BLASTX nr result

ID: Chrysanthemum22_contig00007179 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00007179
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTF86421.1| putative DNA helicase, UvrD/REP type, P-loop cont...    59   1e-07
gb|KVH96354.1| DNA helicase, UvrD-like, C-terminal [Cynara cardu...    57   7e-07
gb|PLY73427.1| hypothetical protein LSAT_4X107181 [Lactuca sativa]     57   1e-06

>gb|OTF86421.1| putative DNA helicase, UvrD/REP type, P-loop containing nucleoside
            triphosphate hydrolase [Helianthus annuus]
          Length = 1058

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = +3

Query: 3    QLCFM*PEDKYSEILTEVHHLRAIAVNARASYNEMRKLFEEATKLFNSIGKKELADER*R 182
            Q+CF+   D YSE L + +HLR +    RAS  E  KL ++A +LFNSIGKKELA E   
Sbjct: 975  QMCFLKAGDIYSENLAKAYHLRTLGGYGRASQLEREKLLKDAAELFNSIGKKELAAECFY 1034

Query: 183  IIEQ-QAAYYFL--C*VPFVIQFI 245
             IE  + A  FL  C   FV++ I
Sbjct: 1035 EIEDFRTAGIFLSSCLCSFVVKSI 1058


>gb|KVH96354.1| DNA helicase, UvrD-like, C-terminal [Cynara cardunculus var.
            scolymus]
          Length = 1503

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 30/57 (52%), Positives = 37/57 (64%)
 Frame = +3

Query: 3    QLCFM*PEDKYSEILTEVHHLRAIAVNARASYNEMRKLFEEATKLFNSIGKKELADE 173
            Q+CF+   DK S  L E +HLRA+A   RAS  E +KLF++A  LF  IGK ELA E
Sbjct: 1021 QVCFLKAADKNSARLAEAYHLRALADGPRASQLERKKLFKDAAMLFREIGKTELAAE 1077


>gb|PLY73427.1| hypothetical protein LSAT_4X107181 [Lactuca sativa]
          Length = 2144

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 29/57 (50%), Positives = 38/57 (66%)
 Frame = +3

Query: 3    QLCFM*PEDKYSEILTEVHHLRAIAVNARASYNEMRKLFEEATKLFNSIGKKELADE 173
            ++CFM  EDKYSE L E + L AIA    +S  E +K+F+EA +LF S+GK  LA E
Sbjct: 1020 KMCFMKAEDKYSERLAEAYQLHAIAEGINSSEIERKKVFKEAAELFQSLGKHMLAAE 1076


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