BLASTX nr result

ID: Chrysanthemum22_contig00007236 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00007236
         (530 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH24264.1| General substrate transporter [Cynara cardunculus...    59   8e-07
ref|XP_023741395.1| organic cation/carnitine transporter 7-like ...    57   2e-06
ref|XP_021989679.1| organic cation/carnitine transporter 7-like ...    55   9e-06
ref|XP_021989678.1| organic cation/carnitine transporter 7-like ...    55   9e-06

>gb|KVH24264.1| General substrate transporter [Cynara cardunculus var. scolymus]
          Length = 490

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = -3

Query: 528 QTLPVVLFEGTILLSGLAVMLLPFETKGKELADTL 424
           QTLPV+LFE TIL+SG++V+LLPFETKGKELAD +
Sbjct: 445 QTLPVILFEVTILVSGISVVLLPFETKGKELADNI 479


>ref|XP_023741395.1| organic cation/carnitine transporter 7-like [Lactuca sativa]
 gb|PLY68009.1| hypothetical protein LSAT_5X79940 [Lactuca sativa]
          Length = 490

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -3

Query: 528 QTLPVVLFEGTILLSGLAVMLLPFETKGKELADTL 424
           QTLPV+LFE TILLSGL V+LLPFETKG+EL D +
Sbjct: 446 QTLPVILFEVTILLSGLCVVLLPFETKGRELVDVI 480


>ref|XP_021989679.1| organic cation/carnitine transporter 7-like isoform X2 [Helianthus
           annuus]
          Length = 445

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 24/35 (68%), Positives = 32/35 (91%)
 Frame = -3

Query: 528 QTLPVVLFEGTILLSGLAVMLLPFETKGKELADTL 424
           QT+PV+LFE TI LS ++V++LPFETKGKEL+DT+
Sbjct: 408 QTVPVILFEATIFLSAVSVLILPFETKGKELSDTV 442


>ref|XP_021989678.1| organic cation/carnitine transporter 7-like isoform X1 [Helianthus
           annuus]
          Length = 469

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 24/35 (68%), Positives = 32/35 (91%)
 Frame = -3

Query: 528 QTLPVVLFEGTILLSGLAVMLLPFETKGKELADTL 424
           QT+PV+LFE TI LS ++V++LPFETKGKEL+DT+
Sbjct: 432 QTVPVILFEATIFLSAVSVLILPFETKGKELSDTV 466


Top