BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00007018
         (2001 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022021684.1| RNA polymerase sigma factor sigC isoform X2 ...   455   e-151
ref|XP_022021678.1| RNA polymerase sigma factor sigC isoform X1 ...   445   e-148
ref|XP_023757598.1| RNA polymerase sigma factor sigC [Lactuca sa...   413   e-138
gb|KVH89925.1| RNA polymerase sigma-70 [Cynara cardunculus var. ...   409   e-134
ref|XP_011081724.1| RNA polymerase sigma factor sigC isoform X2 ...   248   1e-80
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ...   232   5e-78
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   231   8e-78
ref|XP_021605843.1| RNA polymerase sigma factor sigC isoform X1 ...   237   3e-77
ref|XP_021605845.1| RNA polymerase sigma factor sigC isoform X2 ...   237   3e-77
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ...   241   4e-77
ref|XP_020550776.1| RNA polymerase sigma factor sigC isoform X1 ...   235   8e-77
ref|XP_019263762.1| PREDICTED: RNA polymerase sigma factor sigC ...   238   1e-76
ref|XP_016487978.1| PREDICTED: RNA polymerase sigma factor sigC-...   238   2e-76
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ...   239   5e-76
ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC ...   238   1e-75
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC ...   238   2e-75
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ...   232   1e-74
ref|XP_019070929.1| PREDICTED: RNA polymerase sigma factor sigC ...   230   3e-73
ref|XP_022872057.1| RNA polymerase sigma factor sigC [Olea europ...   222   4e-73
ref|XP_015167787.1| PREDICTED: RNA polymerase sigma factor sigC ...   229   5e-73

>ref|XP_022021684.1| RNA polymerase sigma factor sigC isoform X2 [Helianthus annuus]
 gb|OTG34632.1| putative RNA polymerase sigma-70 like domain-containing protein
            [Helianthus annuus]
          Length = 525

 Score =  455 bits (1170), Expect(2) = e-151
 Identities = 247/331 (74%), Positives = 273/331 (82%), Gaps = 1/331 (0%)
 Frame = -1

Query: 2001 LKWGLTLQPRIXXXXXXXXXXXXTCASFKVKDINYNLARVSIPMESENSYNDPSGVNPCS 1822
            LKWGL++QPR+              ASFK K +NY++ARVS+P+E ++SYND    N CS
Sbjct: 9    LKWGLSVQPRLSSTSSSLPSSTH--ASFKSKVVNYDMARVSLPVEGDSSYNDHVSGNACS 66

Query: 1821 S-ISRILDTDYSETSNVQRSVGYLLQDDILTFLTSLQANKISQYRLLLENLVVLEDTFAD 1645
            S  SRILDTDY ET++ +RSV  LLQDD LTFLTSLQA KISQYRLLLENLVVLEDTFAD
Sbjct: 67   SSTSRILDTDYMETNSFKRSVRSLLQDDKLTFLTSLQAKKISQYRLLLENLVVLEDTFAD 126

Query: 1644 SDVVSLERNILVQLEKIGALKFLRTSFSEISKYPLSVSPINEETVKKPIVHSTRKVERKS 1465
            SDVV+LE++ILVQLEKIGA KFLRTSFSEI KYPL+ +P+NEET+K PIV STRKVERKS
Sbjct: 127  SDVVTLEQDILVQLEKIGASKFLRTSFSEIPKYPLANNPVNEETIK-PIVPSTRKVERKS 185

Query: 1464 QRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKM 1285
            +RER  KKVN VCTVEF  QA N+K             N+K GR+KITRNEAELSRGVKM
Sbjct: 186  KRERTLKKVNEVCTVEFHSQAVNHKNSRRVNVSSRRLSNSKSGRIKITRNEAELSRGVKM 245

Query: 1284 VANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYL 1105
            VANLERIR MLEEETG MVSF+SWAAAAGVD+KELLENLQFGW CRDELLRSTRSLVIYL
Sbjct: 246  VANLERIRMMLEEETGPMVSFNSWAAAAGVDKKELLENLQFGWRCRDELLRSTRSLVIYL 305

Query: 1104 AKNYNGQGIAFKDLIQAGNVGVLQGAERFDR 1012
            AKNYNGQGIAFKDLIQAGNVGVLQGAERFDR
Sbjct: 306  AKNYNGQGIAFKDLIQAGNVGVLQGAERFDR 336



 Score =  112 bits (279), Expect(2) = e-151
 Identities = 55/64 (85%), Positives = 59/64 (92%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           H+REIRIPFT+SKAISKIQKARKALDKGDGRCPDD EI+KF+G SLAKIESA   LRVVG
Sbjct: 361 HSREIRIPFTLSKAISKIQKARKALDKGDGRCPDDCEIAKFSGLSLAKIESATKCLRVVG 420

Query: 782 SINQ 771
           SINQ
Sbjct: 421 SINQ 424


>ref|XP_022021678.1| RNA polymerase sigma factor sigC isoform X1 [Helianthus annuus]
          Length = 540

 Score =  445 bits (1145), Expect(2) = e-148
 Identities = 247/346 (71%), Positives = 273/346 (78%), Gaps = 16/346 (4%)
 Frame = -1

Query: 2001 LKWGLTLQPRIXXXXXXXXXXXXTCASFKVKDINYNLARVSIPMESENSYNDPSGVNPCS 1822
            LKWGL++QPR+              ASFK K +NY++ARVS+P+E ++SYND    N CS
Sbjct: 9    LKWGLSVQPRLSSTSSSLPSSTH--ASFKSKVVNYDMARVSLPVEGDSSYNDHVSGNACS 66

Query: 1821 S-ISRILDTDYSETSN---------------VQRSVGYLLQDDILTFLTSLQANKISQYR 1690
            S  SRILDTDY ET++                +RSV  LLQDD LTFLTSLQA KISQYR
Sbjct: 67   SSTSRILDTDYMETNSFKLKQIAVPASRILKTKRSVRSLLQDDKLTFLTSLQAKKISQYR 126

Query: 1689 LLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEISKYPLSVSPINEETV 1510
            LLLENLVVLEDTFADSDVV+LE++ILVQLEKIGA KFLRTSFSEI KYPL+ +P+NEET+
Sbjct: 127  LLLENLVVLEDTFADSDVVTLEQDILVQLEKIGASKFLRTSFSEIPKYPLANNPVNEETI 186

Query: 1509 KKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRV 1330
            K PIV STRKVERKS+RER  KKVN VCTVEF  QA N+K             N+K GR+
Sbjct: 187  K-PIVPSTRKVERKSKRERTLKKVNEVCTVEFHSQAVNHKNSRRVNVSSRRLSNSKSGRI 245

Query: 1329 KITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCC 1150
            KITRNEAELSRGVKMVANLERIR MLEEETG MVSF+SWAAAAGVD+KELLENLQFGW C
Sbjct: 246  KITRNEAELSRGVKMVANLERIRMMLEEETGPMVSFNSWAAAAGVDKKELLENLQFGWRC 305

Query: 1149 RDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDR 1012
            RDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDR
Sbjct: 306  RDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDR 351



 Score =  112 bits (279), Expect(2) = e-148
 Identities = 55/64 (85%), Positives = 59/64 (92%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           H+REIRIPFT+SKAISKIQKARKALDKGDGRCPDD EI+KF+G SLAKIESA   LRVVG
Sbjct: 376 HSREIRIPFTLSKAISKIQKARKALDKGDGRCPDDCEIAKFSGLSLAKIESATKCLRVVG 435

Query: 782 SINQ 771
           SINQ
Sbjct: 436 SINQ 439


>ref|XP_023757598.1| RNA polymerase sigma factor sigC [Lactuca sativa]
 gb|PLY90084.1| hypothetical protein LSAT_6X7620 [Lactuca sativa]
          Length = 525

 Score =  413 bits (1061), Expect(2) = e-138
 Identities = 226/330 (68%), Positives = 254/330 (76%)
 Frame = -1

Query: 2001 LKWGLTLQPRIXXXXXXXXXXXXTCASFKVKDINYNLARVSIPMESENSYNDPSGVNPCS 1822
            LKW L++QPR+              ASFK KDI+Y+LAR S+ MESE SY+DP     CS
Sbjct: 9    LKWVLSVQPRLSSNSPSLSSTY---ASFKSKDIHYDLARASLSMESETSYSDPLSGRTCS 65

Query: 1821 SISRILDTDYSETSNVQRSVGYLLQDDILTFLTSLQANKISQYRLLLENLVVLEDTFADS 1642
            S SRILD DYSET N   +V  LL++D LTFLTSLQANKISQYRLLLENLV LEDTFADS
Sbjct: 66   STSRILDIDYSETRN---NVKNLLREDKLTFLTSLQANKISQYRLLLENLVALEDTFADS 122

Query: 1641 DVVSLERNILVQLEKIGALKFLRTSFSEISKYPLSVSPINEETVKKPIVHSTRKVERKSQ 1462
            DVV+LE++IL QLEK+GALKFL TSFS+I K+P   + I E+TVK P+V STRK++RKSQ
Sbjct: 123  DVVTLEQDILFQLEKLGALKFLHTSFSQIPKHPFPTNSITEKTVK-PVVPSTRKIKRKSQ 181

Query: 1461 RERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMV 1282
            RER S K N VC VEF  Q    K             N+K G++K TRNEAELS+GVKMV
Sbjct: 182  RERTSTKANDVCMVEFHSQPITRKNSRRVNFSSKRSSNSKIGKLKFTRNEAELSQGVKMV 241

Query: 1281 ANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLA 1102
            A LERIR +LEEE G  VSFSSWA AAGVD+KELLENLQFGWCCRDELLRSTRSLVIYL+
Sbjct: 242  AELERIRMILEEEVGPRVSFSSWAEAAGVDKKELLENLQFGWCCRDELLRSTRSLVIYLS 301

Query: 1101 KNYNGQGIAFKDLIQAGNVGVLQGAERFDR 1012
            KNYNGQGIAFKDLIQAGNVGVLQGAERFDR
Sbjct: 302  KNYNGQGIAFKDLIQAGNVGVLQGAERFDR 331



 Score =  110 bits (274), Expect(2) = e-138
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAREIRIPFTMSKAIS+IQKARKALD GDGRCP+  EI+KFTG SLAKIESAN  LRVVG
Sbjct: 356 HAREIRIPFTMSKAISRIQKARKALDNGDGRCPNACEIAKFTGLSLAKIESANKCLRVVG 415

Query: 782 SINQ 771
           SINQ
Sbjct: 416 SINQ 419


>gb|KVH89925.1| RNA polymerase sigma-70 [Cynara cardunculus var. scolymus]
          Length = 502

 Score =  409 bits (1052), Expect(2) = e-134
 Identities = 222/315 (70%), Positives = 251/315 (79%)
 Frame = -1

Query: 2001 LKWGLTLQPRIXXXXXXXXXXXXTCASFKVKDINYNLARVSIPMESENSYNDPSGVNPCS 1822
            LKWGL++QP +              ASFK KDINY++ARVS+PMESE SYNDP   N CS
Sbjct: 9    LKWGLSIQPPLSSNSSFFPSSTY--ASFKGKDINYDMARVSLPMESETSYNDPVNGNACS 66

Query: 1821 SISRILDTDYSETSNVQRSVGYLLQDDILTFLTSLQANKISQYRLLLENLVVLEDTFADS 1642
            S SRILD DYSET N++RS G  L+ D LTFLTSLQAN ISQYRLLLENLVVLEDTFADS
Sbjct: 67   STSRILDIDYSETGNIKRSGGSSLRHDKLTFLTSLQANNISQYRLLLENLVVLEDTFADS 126

Query: 1641 DVVSLERNILVQLEKIGALKFLRTSFSEISKYPLSVSPINEETVKKPIVHSTRKVERKSQ 1462
            DVV+LER+ILVQLEK+GAL+ LRTSFSEI K+P S + INE  V KPIV STRK++RKSQ
Sbjct: 127  DVVTLERDILVQLEKLGALRLLRTSFSEIQKHPFSTNSINEGIV-KPIVPSTRKIQRKSQ 185

Query: 1461 RERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMV 1282
            RER SKK NGV  + F+ +A  +K             N+K GR+KITRNEAELS+GVKMV
Sbjct: 186  RERTSKKGNGV-PMGFRSEAIKHKNSRRVNFSSRRSSNSKAGRLKITRNEAELSQGVKMV 244

Query: 1281 ANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLA 1102
            ANLERIR MLEE+TG MVSFSSWAAAAG+D+K LLENLQFGWCCRDELL+STRSLVIY+A
Sbjct: 245  ANLERIRMMLEEDTGPMVSFSSWAAAAGIDKKVLLENLQFGWCCRDELLKSTRSLVIYIA 304

Query: 1101 KNYNGQGIAFKDLIQ 1057
            KNYNGQGIAFKDLIQ
Sbjct: 305  KNYNGQGIAFKDLIQ 319



 Score =  100 bits (248), Expect(2) = e-134
 Identities = 50/64 (78%), Positives = 56/64 (87%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           H+REIRIP T+SKAIS+IQKARKAL  GDGR PDD E++KFTG SLAKI SA+N LRVVG
Sbjct: 333 HSREIRIPLTLSKAISQIQKARKALASGDGRWPDDCEVAKFTGLSLAKIGSASNCLRVVG 392

Query: 782 SINQ 771
           SINQ
Sbjct: 393 SINQ 396


>ref|XP_011081724.1| RNA polymerase sigma factor sigC isoform X2 [Sesamum indicum]
          Length = 556

 Score =  248 bits (632), Expect(2) = 1e-80
 Identities = 154/333 (46%), Positives = 207/333 (62%), Gaps = 33/333 (9%)
 Frame = -1

Query: 1911 KDINYNLARVS---IPMESENSYNDPSGVNPCSSISRILDTDYSETSNVQRSVGY----- 1756
            +D +Y LAR+S   +      + ND S V+ CSS  ++L+  Y  T   + +VG      
Sbjct: 34   RDTSYILARLSASSVLYGETETLNDASRVHVCSSSPQLLENYYLGTRETKVAVGKGSSDG 93

Query: 1755 ---LLQ--------DDILTFLTSLQANKISQYRLLLENLVVLEDTFADSDVVSLERNILV 1609
               LL+        +D L +LTSLQA ++SQ+RLL++NL +LED F+DS+VV LER+IL 
Sbjct: 94   LSSLLEKHIETSNSEDKLAYLTSLQATQLSQFRLLMKNLDMLEDMFSDSNVVRLERDILE 153

Query: 1608 QLEKIGALKFLRTSFSEISKYPLS--VSPINEETVKKP------------IVHSTRKVER 1471
            QLE++GAL+   +  S   K   S  +S    E V++P            +V S RK  R
Sbjct: 154  QLERLGALRLFYSCLSRTLKSSTSFDLSNATTELVEEPKVNDSVDNHVGEVVRSGRKELR 213

Query: 1470 KSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGV 1291
            K +R+RM  K +G+ T E  P  T  K               KR R  I RNEAE+S GV
Sbjct: 214  KLRRKRMLDKESGITTQEL-PTVTISKQHKYASARRASRSRNKRQR--IARNEAEMSSGV 270

Query: 1290 KMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVI 1111
            K+VA LE++RT+LEEETG + S SSWA AAG+ +KEL +NL +GW CRDELLRSTRSLV+
Sbjct: 271  KLVAELEKVRTILEEETGQVASLSSWAEAAGIKKKELQQNLHYGWHCRDELLRSTRSLVL 330

Query: 1110 YLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDR 1012
            ++A+NY G G+AF+DLIQAGN+GVLQGAERFD+
Sbjct: 331  FIARNYWGLGVAFEDLIQAGNIGVLQGAERFDQ 363



 Score = 83.6 bits (205), Expect(2) = 1e-80
 Identities = 40/66 (60%), Positives = 54/66 (81%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR +RIP T+SK I+++Q+ARKAL   +G+ PDDS+I+K+TG S+AKI SA+  LRVVG
Sbjct: 388 HARGVRIPCTLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVG 447

Query: 782 SINQII 765
           SI+Q I
Sbjct: 448 SIDQKI 453


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
 emb|CBI20603.3| unnamed protein product, partial [Vitis vinifera]
          Length = 561

 Score =  232 bits (591), Expect(2) = 5e-78
 Identities = 139/339 (41%), Positives = 195/339 (57%), Gaps = 35/339 (10%)
 Frame = -1

Query: 1926 ASFKVKDINYNLARVSIPM----ESENSYNDPSGVNPCSSIS-RILDTDYSETSNVQRSV 1762
            +S + K+ +++  R S P     + E+ Y DP     CSS + +  + DYS    ++  +
Sbjct: 30   SSVQGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKI 89

Query: 1761 GYL---------------LQDDILTFLTSLQANKISQYRLLLENLVVLEDTFADSDVVSL 1627
            G                 + +DI   +  LQA+K SQ+ LLLENL +LE+ FADS++V L
Sbjct: 90   GKCSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRL 149

Query: 1626 ERNILVQLEKIGALKFLRTSFSEISKYPLSVSPINEET---------------VKKPIVH 1492
            ER+I+VQL ++GALK  +   S   K   S    +  T               + K +V 
Sbjct: 150  ERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVR 209

Query: 1491 STRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNE 1312
            S +K ERKS+RER  +K + +       +                  N++R R+   +NE
Sbjct: 210  SGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNE 269

Query: 1311 AELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLR 1132
            AE+S+GVK+VANLERIR  LEEE G + S S+WA AAGVD+K L + LQFGW CRDELLR
Sbjct: 270  AEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLR 329

Query: 1131 STRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFD 1015
            ST SLV+Y+A+NY G G+AF+D++QAGN+GVLQGAERFD
Sbjct: 330  STHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFD 368



 Score = 90.9 bits (224), Expect(2) = 5e-78
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR ++IPFT+++AI +IQKARKAL K  GR PDD+EI+KFTG SLAKI SA N LRVVG
Sbjct: 394 HARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVG 453

Query: 782 SINQIIQ 762
           S +Q  Q
Sbjct: 454 STDQSFQ 460


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  231 bits (589), Expect(2) = 8e-78
 Identities = 138/334 (41%), Positives = 192/334 (57%), Gaps = 35/334 (10%)
 Frame = -1

Query: 1911 KDINYNLARVSIPM----ESENSYNDPSGVNPCSSIS-RILDTDYSETSNVQRSVGYL-- 1753
            K+ +++  R S P     + E+ Y DP     CSS + +  + DYS    ++  +G    
Sbjct: 85   KEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKCSH 144

Query: 1752 -------------LQDDILTFLTSLQANKISQYRLLLENLVVLEDTFADSDVVSLERNIL 1612
                         + +DI   +  LQA+K SQ+ LLLENL +LE+ FADS++V LER+I+
Sbjct: 145  GDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLERDIM 204

Query: 1611 VQLEKIGALKFLRTSFSEISKYPLSVSPINEET---------------VKKPIVHSTRKV 1477
            VQL ++GALK  +   S   K   S    +  T               + K +V S +K 
Sbjct: 205  VQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKE 264

Query: 1476 ERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSR 1297
            ERKS+RER  +K + +       +                  N++R R+   +NEAE+S+
Sbjct: 265  ERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSK 324

Query: 1296 GVKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSL 1117
            GVK+VANLERIR  LEEE G + S S+WA AAGVD+K L + LQFGW CRDELLRST SL
Sbjct: 325  GVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSL 384

Query: 1116 VIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFD 1015
            V+Y+A+NY G G+AF+D++QAGN+GVLQGAERFD
Sbjct: 385  VLYIARNYRGMGVAFEDILQAGNLGVLQGAERFD 418



 Score = 90.9 bits (224), Expect(2) = 8e-78
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR ++IPFT+++AI +IQKARKAL K  GR PDD+EI+KFTG SLAKI SA N LRVVG
Sbjct: 444 HARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVG 503

Query: 782 SINQIIQ 762
           S +Q  Q
Sbjct: 504 STDQSFQ 510


>ref|XP_021605843.1| RNA polymerase sigma factor sigC isoform X1 [Manihot esculenta]
 gb|OAY54212.1| hypothetical protein MANES_03G057200 [Manihot esculenta]
          Length = 540

 Score =  237 bits (604), Expect(2) = 3e-77
 Identities = 141/318 (44%), Positives = 200/318 (62%), Gaps = 14/318 (4%)
 Frame = -1

Query: 1926 ASFKVKDINYNLARVS----IPMESENSYNDPSGVNPCSSISRILDTDYSETSNVQRSVG 1759
            +S K ++ ++NL R+S    I  E +  Y DP     CS   +IL+ ++++    +   G
Sbjct: 30   SSVKGREGSFNLTRLSFLSVISEEGDILYRDPLKAFACSPGLQILENEHTQVEGSKMIFG 89

Query: 1758 ---YLLQDDILTFLTSLQANKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGA 1588
               +   D ++   TS   ++ S++ LLLENL +LE++FADSDV+ LER+IL+ L ++GA
Sbjct: 90   KGSHNTIDILVPPSTSSSKDRHSRFSLLLENLNILEESFADSDVLKLERDILMHLGRLGA 149

Query: 1587 LKF----LRTSFSEISKYPLS---VSPINEETVKKPIVHSTRKVERKSQRERMSKKVNGV 1429
            LK     LR +FS++    +    ++ I+   V + IV S +K ERKS+R+R S K N V
Sbjct: 150  LKLFNTCLRRTFSDVPTETVGECEINGISNNHVNEVIVRSAKKEERKSRRKRASSKTNLV 209

Query: 1428 CTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLE 1249
             ++    ++                 N++  R+ I RNEAE+SRGVKMVA LE+IRT LE
Sbjct: 210  ASLSLPSKSIQSGPGKPTYSSAKKASNSQSRRLVIARNEAEMSRGVKMVAELEKIRTTLE 269

Query: 1248 EETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFK 1069
            EE G +VS+S WA AAG+D KEL + L+FGW CRDEL+RSTR LV+Y A+NY G GIA +
Sbjct: 270  EEAGRVVSWSCWAEAAGLDMKELQQRLRFGWHCRDELIRSTRPLVLYFARNYRGMGIALE 329

Query: 1068 DLIQAGNVGVLQGAERFD 1015
            DL+QAG VGVLQGAERFD
Sbjct: 330  DLLQAGTVGVLQGAERFD 347



 Score = 83.2 bits (204), Expect(2) = 3e-77
 Identities = 43/64 (67%), Positives = 54/64 (84%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR I+IP T+S+AI++IQKARKAL+   G+  DD+EI+KFTG SLAKIESA+  LRVVG
Sbjct: 373 HARGIQIPCTLSQAINQIQKARKALNTRYGKYADDTEIAKFTGLSLAKIESASKCLRVVG 432

Query: 782 SINQ 771
           SI+Q
Sbjct: 433 SIDQ 436


>ref|XP_021605845.1| RNA polymerase sigma factor sigC isoform X2 [Manihot esculenta]
          Length = 539

 Score =  237 bits (604), Expect(2) = 3e-77
 Identities = 141/318 (44%), Positives = 200/318 (62%), Gaps = 14/318 (4%)
 Frame = -1

Query: 1926 ASFKVKDINYNLARVS----IPMESENSYNDPSGVNPCSSISRILDTDYSETSNVQRSVG 1759
            +S K ++ ++NL R+S    I  E +  Y DP     CS   +IL+ ++++    +   G
Sbjct: 29   SSVKGREGSFNLTRLSFLSVISEEGDILYRDPLKAFACSPGLQILENEHTQVEGSKMIFG 88

Query: 1758 ---YLLQDDILTFLTSLQANKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGA 1588
               +   D ++   TS   ++ S++ LLLENL +LE++FADSDV+ LER+IL+ L ++GA
Sbjct: 89   KGSHNTIDILVPPSTSSSKDRHSRFSLLLENLNILEESFADSDVLKLERDILMHLGRLGA 148

Query: 1587 LKF----LRTSFSEISKYPLS---VSPINEETVKKPIVHSTRKVERKSQRERMSKKVNGV 1429
            LK     LR +FS++    +    ++ I+   V + IV S +K ERKS+R+R S K N V
Sbjct: 149  LKLFNTCLRRTFSDVPTETVGECEINGISNNHVNEVIVRSAKKEERKSRRKRASSKTNLV 208

Query: 1428 CTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLE 1249
             ++    ++                 N++  R+ I RNEAE+SRGVKMVA LE+IRT LE
Sbjct: 209  ASLSLPSKSIQSGPGKPTYSSAKKASNSQSRRLVIARNEAEMSRGVKMVAELEKIRTTLE 268

Query: 1248 EETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFK 1069
            EE G +VS+S WA AAG+D KEL + L+FGW CRDEL+RSTR LV+Y A+NY G GIA +
Sbjct: 269  EEAGRVVSWSCWAEAAGLDMKELQQRLRFGWHCRDELIRSTRPLVLYFARNYRGMGIALE 328

Query: 1068 DLIQAGNVGVLQGAERFD 1015
            DL+QAG VGVLQGAERFD
Sbjct: 329  DLLQAGTVGVLQGAERFD 346



 Score = 83.2 bits (204), Expect(2) = 3e-77
 Identities = 43/64 (67%), Positives = 54/64 (84%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR I+IP T+S+AI++IQKARKAL+   G+  DD+EI+KFTG SLAKIESA+  LRVVG
Sbjct: 372 HARGIQIPCTLSQAINQIQKARKALNTRYGKYADDTEIAKFTGLSLAKIESASKCLRVVG 431

Query: 782 SINQ 771
           SI+Q
Sbjct: 432 SIDQ 435


>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC [Nicotiana
            tomentosiformis]
          Length = 572

 Score =  241 bits (614), Expect(2) = 4e-77
 Identities = 149/361 (41%), Positives = 207/361 (57%), Gaps = 32/361 (8%)
 Frame = -1

Query: 2001 LKWGLTLQPRIXXXXXXXXXXXXTCASFKVKDINYNLARVSIPMESEN---SYNDPSGVN 1831
            LKWG ++QP                 SFK K+  Y+ AR   P  +E+   S++DP  V 
Sbjct: 24   LKWGFSVQPPFSSNSSSWPSSH----SFKGKEALYDPARSLKPFINEDCEPSHSDPFRVR 79

Query: 1830 PCSSISRILDTDYSETSNVQRSVGYLLQDDILTFL--------------TSLQANKISQY 1693
             C S  ++  +D S T+ ++  +G     +I   +              T L   +   +
Sbjct: 80   TCLSDPQLWTSDTSVTTEIKTRIGRGSPTNIYGDIGSPKNVISLDGEKPTYLNTTRALHF 139

Query: 1692 RLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRT---------SFSEISKYPL 1540
             LL++NL +LE+ FADS+V  LER+I+VQL+K+GAL+F  T         +F E+   P 
Sbjct: 140  SLLMKNLDLLENMFADSEVSRLERDIMVQLDKLGALEFFHTCLSRTNHCSTFPEVLDVPR 199

Query: 1539 SVSPINEET------VKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXX 1378
             +    E+       + K +V S +K ERKS+R R S+  N + TV+   +         
Sbjct: 200  ELIEEIEKDGLVGNGIDKVVVRSKKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQP 259

Query: 1377 XXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAG 1198
                      ++  R KI +NEAE+SRGVK+VA LERIR++LEEETG + SFSSWA AAG
Sbjct: 260  KFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAG 319

Query: 1197 VDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERF 1018
            V++KEL + L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+GVLQGA RF
Sbjct: 320  VEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRF 379

Query: 1017 D 1015
            D
Sbjct: 380  D 380



 Score = 79.0 bits (193), Expect(2) = 4e-77
 Identities = 39/64 (60%), Positives = 49/64 (76%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR IRIPFT+ KAI++I KARKAL +  G+ P D EI+K+TG S A+I  A+  LRVVG
Sbjct: 406 HARGIRIPFTICKAINQIHKARKALSRSHGKFPGDDEIAKYTGLSTARIAMASKCLRVVG 465

Query: 782 SINQ 771
           SI+Q
Sbjct: 466 SIDQ 469


>ref|XP_020550776.1| RNA polymerase sigma factor sigC isoform X1 [Sesamum indicum]
          Length = 578

 Score =  235 bits (599), Expect(2) = 8e-77
 Identities = 154/355 (43%), Positives = 207/355 (58%), Gaps = 55/355 (15%)
 Frame = -1

Query: 1911 KDINYNLARVS---IPMESENSYNDPSGVNPCSSISRILDTDYSETSNVQRSVGY----- 1756
            +D +Y LAR+S   +      + ND S V+ CSS  ++L+  Y  T   + +VG      
Sbjct: 34   RDTSYILARLSASSVLYGETETLNDASRVHVCSSSPQLLENYYLGTRETKVAVGKGSSDG 93

Query: 1755 ---LLQ--------DDILTFLTSLQANKISQYRLLLENLVVLEDTFADSDVVSLERNILV 1609
               LL+        +D L +LTSLQA ++SQ+RLL++NL +LED F+DS+VV LER+IL 
Sbjct: 94   LSSLLEKHIETSNSEDKLAYLTSLQATQLSQFRLLMKNLDMLEDMFSDSNVVRLERDILE 153

Query: 1608 QLEKIGALKFLRTSFSEISKYPLS--VSPINEETVKKP------------IVHSTRKVER 1471
            QLE++GAL+   +  S   K   S  +S    E V++P            +V S RK  R
Sbjct: 154  QLERLGALRLFYSCLSRTLKSSTSFDLSNATTELVEEPKVNDSVDNHVGEVVRSGRKELR 213

Query: 1470 KSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGV 1291
            K +R+RM  K +G+ T E  P  T  K               KR R  I RNEAE+S GV
Sbjct: 214  KLRRKRMLDKESGITTQEL-PTVTISKQHKYASARRASRSRNKRQR--IARNEAEMSSGV 270

Query: 1290 KMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVI 1111
            K+VA LE++RT+LEEETG + S SSWA AAG+ +KEL +NL +GW CRDELLRSTRSLV+
Sbjct: 271  KLVAELEKVRTILEEETGQVASLSSWAEAAGIKKKELQQNLHYGWHCRDELLRSTRSLVL 330

Query: 1110 YLAKNYNGQGIAFKDLIQ----------------------AGNVGVLQGAERFDR 1012
            ++A+NY G G+AF+DLIQ                      AGN+GVLQGAERFD+
Sbjct: 331  FIARNYWGLGVAFEDLIQAEYCSHKKPKLEFVLFIEHSWNAGNIGVLQGAERFDQ 385



 Score = 83.6 bits (205), Expect(2) = 8e-77
 Identities = 40/66 (60%), Positives = 54/66 (81%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR +RIP T+SK I+++Q+ARKAL   +G+ PDDS+I+K+TG S+AKI SA+  LRVVG
Sbjct: 410 HARGVRIPCTLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVG 469

Query: 782 SINQII 765
           SI+Q I
Sbjct: 470 SIDQKI 475


>ref|XP_019263762.1| PREDICTED: RNA polymerase sigma factor sigC [Nicotiana attenuata]
 gb|OIT36910.1| rna polymerase sigma factor sigc [Nicotiana attenuata]
          Length = 555

 Score =  238 bits (608), Expect(2) = 1e-76
 Identities = 149/360 (41%), Positives = 204/360 (56%), Gaps = 31/360 (8%)
 Frame = -1

Query: 2001 LKWGLTLQPRIXXXXXXXXXXXXTCASFKVKDINYNLARVSIPM---ESENSYNDPSGVN 1831
            LKWG ++QP                 SFK K+  Y+ AR   P    + E S++DP  V 
Sbjct: 7    LKWGFSVQPPFSPNSASAWPSSH---SFKGKEALYDPARSLKPFINGDCEPSHSDPFRVR 63

Query: 1830 PCSSISRILDTDYSETSNVQRSVGYLLQDDILTFLTS--------------LQANKISQY 1693
             C S  ++  +D S T+ ++  +G     +I   + S              L   +   +
Sbjct: 64   TCLSDPQLWTSDISVTTEIKTRIGRGSPSNIYGDIGSDKIGISPDGEKPLYLNTTRAPHF 123

Query: 1692 RLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKF--------LRTSFSEISKYPLS 1537
             LL++N+ +LE+ FADS++  LE NILVQLEK+GAL+F        L ++F E+   P  
Sbjct: 124  SLLMKNIDLLENMFADSEMSRLENNILVQLEKLGALEFFHSRLSRTLHSTFPEVLDVPRD 183

Query: 1536 VSPINEET------VKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXX 1375
            +    E+       + K +V S +K ERKS+R R S   N + TV    +          
Sbjct: 184  LIEEIEKDDLVGNGINKVVVRSRKKQERKSRRNRASGIANDIITVHPHTKNIQEDMQQPK 243

Query: 1374 XXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAGV 1195
                     ++  R KI +NEAE+SRGVK+VA LERIR++LEEETG + SFSSWA AAGV
Sbjct: 244  FYSGKRTHASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGV 303

Query: 1194 DRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFD 1015
            ++KEL  +L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+GVLQGA RFD
Sbjct: 304  EQKELQHHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFD 363



 Score = 79.3 bits (194), Expect(2) = 1e-76
 Identities = 39/64 (60%), Positives = 50/64 (78%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR IRIPFT+ KAI++I KARKAL +  G+ P D+EI+K+TG S A+I  A+  LRVVG
Sbjct: 389 HARGIRIPFTICKAINQIHKARKALSRSHGKFPGDNEIAKYTGLSTARIAMASKCLRVVG 448

Query: 782 SINQ 771
           SI+Q
Sbjct: 449 SIDQ 452


>ref|XP_016487978.1| PREDICTED: RNA polymerase sigma factor sigC-like [Nicotiana tabacum]
          Length = 572

 Score =  238 bits (608), Expect(2) = 2e-76
 Identities = 148/361 (40%), Positives = 206/361 (57%), Gaps = 32/361 (8%)
 Frame = -1

Query: 2001 LKWGLTLQPRIXXXXXXXXXXXXTCASFKVKDINYNLARVSIPMESEN---SYNDPSGVN 1831
            LKWG ++QP                 S K K+  Y+ AR   P  +E+   S++DP  V 
Sbjct: 24   LKWGFSVQPPFSSNSSSWPSSH----SLKGKEALYDPARSLKPFINEDCEPSHSDPFRVR 79

Query: 1830 PCSSISRILDTDYSETSNVQRSVGYLLQDDILTFL--------------TSLQANKISQY 1693
             C S  ++  +D S T+ ++  +G     +I   +              T L   +   +
Sbjct: 80   TCLSDPQLWTSDTSVTTEIKTRIGRGSPTNIYGDIGSPKNGITLDGEKPTYLNTTRALHF 139

Query: 1692 RLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRT---------SFSEISKYPL 1540
             LL++NL +LE+ FADS+V  LER+I+VQL+K+GAL+F  T         +F E+   P 
Sbjct: 140  SLLMKNLDLLENMFADSEVSRLERDIMVQLDKLGALEFFHTCLSRTNHCSTFPEVLDVPR 199

Query: 1539 SVSPINEET------VKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXX 1378
             +    E+       + K +V S +K ERKS+R R S+  N + TV+   +         
Sbjct: 200  ELIEEIEKDGLVGNGIDKVVVRSKKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQP 259

Query: 1377 XXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAG 1198
                      ++  R KI +NEAE+SRGVK+VA LERIR++LEEETG + SFSSWA AAG
Sbjct: 260  KFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAG 319

Query: 1197 VDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERF 1018
            V++KEL + L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+GVLQGA RF
Sbjct: 320  VEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRF 379

Query: 1017 D 1015
            D
Sbjct: 380  D 380



 Score = 79.0 bits (193), Expect(2) = 2e-76
 Identities = 39/64 (60%), Positives = 49/64 (76%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR IRIPFT+ KAI++I KARKAL +  G+ P D EI+K+TG S A+I  A+  LRVVG
Sbjct: 406 HARGIRIPFTICKAINQIHKARKALSRSHGKFPGDDEIAKYTGLSTARIAMASKCLRVVG 465

Query: 782 SINQ 771
           SI+Q
Sbjct: 466 SIDQ 469


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Solanum
            lycopersicum]
          Length = 551

 Score =  239 bits (611), Expect(2) = 5e-76
 Identities = 152/361 (42%), Positives = 209/361 (57%), Gaps = 32/361 (8%)
 Frame = -1

Query: 2001 LKWGLTLQPRIXXXXXXXXXXXXTCASFKVKDINYNLARVSIPM---ESENSYNDPSGVN 1831
            LKWG +LQP                 SFK ++  Y+ AR   P    + E S++DP  V 
Sbjct: 7    LKWGFSLQPPFSSNSSSWPSSH----SFKGRETLYDPARSLKPFINGDCEPSHSDPFRVQ 62

Query: 1830 PCSSISRILDTDYSET------------SNVQRSVG-YLLQDDILTFLTSLQANKISQYR 1690
             C S  ++  +D S T            SNV   +G Y +  +  T+L +    K   + 
Sbjct: 63   TCLSDPQLWTSDASVTTETKTRNGRGSPSNVYGDIGSYKIDGEKPTYLNT---TKSLHFS 119

Query: 1689 LLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEI---SKYPLSVSPINE 1519
            LL++NL +LE+ FADS++  LER+ILVQLEK+GAL+F  T  S     S +P  V  +  
Sbjct: 120  LLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSSFP-KVLDVPR 178

Query: 1518 ETVK-------------KPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXX 1378
            E +K             K +V S +K ER S+R+R S+  N + TV+   +         
Sbjct: 179  ELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNIQEDLQQL 238

Query: 1377 XXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAG 1198
                      ++  R KI +NEAE+S+GVK+VA LERIR++LEEETG + +FSSWA AAG
Sbjct: 239  KFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSSWAKAAG 298

Query: 1197 VDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERF 1018
            +++KEL ++L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+GVLQGA RF
Sbjct: 299  IEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRF 358

Query: 1017 D 1015
            D
Sbjct: 359  D 359



 Score = 76.3 bits (186), Expect(2) = 5e-76
 Identities = 37/64 (57%), Positives = 47/64 (73%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR +RIPFT+ K I++I KARK L +  G+ P D EI+KFTG S A+I  A+  LRVVG
Sbjct: 385 HARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVG 444

Query: 782 SINQ 771
           SI+Q
Sbjct: 445 SIDQ 448


>ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum pennellii]
          Length = 551

 Score =  238 bits (608), Expect(2) = 1e-75
 Identities = 151/361 (41%), Positives = 209/361 (57%), Gaps = 32/361 (8%)
 Frame = -1

Query: 2001 LKWGLTLQPRIXXXXXXXXXXXXTCASFKVKDINYNLARVSIPM---ESENSYNDPSGVN 1831
            LKWG +LQP                 SFK ++  Y+ AR   P    + E S++DP  V 
Sbjct: 7    LKWGFSLQPPFSSNSSSWPSSH----SFKGRETLYDPARSLKPFINGDCEPSHSDPFRVQ 62

Query: 1830 PCSSISRILDTDYSET------------SNVQRSVG-YLLQDDILTFLTSLQANKISQYR 1690
             C S  ++  +D S T            SNV   +G Y +  +  T++ +    K   + 
Sbjct: 63   TCLSDPQLWTSDASVTIETKTRNGRGSPSNVYGDIGSYKIDGEKPTYINT---TKSLHFS 119

Query: 1689 LLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEI---SKYPLSVSPINE 1519
            LL++NL +LE+ FADS++  LER+ILVQLEK+GAL+F  T  S     S +P  V  +  
Sbjct: 120  LLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFP-KVLDVPR 178

Query: 1518 ETVK-------------KPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXX 1378
            E +K             K +V S +K ER S+R+R S+  N + TV+   +         
Sbjct: 179  ELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNIQEDLQQP 238

Query: 1377 XXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAG 1198
                      ++  R KI +NEAE+S+GVK+VA LERIR++LEEETG + +FSSWA AAG
Sbjct: 239  KFYSGKRTHASRNKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGRVATFSSWAEAAG 298

Query: 1197 VDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERF 1018
            +++KEL ++L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+GVLQGA RF
Sbjct: 299  IEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRF 358

Query: 1017 D 1015
            D
Sbjct: 359  D 359



 Score = 76.3 bits (186), Expect(2) = 1e-75
 Identities = 37/64 (57%), Positives = 47/64 (73%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR +RIPFT+ K I++I KARK L +  G+ P D EI+KFTG S A+I  A+  LRVVG
Sbjct: 385 HARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVG 444

Query: 782 SINQ 771
           SI+Q
Sbjct: 445 SIDQ 448


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Solanum
            tuberosum]
          Length = 555

 Score =  238 bits (607), Expect(2) = 2e-75
 Identities = 149/362 (41%), Positives = 205/362 (56%), Gaps = 33/362 (9%)
 Frame = -1

Query: 2001 LKWGLTLQPRIXXXXXXXXXXXXTCASFKVKDINYNLARVSIPM---ESENSYNDPSGVN 1831
            LKWG ++QP                 SFK ++  Y+ AR   P    + E S++DP  V 
Sbjct: 7    LKWGFSVQPPFSSNSSSWPSSH----SFKGREALYDPARSLKPFITGDCEPSHSDPFRVQ 62

Query: 1830 PCSSISRILDTDYSETSNVQRSVGYLLQDDILTFL--------------TSLQANKISQY 1693
             C S  ++  +D S T+ ++   G     ++   +              T L   K   +
Sbjct: 63   TCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDGEKPTYLNTTKSLHF 122

Query: 1692 RLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEI---SKYPLSVSPIN 1522
             LL++NL +LE+ FADS++  LER+ILVQLEK+GAL+F  T  S     S +P  V  + 
Sbjct: 123  SLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFP-KVLDVP 181

Query: 1521 EETVK-------------KPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXX 1381
             E +K             K +V S +K ERKS+R R S+  N + TV+   +        
Sbjct: 182  RELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQ 241

Query: 1380 XXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAA 1201
                       ++  R KI +NEAE+SRGVK+VA LERIR++LEEETG + +FSSWA AA
Sbjct: 242  PKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEAA 301

Query: 1200 GVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAER 1021
            G+++KEL + L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+GVLQGA R
Sbjct: 302  GIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVR 361

Query: 1020 FD 1015
            FD
Sbjct: 362  FD 363



 Score = 76.3 bits (186), Expect(2) = 2e-75
 Identities = 37/64 (57%), Positives = 47/64 (73%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR +RIPFT+ K I++I KARK L +  G+ P D EI+KFTG S A+I  A+  LRVVG
Sbjct: 389 HARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVG 448

Query: 782 SINQ 771
           SI+Q
Sbjct: 449 SIDQ 452


>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
            sylvestris]
 ref|XP_016482950.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
            [Nicotiana tabacum]
          Length = 554

 Score =  232 bits (591), Expect(2) = 1e-74
 Identities = 147/360 (40%), Positives = 202/360 (56%), Gaps = 31/360 (8%)
 Frame = -1

Query: 2001 LKWGLTLQPRIXXXXXXXXXXXXTCASFKVKDINYNLARVSIPM---ESENSYNDPSGVN 1831
            LKWG ++QP                 SFK K+  Y+ AR   P    + E S++DP  V 
Sbjct: 7    LKWGFSVQPPFSSNSSAWPSSH----SFKGKEALYDPARSLKPFINGDCEPSHSDPFRVR 62

Query: 1830 PCSSISRILDTDYSETSNVQRSVGYLLQDDILTFLTS--------------LQANKISQY 1693
             C S  ++  +D S T+ ++  +G     +I   + S              L   +   +
Sbjct: 63   TCLSDPQLWTSDISVTTEIKTRIGRGSPSNIYGDIGSDKTGISPDGEKPSYLSTTRAPHF 122

Query: 1692 RLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFS--------EISKYPLS 1537
             LL++N+ +LE+ FADS++  LE +ILVQLEK+GAL+F  +  S        E+   P  
Sbjct: 123  SLLMKNIDLLENMFADSEMSRLENDILVQLEKLGALEFFHSRLSRTLHSTSPEVLDVPRE 182

Query: 1536 -VSPINEET-----VKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXX 1375
             V  I ++      + K +V S +K ER S+R R S   N + TV    +          
Sbjct: 183  LVEEIEKDDLVGNGIDKVVVRSRKKQERNSRRNRASGIANDIITVHPHTKNIQEDMQQPK 242

Query: 1374 XXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAGV 1195
                     ++  R KI +NEAE+SRGVK+VA LERIR++LEEETG + SFSSWA AAGV
Sbjct: 243  FYSGKRTHASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGV 302

Query: 1194 DRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFD 1015
            ++KEL  +L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+GVLQGA RFD
Sbjct: 303  EQKELQHHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFD 362



 Score = 79.3 bits (194), Expect(2) = 1e-74
 Identities = 39/64 (60%), Positives = 50/64 (78%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR IRIPFT+ KAI++I KARKAL +  G+ P D+EI+K+TG S A+I  A+  LRVVG
Sbjct: 388 HARGIRIPFTICKAINQIHKARKALSRSHGKFPGDNEIAKYTGLSTARIAMASKCLRVVG 447

Query: 782 SINQ 771
           SI+Q
Sbjct: 448 SIDQ 451


>ref|XP_019070929.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Solanum
            lycopersicum]
          Length = 529

 Score =  230 bits (587), Expect(2) = 3e-73
 Identities = 143/336 (42%), Positives = 200/336 (59%), Gaps = 32/336 (9%)
 Frame = -1

Query: 1926 ASFKVKDINYNLARVSIPM---ESENSYNDPSGVNPCSSISRILDTDYSET--------- 1783
            +  K ++  Y+ AR   P    + E S++DP  V  C S  ++  +D S T         
Sbjct: 6    SKIKGRETLYDPARSLKPFINGDCEPSHSDPFRVQTCLSDPQLWTSDASVTTETKTRNGR 65

Query: 1782 ---SNVQRSVG-YLLQDDILTFLTSLQANKISQYRLLLENLVVLEDTFADSDVVSLERNI 1615
               SNV   +G Y +  +  T+L +    K   + LL++NL +LE+ FADS++  LER+I
Sbjct: 66   GSPSNVYGDIGSYKIDGEKPTYLNT---TKSLHFSLLMKNLDLLENMFADSEMSRLERDI 122

Query: 1614 LVQLEKIGALKFLRTSFSEI---SKYPLSVSPINEETVK-------------KPIVHSTR 1483
            LVQLEK+GAL+F  T  S     S +P  V  +  E +K             K +V S +
Sbjct: 123  LVQLEKLGALEFFHTCLSRTHHSSSFP-KVLDVPRELIKEVEKDDLVGNAMDKVVVRSRK 181

Query: 1482 KVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAEL 1303
            K ER S+R+R S+  N + TV+   +                   ++  R KI +NEAE+
Sbjct: 182  KQERMSRRKRASRNANDIITVQPHTKNIQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEM 241

Query: 1302 SRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTR 1123
            S+GVK+VA LERIR++LEEETG + +FSSWA AAG+++KEL ++L FGW CRDELL+STR
Sbjct: 242  SKGVKLVAQLERIRSILEEETGQVATFSSWAKAAGIEQKELQQHLHFGWYCRDELLKSTR 301

Query: 1122 SLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFD 1015
            SLV+YLA+NY G G+AF+DLIQAGN+GVLQGA RFD
Sbjct: 302  SLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFD 337



 Score = 76.3 bits (186), Expect(2) = 3e-73
 Identities = 37/64 (57%), Positives = 47/64 (73%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR +RIPFT+ K I++I KARK L +  G+ P D EI+KFTG S A+I  A+  LRVVG
Sbjct: 363 HARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVG 422

Query: 782 SINQ 771
           SI+Q
Sbjct: 423 SIDQ 426


>ref|XP_022872057.1| RNA polymerase sigma factor sigC [Olea europaea var. sylvestris]
          Length = 558

 Score =  222 bits (566), Expect(2) = 4e-73
 Identities = 134/310 (43%), Positives = 185/310 (59%), Gaps = 31/310 (10%)
 Frame = -1

Query: 1848 DPSGVNPCSSISRILDTDYSETSNVQRSVG-------YLLQDDI---------LTFLTSL 1717
            DP G   C +  +IL+ +Y     ++   G       Y L DD          L FL SL
Sbjct: 60   DPLGPRTCLTSPQILEDNYFGNKEIKMDPGKQSRNGLYSLSDDNIQMSAEEDKLPFLISL 119

Query: 1716 QANKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEISK---- 1549
            QA + S + LL++NL  LE  F+DSDV++LER+IL QL+++GAL+   T  S   K    
Sbjct: 120  QATEASHFSLLMKNLDKLEKMFSDSDVITLERDILQQLKRLGALRLFHTCLSRALKSSTL 179

Query: 1548 YPLSVSP---INEETVKKPI--------VHSTRKVERKSQRERMSKKVNGVCTVEFQPQA 1402
              LS  P   + E  + +P+        V S +K +R+ +R+R  +K N    +EF  + 
Sbjct: 180  LDLSDGPMELVEETRINEPVTDHEGKVVVQSGKKEQRRLRRKRALEKGNDSSMLEFSSKT 239

Query: 1401 TNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSF 1222
                              T++ ++KIT+NEAE+S GVK+VA+LE++RTMLEEETG + S 
Sbjct: 240  I----PGNKISSRRRHLITRKKKLKITKNEAEMSSGVKLVADLEKVRTMLEEETGQVGSL 295

Query: 1221 SSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVG 1042
            +SWA AA V++K L + L  GW CRDELLRSTRSLV+++AKNY G G+AF+DLIQAGN G
Sbjct: 296  NSWAEAARVEKKTLQQRLHHGWQCRDELLRSTRSLVVFIAKNYRGLGVAFEDLIQAGNFG 355

Query: 1041 VLQGAERFDR 1012
            VLQGAERFD+
Sbjct: 356  VLQGAERFDQ 365



 Score = 84.0 bits (206), Expect(2) = 4e-73
 Identities = 40/64 (62%), Positives = 52/64 (81%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR +RIPF +SK I+++QKARK+L    G+ PDD+EI+KFTG S+AKI SA+  LRVVG
Sbjct: 390 HARGVRIPFMLSKVINQVQKARKSLRSSHGKHPDDTEIAKFTGLSIAKITSASKCLRVVG 449

Query: 782 SINQ 771
           SI+Q
Sbjct: 450 SIDQ 453


>ref|XP_015167787.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Solanum
            tuberosum]
          Length = 560

 Score =  229 bits (585), Expect(2) = 5e-73
 Identities = 141/334 (42%), Positives = 195/334 (58%), Gaps = 33/334 (9%)
 Frame = -1

Query: 1917 KVKDINYNLARVSIPM---ESENSYNDPSGVNPCSSISRILDTDYSETSNVQRSVGYLLQ 1747
            K ++  Y+ AR   P    + E S++DP  V  C S  ++  +D S T+ ++   G    
Sbjct: 36   KGREALYDPARSLKPFITGDCEPSHSDPFRVQTCLSDPQLWTSDTSVTTEIKTRNGRGSP 95

Query: 1746 DDILTFL--------------TSLQANKISQYRLLLENLVVLEDTFADSDVVSLERNILV 1609
             ++   +              T L   K   + LL++NL +LE+ FADS++  LER+ILV
Sbjct: 96   SNVYGDIGSHKIGISPDGEKPTYLNTTKSLHFSLLMKNLDLLENMFADSEMSRLERDILV 155

Query: 1608 QLEKIGALKFLRTSFSEI---SKYPLSVSPINEETVK-------------KPIVHSTRKV 1477
            QLEK+GAL+F  T  S     S +P  V  +  E +K             K +V S +K 
Sbjct: 156  QLEKLGALEFFHTCLSRTHHSSTFP-KVLDVPRELIKEVEKDDLVGNAIDKVVVRSRKKQ 214

Query: 1476 ERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSR 1297
            ERKS+R R S+  N + TV+   +                   ++  R KI +NEAE+SR
Sbjct: 215  ERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRTQASRNKRQKIAKNEAEMSR 274

Query: 1296 GVKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSL 1117
            GVK+VA LERIR++LEEETG + +FSSWA AAG+++KEL + L FGW CRDELL+STRSL
Sbjct: 275  GVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQRLHFGWYCRDELLKSTRSL 334

Query: 1116 VIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFD 1015
            V+YLA+NY G G+AF+DLIQAGN+GVLQGA RFD
Sbjct: 335  VLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFD 368



 Score = 76.3 bits (186), Expect(2) = 5e-73
 Identities = 37/64 (57%), Positives = 47/64 (73%)
 Frame = -2

Query: 962 HAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVG 783
           HAR +RIPFT+ K I++I KARK L +  G+ P D EI+KFTG S A+I  A+  LRVVG
Sbjct: 394 HARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVG 453

Query: 782 SINQ 771
           SI+Q
Sbjct: 454 SIDQ 457