BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00006896
         (406 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023738882.1| RNA-binding protein 34 [Lactuca sativa] >gi|...    87   4e-17
ref|XP_022000383.1| RNA-binding protein 34-like [Helianthus annu...    79   2e-14
gb|KVH90185.1| Nucleotide-binding, alpha-beta plait [Cynara card...    74   2e-12
ref|XP_022033842.1| RNA-binding protein 34-like [Helianthus annu...    62   2e-08
gb|PPD81562.1| hypothetical protein GOBAR_DD21502 [Gossypium bar...    55   5e-06
ref|XP_016736596.1| PREDICTED: nucleolar protein 12-like [Gossyp...    55   5e-06
ref|XP_012439309.1| PREDICTED: RNA-binding protein 34 [Gossypium...    55   5e-06

>ref|XP_023738882.1| RNA-binding protein 34 [Lactuca sativa]
 gb|PLY69848.1| hypothetical protein LSAT_6X4021 [Lactuca sativa]
          Length = 512

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 60/141 (42%), Positives = 79/141 (56%), Gaps = 25/141 (17%)
 Frame = -1

Query: 349 IFQTLFNNTPQDPSN----TIFSDSNPFKAKPST--------LQKLLSLDIDSPQIKNTH 206
           IF++LF    ++P+N    +IFSDSNPF++KP+         LQ++L LDIDSPQ  +  
Sbjct: 24  IFKSLFGGGLEEPNNPTSDSIFSDSNPFRSKPANESQSIPQKLQEVLRLDIDSPQKNDAK 83

Query: 205 ITESSN-LPTKRKKSQK----YDSDDE------KNAKKLKG--GDGFSVKSXXXXXXXXX 65
           I +S N LP+KRK+ +K     DSDD       K +KK KG   +G    S         
Sbjct: 84  IPDSVNTLPSKRKRKEKLPESIDSDDSDIEGDVKKSKKEKGVVSEGSKSSSFDEEKKKKK 143

Query: 64  XXXXDEVEAEYEERKYGVVDV 2
                EVEAEYEERKYG +DV
Sbjct: 144 KRKRGEVEAEYEERKYGAMDV 164


>ref|XP_022000383.1| RNA-binding protein 34-like [Helianthus annuus]
 gb|OTG00833.1| putative RNA-binding (RRM/RBD/RNP motifs) family protein
           [Helianthus annuus]
          Length = 509

 Score = 79.3 bits (194), Expect = 2e-14
 Identities = 59/139 (42%), Positives = 71/139 (51%), Gaps = 23/139 (16%)
 Frame = -1

Query: 349 IFQTLFNNT----PQDPSN-TIFSDSNPFKAKPST----LQKLLSLDIDSPQIKNTHITE 197
           IF+TLF  T    P DPS+ +IFSDSNPF+ KP+     LQ++L LDIDSPQ  +T I  
Sbjct: 21  IFKTLFGITNIQEPNDPSSVSIFSDSNPFRTKPTNESQKLQQILQLDIDSPQKNHTQIPN 80

Query: 196 SSN---LPTKRKKSQKYDSDD---EKNAKKLKGGDG--------FSVKSXXXXXXXXXXX 59
           S N      KRK  QK D DD   E   KK K  +           +             
Sbjct: 81  SPNKLLSKRKRKDKQKIDQDDSDIESEVKKSKLENAVVSERLKRLVIDEEDDNKRKKKKR 140

Query: 58  XXDEVEAEYEERKYGVVDV 2
              +VEAEYEERKYG VD+
Sbjct: 141 KRADVEAEYEERKYGGVDL 159


>gb|KVH90185.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 462

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 56/140 (40%), Positives = 73/140 (52%), Gaps = 24/140 (17%)
 Frame = -1

Query: 349 IFQTLFNN---TPQDPSN-TIFSDSNPFKAK--------PSTLQKLLSLDIDSPQIKNTH 206
           IF++LF      P DP++ +IFSDSNPF++K        P  LQ++L LDIDSP+  +  
Sbjct: 24  IFKSLFGGGVEEPDDPTSVSIFSDSNPFRSKHTNESQVIPEKLQQVLRLDIDSPRKNDPL 83

Query: 205 ITES-SNLPTKRKKSQKY-------DSDDEKNAKKLKGGDGFSVKSXXXXXXXXXXXXXD 50
           I +S S    KRK+ +K        DSD E   KK K   GF  +S              
Sbjct: 84  IPDSASEAVNKRKRKEKLPNNNDSGDSDIEGEIKKSKVESGFVAESSKSTNFDEEKKKKK 143

Query: 49  ----EVEAEYEERKYGVVDV 2
               EVEAEYEERKYG +D+
Sbjct: 144 RKRDEVEAEYEERKYGAMDL 163


>ref|XP_022033842.1| RNA-binding protein 34-like [Helianthus annuus]
 gb|OTG27345.1| putative nucleotide-binding alpha-beta plait domain-containing
           protein [Helianthus annuus]
          Length = 500

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 18/134 (13%)
 Frame = -1

Query: 349 IFQTLFNNTPQDPSN----TIFSDSNPFKAKPSTLQK----LLSLDIDSPQIKNTHITES 194
           IF++LF +T Q+P++    +IFSDSNPF+ KP+   +    +L  +    Q  +T I  S
Sbjct: 25  IFKSLFGSTHQEPNDPSSVSIFSDSNPFRTKPTKDSQKDPQILQPNTIISQNNDTQIPNS 84

Query: 193 SNLPTKRKKSQKYDSDDEKNAKKLKGGDGFSVKSXXXXXXXXXXXXXD----------EV 44
            N P  +KK++K     +++ KK    +G   +S             +          EV
Sbjct: 85  PNNPLNKKKNEKSPKKVDQDTKKSNIPNGVVSESPKSSKSLSLDEVDENKKKKKKKKAEV 144

Query: 43  EAEYEERKYGVVDV 2
           EAEYEERKYG VD+
Sbjct: 145 EAEYEERKYGGVDL 158


>gb|PPD81562.1| hypothetical protein GOBAR_DD21502 [Gossypium barbadense]
          Length = 515

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
 Frame = -1

Query: 349 IFQTLFNNT--PQDPSNTIFSDSNPFKAKPSTL----QKLLSLDIDSPQIKNT-----HI 203
           IF+T+F +   P   ++++FSD NPFK KP       +K+ SLD D  ++K+        
Sbjct: 24  IFKTIFGDITEPNAAASSLFSDDNPFKRKPEETVKNPEKVYSLDSDMVELKHRKRKEKEK 83

Query: 202 TESSNLPTKRKKSQKYDSDDEKNAKKLKGGDGFSVKSXXXXXXXXXXXXXDEVEAEYEER 23
            E+  L +  + ++   S   +N++ L  G   S                DEVE EYEER
Sbjct: 84  AENLTLGSSEEATETQKSKKGRNSENLNLGSLDSNVESSGLDAKGKKRKRDEVEKEYEER 143

Query: 22  KYGVVDV 2
           KYG V V
Sbjct: 144 KYGTVAV 150


>ref|XP_016736596.1| PREDICTED: nucleolar protein 12-like [Gossypium hirsutum]
          Length = 515

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
 Frame = -1

Query: 349 IFQTLFNNT--PQDPSNTIFSDSNPFKAKPSTL----QKLLSLDIDSPQIKNT-----HI 203
           IF+T+F +   P   ++++FSD NPFK KP       +K+ SLD D  ++K+        
Sbjct: 24  IFKTIFGDITEPNAAASSLFSDDNPFKRKPEETVKNPEKVYSLDSDMVELKHRKRKEKEK 83

Query: 202 TESSNLPTKRKKSQKYDSDDEKNAKKLKGGDGFSVKSXXXXXXXXXXXXXDEVEAEYEER 23
            E+  L +  + ++   S   +N++ L  G   S                DEVE EYEER
Sbjct: 84  AENLTLGSSEEATETQKSKKGRNSENLNLGSLDSNVESSGLDAKGKKRKRDEVEKEYEER 143

Query: 22  KYGVVDV 2
           KYG V V
Sbjct: 144 KYGTVAV 150


>ref|XP_012439309.1| PREDICTED: RNA-binding protein 34 [Gossypium raimondii]
 gb|KJB51628.1| hypothetical protein B456_008G225500 [Gossypium raimondii]
          Length = 515

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
 Frame = -1

Query: 349 IFQTLFNNT--PQDPSNTIFSDSNPFKAKPSTL----QKLLSLDIDSPQIKNT-----HI 203
           IF+T+F +   P   ++++FSD NPFK KP       +K+ SLD D  ++K+        
Sbjct: 24  IFKTIFGDITEPNAAASSLFSDDNPFKRKPEETVKNPEKVYSLDSDMVELKHRKRKEKEK 83

Query: 202 TESSNLPTKRKKSQKYDSDDEKNAKKLKGGDGFSVKSXXXXXXXXXXXXXDEVEAEYEER 23
            E+  L +  + ++   S   +N++ L  G   S                DEVE EYEER
Sbjct: 84  AENLTLGSSEEATETQKSKKGRNSENLNLGSLDSNVESSGLDAKGKKRKRDEVEKEYEER 143

Query: 22  KYGVVDV 2
           KYG V V
Sbjct: 144 KYGTVAV 150