BLASTX nr result

ID: Chrysanthemum22_contig00005764 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00005764
         (419 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTF90702.1| putative nucleotide-binding alpha-beta plait doma...    67   7e-11
ref|XP_022015396.1| glycine-rich RNA-binding protein 2, mitochon...    67   8e-11
gb|KVI06464.1| Nucleotide-binding, alpha-beta plait [Cynara card...    65   8e-10
gb|OTG16330.1| putative nucleotide-binding alpha-beta plait doma...    59   1e-07
ref|XP_021983854.1| glycine-rich RNA-binding protein 2, mitochon...    59   1e-07

>gb|OTF90702.1| putative nucleotide-binding alpha-beta plait domain-containing
           protein [Helianthus annuus]
          Length = 215

 Score = 67.4 bits (163), Expect = 7e-11
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = +1

Query: 229 ESQSFGSNDSFASGGADAGNSFAAEDGPVEGSFRDNDEPDDFAKRA 366
           ESQSFG  DSF +  AD GN+F   DG V GS+RD+DEPDDFAKRA
Sbjct: 170 ESQSFGGGDSFGNDNADPGNTFGDADGQVGGSYRDHDEPDDFAKRA 215


>ref|XP_022015396.1| glycine-rich RNA-binding protein 2, mitochondrial-like [Helianthus
           annuus]
          Length = 224

 Score = 67.4 bits (163), Expect = 8e-11
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = +1

Query: 229 ESQSFGSNDSFASGGADAGNSFAAEDGPVEGSFRDNDEPDDFAKRA 366
           ESQSFG  DSF +  AD GN+F   DG V GS+RD+DEPDDFAKRA
Sbjct: 179 ESQSFGGGDSFGNDNADPGNTFGDADGQVGGSYRDHDEPDDFAKRA 224


>gb|KVI06464.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 253

 Score = 65.1 bits (157), Expect = 8e-10
 Identities = 32/47 (68%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
 Frame = +1

Query: 238 SFGS----NDSFASGGADAGNSFAAEDGPVEGSFRDNDEPDDFAKRA 366
           S+GS    + SFA   AD GNSFAA++GPVEGS+RDNDE DDFAKRA
Sbjct: 207 SYGSAGTESQSFAGDNADGGNSFAADNGPVEGSYRDNDEADDFAKRA 253


>gb|OTG16330.1| putative nucleotide-binding alpha-beta plait domain-containing
           protein [Helianthus annuus]
          Length = 235

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 33/49 (67%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
 Frame = +1

Query: 229 ESQSFGS---NDSFASGGADAGNSFAAEDGPVEGSFRDNDEPDDFAKRA 366
           ESQ+FG     DSFAS  ADA     A DGPVEGS+RDNDE DDFAKRA
Sbjct: 192 ESQNFGGVGGGDSFASDSADA-----AADGPVEGSYRDNDESDDFAKRA 235


>ref|XP_021983854.1| glycine-rich RNA-binding protein 2, mitochondrial [Helianthus
           annuus]
          Length = 257

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 33/49 (67%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
 Frame = +1

Query: 229 ESQSFGS---NDSFASGGADAGNSFAAEDGPVEGSFRDNDEPDDFAKRA 366
           ESQ+FG     DSFAS  ADA     A DGPVEGS+RDNDE DDFAKRA
Sbjct: 214 ESQNFGGVGGGDSFASDSADA-----AADGPVEGSYRDNDESDDFAKRA 257


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