BLASTX nr result

ID: Chrysanthemum22_contig00006341 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00006341
         (472 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023758903.1| ras-related protein RABH1b-like [Lactuca sat...    55   3e-06
gb|KVH95236.1| Ran GTPase [Cynara cardunculus var. scolymus]           55   3e-06
ref|XP_021969306.1| ras-related protein RABH1b-like [Helianthus ...    54   7e-06

>ref|XP_023758903.1| ras-related protein RABH1b-like [Lactuca sativa]
 gb|PLY89198.1| hypothetical protein LSAT_3X16060 [Lactuca sativa]
          Length = 206

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 27/33 (81%), Positives = 27/33 (81%)
 Frame = -3

Query: 470 ETLSSTKHEEMVDVNLKXXXXXXSQPESGGCAC 372
           ETLSSTKHEEMVDVNLK      SQPESGGCAC
Sbjct: 174 ETLSSTKHEEMVDVNLKSTSMSSSQPESGGCAC 206


>gb|KVH95236.1| Ran GTPase [Cynara cardunculus var. scolymus]
          Length = 206

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 27/33 (81%), Positives = 27/33 (81%)
 Frame = -3

Query: 470 ETLSSTKHEEMVDVNLKXXXXXXSQPESGGCAC 372
           ETLSSTKHEEMVDVNLK      SQPESGGCAC
Sbjct: 174 ETLSSTKHEEMVDVNLKSSNMTSSQPESGGCAC 206


>ref|XP_021969306.1| ras-related protein RABH1b-like [Helianthus annuus]
 gb|OTG22047.1| putative small GTPase superfamily, Ran GTPase, P-loop containing
           nucleoside triphosphate hydrolase [Helianthus annuus]
          Length = 207

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = -3

Query: 470 ETLSSTKHEEMVDVNLKXXXXXXSQPESGGCAC 372
           ETLSSTKHEE+VDVNLK      SQPESGGCAC
Sbjct: 175 ETLSSTKHEELVDVNLKSSSVSSSQPESGGCAC 207


Top