSSRKKLDEKSQKCVFVGYSTQSKGYKLYDPVNGKSLISRDVVFNEEESWNFTSVEPN 2358
V R KLD++S+K VF+GY SKGYKLY+P NGK+++SRDV F EE +WN+ E +
Sbjct: 396 VPDQGRFKLDDRSEKHVFIGYDASSKGYKLYNPNNGKTIVSRDVEFYEEGTWNWEEKE-D 454
Query: 2359 SSSKIPYSSQ-DDVFDTPVVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEAEPRYK 2535
+ PY + D+ TP E R +
Sbjct: 455 TYDFFPYFEEIDEEALTP----------NDSTPALSPTPSTNEASSSSEGSSSERPRRMR 504
Query: 2536 SLHDIYASCS-----FALFV-TEPACFKEANEVAEWKEAMLDELKAIEHNHTWELVTLPE 2697
++ ++Y F LFV ++P F EA + W++AM +E+KAIE N+TWEL +LP+
Sbjct: 505 NIQELYDETEVINDLFCLFVDSKPLNFDEAMKDKRWRQAMEEEIKAIEKNNTWELSSLPK 564
Query: 2698 GKTPIGLKWVFKIKHNADGSVKRYKARLVAKGYSQHQGIDYDETFSPVARFETVRILLSI 2877
G IG+KWVFKIK NA G V+R+KARLVAKGY Q +DYDE F+PVAR ET+R+L+S+
Sbjct: 565 GHEAIGVKWVFKIKKNAKGEVERHKARLVAKGYKQQYEVDYDEVFAPVARMETIRLLISL 624
Query: 2878 AAMLNYPVYQFDVKSAFLNGELQEEVYVSQPEGFEVCGNEHKFYKLKKALYGLKQAPRAW 3057
AA + + ++QFDVKSAFLNG L+E+VYV QP GF + G E K KL KALYGLKQAPRAW
Sbjct: 625 AAQMKWRIFQFDVKSAFLNGYLEEDVYVEQPMGFVIEGQEGKVLKLNKALYGLKQAPRAW 684
Query: 3058 YKRVDSYFLKNGFLRSENEPTLYVKRAGKNDFLVVVIYVDDMIYMGSNESLIDDFKSSMQ 3237
+D YF NGF+ +NE LYVK D L + +YVDD+I+ G+N +L +DFK SM
Sbjct: 685 NTHIDKYFQDNGFVHCQNEYALYVKTFNNGDVLFICLYVDDLIFTGNNPNLFEDFKESMS 744
Query: 3238 SEFEMTDLGKLQYFLGLEVKQETSGIFLSQSKYAKDLLVKFNMHNCKAVGTPMITNEKLQ 3417
EF+MTD+G + Y+LG+EVKQ +GIF+SQ +Y K++L KFNM +C V TPM KL
Sbjct: 745 REFDMTDMGLMSYYLGMEVKQTQNGIFVSQERYTKEVLKKFNMLDCNPVNTPMEGGLKLS 804
Query: 3418 VEDGTEAVNPSLYRSIIGGLNYLTHTRPDIMYSVNVLSRFMHKPTRLHLGAAKRVLRYVA 3597
D E V+ ++++S++G L YLT+TRPDI+Y+V V+ RFM PT HL AAKR+L Y+
Sbjct: 805 KFDEGEKVDSTIFKSLVGSLRYLTNTRPDILYAVGVVCRFMEAPTSPHLKAAKRILCYLK 864
Query: 3598 GTVDFGLWYSKTTNGTMYGYSDSDWGGCVDNRKSTSGQVFYLGSTAVSWSSKKQDVVALS 3777
GT+DFGL+YS + N + G+ DSD+ G VD+RKST+G VF++G +WSSKKQ +V LS
Sbjct: 865 GTIDFGLFYSPSNNYKLVGFCDSDFAGDVDDRKSTTGFVFFMGDCVFTWSSKKQGIVTLS 924
Query: 3778 SSEAEYIAVASAACQAIWLRRMLVDFHNEQYGPTTIFCDNKATIAMTRNPAFHSRTKHID 3957
+ EAEY+A S C AIWLRR+L + Q T I+ DN++ + +NP FH R+KHID
Sbjct: 925 TCEAEYVAATSCTCHAIWLRRLLEELQLLQKESTKIYVDNRSAQELAKNPVFHERSKHID 984
Query: 3958 IRFHFIRDLTSEGIIELKYCPTNEQVADVFTKALSQAKHDYFRQELGVCK 4107
R+HFIR+ ++ +EL + T +QVAD+FTK L R LGV K
Sbjct: 985 TRYHFIRECITKKEVELTHVKTQDQVADIFTKPLKFEDFRRLRARLGVQK 1034
>dbj|GAU26309.1| hypothetical protein TSUD_56070 [Trifolium subterraneum]
Length = 1071
Score = 942 bits (2435), Expect = 0.0
Identities = 491/1076 (45%), Positives = 678/1076 (63%), Gaps = 6/1076 (0%)
Frame = +1
Query: 898 KSTIQCRHCNKPGHKDVDCWFKPKDEQ-KHAKFA----EKSQEESYLFMVQSTKQGVLND 1062
K IQC +C + GH++ C K Q +HA E+SQ E +LFM
Sbjct: 48 KPQIQCNYCKRWGHREKFCRLKQNQSQPQHAHQVNFTDEQSQHEDHLFMASQECSSASKY 107
Query: 1063 VWYVDSGCSNHMSGIKSIFKDIDELQKSEVALGNDKLIKVEGRGTVAIKTSLGHTKLVHD 1242
VWYVDSGC HM+ S+F +D +++V LGN ++++ EG+GT+++ TS G K ++D
Sbjct: 108 VWYVDSGCMIHMAKEPSLFTSLDRAVRTKVKLGNGEIVQTEGKGTISVHTSKG-PKFIND 166
Query: 1243 VQYAPLLAHNLLSVGQLMENGYSLLFDDGYCSIKEKVSGTTLFDVPMMSNRMFPLDVSSQ 1422
V P L NLLSV QLM+ GYSL F + C I + + + + V M N FP+ ++
Sbjct: 167 VLLIPDLDQNLLSVAQLMKKGYSLSFKNNGCVIMDS-NDSEVVKVEMCGNS-FPISLNQT 224
Query: 1423 EGNGAMVARENAEANKWHLRYGHXXXXXXXXXXXXNMVHGLPKIDNVD-FCEGCVYGKQS 1599
A+V++ + ++ WH RYGH +MV +P I+ +D C C GK
Sbjct: 225 ----ALVSKHD-DSTLWHKRYGHFNMNALKFLQSHDMVKDMPPINCIDDLCNACQLGKMH 279
Query: 1600 RAAFPVGKSRRASVCLELIHSDLCGPMSVESLGGSRYFMLFVDDYSRMSWVYFLKSKSEA 1779
R +F RA LEL+H++LCGPMS+ SL ++YF+LF+DD +RM+WVYFL SK+
Sbjct: 280 RKSFQSANGTRARNKLELVHTNLCGPMSIPSLSQNKYFILFIDDLTRMTWVYFLTSKAHT 339
Query: 1780 FDNFKHFKALVEKQSGCHIKTLRTDRGGEYLSKEFNTFCEDNGIHRELTTPYTPQQNGVA 1959
F+ FK F+A+VE QSGC IK LR+D G EY S EFN FCED GI +LT YTP++NGV+
Sbjct: 340 FNVFKKFRAMVESQSGCKIKMLRSDNGKEYTSNEFNKFCEDEGIVHQLTVSYTPEKNGVS 399
Query: 1960 ERKNRTIVEMGRSMMNARGVPKHFWAEAVATAVYILNISPTKAVYNRTPFEAWRGTKPEV 2139
ERKNRT++EM R ++ + +PK FWAEA+ G KP
Sbjct: 400 ERKNRTVMEMARCLIAEKKLPKSFWAEAI-------------------------GVKPSA 434
Query: 2140 SHLRIFGCVAYALVNSSSRKKLDEKSQKCVFVGYSTQSKGYKLYDPVNGKSLISRDVVFN 2319
HL+IFG + YA V ++ R KLD+K++ +F GY++ SKGY++Y+ + +ISRD+ +
Sbjct: 435 KHLKIFGSICYAHVPAAKRSKLDDKAEMGIFWGYASSSKGYRVYNLKTKQIVISRDLDVD 494
Query: 2320 EEESWNFTSVEPNSSSKIPYSSQDDVFDTPVVHXXXXXXXXXXXXXXXXXXXXXXXXXXX 2499
E WN+ + E + SS D
Sbjct: 495 ENAYWNWENNEVQNCELKSTSSASD-----------------------NQQNAANEDEYE 531
Query: 2500 XXXDDEAEPRYKSLHDIYASCSFALFVTEPACFKEANEVAEWKEAMLDELKAIEHNHTWE 2679
D + KSL +IY +C+F V EP+CF+EA+ + EWK+AM +EL AI N TWE
Sbjct: 532 ITESDSPVLKTKSLAEIYENCNFV--VNEPSCFEEASMLTEWKDAMKEELLAINKNGTWE 589
Query: 2680 LVTLPEGKTPIGLKWVFKIKHNADGSVKRYKARLVAKGYSQHQGIDYDETFSPVARFETV 2859
L P+ K IG+KWV++ K N DGS+ ++KARLV KGYSQ G+DY +TF+ VAR ET+
Sbjct: 590 LTPRPKDKNVIGVKWVYRTKLNPDGSIHKHKARLVVKGYSQMAGVDYGDTFASVARHETI 649
Query: 2860 RILLSIAAMLNYPVYQFDVKSAFLNGELQEEVYVSQPEGFEVCGNEHKFYKLKKALYGLK 3039
R++++++A + + DVKSAFLNG LQEE+YV QP GF V G+E K Y+L KALYGLK
Sbjct: 650 RLIVALSAQNGWKFFHLDVKSAFLNGVLQEEIYVEQPTGFIVSGHEDKVYRLYKALYGLK 709
Query: 3040 QAPRAWYKRVDSYFLKNGFLRSENEPTLYVKRAGKNDFLVVVIYVDDMIYMGSNESLIDD 3219
QAPRAWY R+DS+FL+N F RS+NEPTLYVK G L+V +YVDD++ G + + I++
Sbjct: 710 QAPRAWYSRIDSHFLENDFKRSQNEPTLYVKDYGNGKRLIVSLYVDDLLVTGDDINAINN 769
Query: 3220 FKSSMQSEFEMTDLGKLQYFLGLEVKQETSGIFLSQSKYAKDLLVKFNMHNCKAVGTPMI 3399
FK SM FEMTDLG+++YFLG+E+ Q GIFLSQ KYA D+L KF + +CK V TP+
Sbjct: 770 FKKSMLQAFEMTDLGEMKYFLGMELYQLDDGIFLSQRKYANDVLKKFKLESCKPVSTPLA 829
Query: 3400 TNEKLQVEDGTEAVNPSLYRSIIGGLNYLTHTRPDIMYSVNVLSRFMHKPTRLHLGAAKR 3579
NEKL +DG + + YRS+IG L YLT TRPD+M+S ++LSRF H P+ H G KR
Sbjct: 830 VNEKLSKDDGDVKADVTQYRSLIGCLLYLTATRPDLMFSASLLSRFRHSPSVTHFGVGKR 889
Query: 3580 VLRYVAGTVDFGLWYSKTTNGTMYGYSDSDWGGCVDNRKSTSGQVFYLGSTAVSWSSKKQ 3759
VLRY+ GT DFG+WY+K ++G + G+ DSDW G VD+ KST+G VF LGS SW+SKKQ
Sbjct: 890 VLRYIKGTSDFGIWYNK-SDGKLEGFVDSDWAGSVDDSKSTTGYVFSLGSGVFSWNSKKQ 948
Query: 3760 DVVALSSSEAEYIAVASAACQAIWLRRMLVDFHNEQYGPTTIFCDNKATIAMTRNPAFHS 3939
DVVA SS+EAEYIA A+A+ QAIW++++L D ++ Q P ++CDNK+ I++ +NP H
Sbjct: 949 DVVAQSSAEAEYIAAAAASNQAIWIKKVLTDLNHGQMEPIVLWCDNKSAISIAKNPIQHG 1008
Query: 3940 RTKHIDIRFHFIRDLTSEGIIELKYCPTNEQVADVFTKALSQAKHDYFRQELGVCK 4107
RTKHI+++FH IR+ G ++L +C + EQ+AD+ TKAL AK R +LGV K
Sbjct: 1009 RTKHINVKFHVIREAEKNGDVQLMHCSSEEQLADILTKALPSAKFMELRSKLGVFK 1064
>gb|KYP38330.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1189
Score = 936 bits (2420), Expect = 0.0
Identities = 521/1230 (42%), Positives = 728/1230 (59%), Gaps = 18/1230 (1%)
Frame = +1
Query: 211 MMTMFKSQELWDLIENGFED--THPEQPNQQLRDNRK---KDAKALFFIQQAVDDLIFPR 375
M + SQ+ WD++ENG E+ T N QL + KD AL+ + +AVD+ F +
Sbjct: 1 MKALLGSQDNWDVVENGQEEPVTTEGYTNAQLNALKVVQGKDKAALYLLYRAVDESSFEK 60
Query: 376 IXXXXXXXXXXXXLKQEYMGDKKVIAVKMQTLRRNFETLGMQKNEKVQEYLSRVSGIVNH 555
I L++ GD++V V++QTLR E + M++++ V E+++RV + N
Sbjct: 61 IANAKSSKEAWDILEKAKKGDERVKKVQLQTLRGELENMRMKESKGVSEFITRVETVANK 120
Query: 556 MKSFGESLSNETIVCKVLRSLPPKFDHVVAAIEESKDLSAYTFDELMGSLLAHE-DRLSR 732
+ GE+L + +V K+LRSL F+++V AIEESKDLS T +EL GSL A + D L R
Sbjct: 121 LNRNGENLPSSRVVEKILRSLTDDFENIVCAIEESKDLSTLTVEELTGSLEAFDMDMLPR 180
Query: 733 PHENVDEKVFQVKGDSSHKGKAEXXXXXXXXXXXXXXXXXXXXXXXXPAGDQRDFKSTIQ 912
V + +G+A G + + + I+
Sbjct: 181 -------SVTRRGQTQGGRGQARGGRGQTW-------------------GGRSNTNNIIE 214
Query: 913 CRHCNKPGHKDVDCWFKPKDEQKHAKFAEKSQEESYLFMVQSTKQGVLNDVWYVDSGCSN 1092
C +C K GH +C+ + + K S + S N VWY+D+G SN
Sbjct: 215 CYNCGKYGHVAKECYSIKCYNCGNLETEIKPSCSSEIKPSCSD-----NSVWYLDTGASN 269
Query: 1093 HMSGIKSIFKDIDELQKSEVALGNDKLIKVEGRGTVAIKTSLGHTKLVHDVQYAPLLAHN 1272
HM G + +FK + + + V+ G+ + ++GRGT+ + G + +V Y P L N
Sbjct: 270 HMCGDEHLFKMLSKEEFGSVSFGDASKVVIKGRGTIWYQQRNGKIGEIRNVYYIPDLKSN 329
Query: 1273 LLSVGQLMENGYSLLFDDGYCSIKEKVSGTTLFDVPMMSNRMFPLDVSSQEGNGAMVARE 1452
+LS+GQLME GYS+L D +K+K+ G + V M N M+ +++ + + E
Sbjct: 330 ILSMGQLMEKGYSVLMKDRELQLKDKL-GRLIAQVEMKKNLMYKVELKIVQDECMQLDLE 388
Query: 1453 NAEANKWHLRYGHXXXXXXXXXXXXNMVHGLPKID-NVDFCEGCVYGKQSRAAFPVGKSR 1629
+ +A KWHLR+GH MV GLPK++ FCE CV GK +R +FP
Sbjct: 389 D-KAMKWHLRFGHLHFGGLTELVKKEMVFGLPKMEFEKKFCEECVIGKHARTSFPRSSKY 447
Query: 1630 RASVCLELIHSDLCGPMSVESLGGSRYFMLFVDDYSRMSWVYFLKSKSEAFDNFKHFKAL 1809
+A LELIH+DLCGP++ ES G +YF+ F+DD+SR +WVYFLK K E F+ FK FK +
Sbjct: 448 QAKEKLELIHTDLCGPITPESFSGKKYFVSFIDDFSRKTWVYFLKEKLEVFETFKKFKVM 507
Query: 1810 VEKQSGCHIKTLRTDRGGEYLSKEFNTFCEDNGIHRELTTPYTPQQNGVAERKNRTIVEM 1989
VEK++ IK +R+DRGGE+ S EFN +CE++GI LT PY+PQQNGVAERKNRTI++M
Sbjct: 508 VEKETTKFIKAVRSDRGGEFTSVEFNKYCEEHGIKHFLTAPYSPQQNGVAERKNRTILDM 567
Query: 1990 GRSMMNARGVPKHFWAEAVATAVYILNISPTKAVYNRTPFEAWRGTKPEVSHLRIFGCVA 2169
RSM+ + +PK+FWAEAV AVY+ N P + + +TP E W G KP VSHLR+FG +A
Sbjct: 568 VRSMLKGKNMPKNFWAEAVQCAVYVQNRCPHENLGEKTPQEIWSGMKPSVSHLRVFGSLA 627
Query: 2170 YALVNSSSRKKLDEKSQKCVFVGYSTQSKGYKLYDPVNGKSLISRDVVFNEEESW---NF 2340
Y V R KL+++S+K +F+GY +SK YKL+DP N K ++SRDV E + W N
Sbjct: 628 YGQVPRQHRTKLEDRSKKYIFIGYDEKSKAYKLFDPDNKKVVVSRDVHVEETKQWCWNNS 687
Query: 2341 TSVEPNSSSKIPYSSQDDVFDTPVVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEA 2520
VE +S +P ++ F D+E+
Sbjct: 688 AEVETSSDIVVPSTTTTTEFS-----------------------------------DEES 712
Query: 2521 EP---RYKSLHDIYASCSFALFV-----TEPACFKEANEVAEWKEAMLDELKAIEHNHTW 2676
EP + +SL +IY + + V +E F++A + +W+ AM +E AIE N TW
Sbjct: 713 EPQQPKMRSLREIYDTTNEVHVVCLLADSEDLSFEKAVQDEKWRTAMDEEFGAIERNKTW 772
Query: 2677 ELVTLPEGKTPIGLKWVFKIKHNADGSVKRYKARLVAKGYSQHQGIDYDETFSPVARFET 2856
EL LPEG PIG+KWV+K K NA+G V+RYKARLV KGY Q +GIDYDE F+ V R E+
Sbjct: 773 ELTNLPEGARPIGVKWVYKKKMNAEGEVERYKARLVVKGYKQKEGIDYDEVFALVTRMES 832
Query: 2857 VRILLSIAAMLNYPVYQFDVKSAFLNGELQEEVYVSQPEGFEVCGNEHKFYKLKKALYGL 3036
+R+L+S AA + + Q DVKSAFLNG L+EEVYV QP G+ G+E K +L+K+LYGL
Sbjct: 833 IRLLISFAAQRQWKILQMDVKSAFLNGVLKEEVYVEQPLGYMKRGDEKKVLRLRKSLYGL 892
Query: 3037 KQAPRAWYKRVDSYFLKNGFLRSENEPTLYVKRAGKNDFLVVVIYVDDMIYMGSNESLID 3216
KQAPRAW +R+D YF KNG+ + E LY+K++GK D +VV +YVDD+I+ GSN LI
Sbjct: 893 KQAPRAWNERIDGYFKKNGYEQCPYEHALYIKKSGK-DMMVVALYVDDLIFTGSNAKLIK 951
Query: 3217 DFKSSMQSEFEMTDLGKLQYFLGLEVKQETSGIFLSQSKYAKDLLVKFNMHNCKAVGTPM 3396
+FK M EFEMT+LG ++YFLGLEVKQ GIF+SQ +YA ++L F M +C V TPM
Sbjct: 952 EFKEIMMKEFEMTNLGLMKYFLGLEVKQSDEGIFISQERYALEILKNFKMEDCNPVSTPM 1011
Query: 3397 ITNEKLQVEDGTEAVNPSLYRSIIGGLNYLTHTRPDIMYSVNVLSRFMHKPTRLHLGAAK 3576
KL DG E + Y S++G L YLT TRPD+M SV + SRFM P+ H A K
Sbjct: 1012 EPGMKLSKFDGGERADSGRYCSLVGSLRYLTCTRPDLMLSVGITSRFMEDPSYTHWKALK 1071
Query: 3577 RVLRYVAGTVDFGLWYSKTTNGTMYGYSDSDWGGCVDNRKSTSGQVFYLGSTAVSWSSKK 3756
R+LRYV G++ GL+YSK + + GY+DSDW G VD+RKSTSG VF LG+TA +W SKK
Sbjct: 1072 RILRYVRGSLSLGLFYSKLDDYRLVGYTDSDWCGDVDDRKSTSGYVFLLGNTAFTWLSKK 1131
Query: 3757 QDVVALSSSEAEYIAVASAACQAIWLRRML 3846
Q +V LS+ E EY+ + + C A+WL +L
Sbjct: 1132 QPIVTLSTCEVEYVVASWSVCHAVWLLNLL 1161