BLASTX nr result

ID: Chrysanthemum22_contig00005565 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00005565
         (578 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH95179.1| JmjC domain-containing protein [Cynara cardunculu...    75   3e-12

>gb|KVH95179.1| JmjC domain-containing protein [Cynara cardunculus var. scolymus]
          Length = 786

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 38/61 (62%), Positives = 44/61 (72%), Gaps = 9/61 (14%)
 Frame = +1

Query: 52  IKYKQMGNEEATSIHGS-------YKLGK--RARERPPLNTCSKRLKVKGPSVTGLEHRY 204
           + YK++GN+EA S HG        YK GK  R RERPPL TC KRLKVKGPS+TGLEHR+
Sbjct: 726 VNYKKLGNKEAVSKHGEHQRDHGFYKQGKGTRERERPPLETCPKRLKVKGPSITGLEHRF 785

Query: 205 L 207
           L
Sbjct: 786 L 786


Top