BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00005503
         (1168 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI11060.1| Nucleotide-binding, alpha-beta plait, partial [Cy...   478   e-163
gb|KVI03048.1| Nucleotide-binding, alpha-beta plait [Cynara card...   375   e-123
ref|XP_021970825.1| regulator of nonsense transcripts UPF3-like ...   372   e-122
gb|OTG23462.1| putative smg-4/UPF3 family protein [Helianthus an...   370   e-121
ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts...   357   e-116
ref|XP_019079126.1| PREDICTED: regulator of nonsense transcripts...   357   e-116
ref|XP_021663316.1| regulator of nonsense transcripts UPF3-like ...   346   e-112
emb|CDO97628.1| unnamed protein product [Coffea canephora]            343   e-111
ref|XP_021663317.1| regulator of nonsense transcripts UPF3-like ...   338   e-109
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts...   336   e-108
ref|XP_006431585.1| regulator of nonsense transcripts UPF3 [Citr...   336   e-108
ref|XP_015579218.1| PREDICTED: regulator of nonsense transcripts...   335   e-107
dbj|GAY63187.1| hypothetical protein CUMW_223600 [Citrus unshiu]...   333   e-107
ref|XP_020533244.1| regulator of nonsense transcripts UPF3 isofo...   330   e-105
ref|XP_018811002.1| PREDICTED: regulator of nonsense transcripts...   329   e-105
ref|XP_018811001.1| PREDICTED: regulator of nonsense transcripts...   329   e-105
gb|OMO75152.1| Regulator of nonsense-mediated decay, UPF3 [Corch...   321   e-102
ref|XP_023731231.1| regulator of nonsense transcripts UPF3-like ...   316   e-101
gb|PLY75844.1| hypothetical protein LSAT_9X119700 [Lactuca sativa]    316   e-100
ref|XP_021286730.1| regulator of nonsense transcripts UPF3 isofo...   310   8e-98

>gb|KVI11060.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
            var. scolymus]
          Length = 556

 Score =  478 bits (1230), Expect = e-163
 Identities = 258/390 (66%), Positives = 287/390 (73%), Gaps = 4/390 (1%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGTI+KDPEYL+F+ELLAKPVENLPSAEIQLERKEAERAGTAKE PI
Sbjct: 96   QRVPKQWSKKDGREGTIEKDPEYLQFLELLAKPVENLPSAEIQLERKEAERAGTAKEAPI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            +TPLM+F+RQKRAAKGGPRRSL NG+L R            + + +RGSERRR STTMYV
Sbjct: 156  VTPLMDFVRQKRAAKGGPRRSLPNGKLTRRASGASSSSSSSTPL-KRGSERRRTSTTMYV 214

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGAS---DXXXXXX 638
            PRD G GR+GKEKSTY+QV KRDDQ +SEK  GS AASGSVVL+EG G+S   D      
Sbjct: 215  PRDTGKGRSGKEKSTYIQVQKRDDQSLSEKSVGSYAASGSVVLEEGRGSSGTPDIGKKKI 274

Query: 637  XXXXXXXXXIPHL-TXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQS 461
                     IPH+ T                   LK+NQQREASGRIIRSIL+NKD +Q+
Sbjct: 275  LLLKGKEKEIPHMTTGLSPQQSSLSVKLSHGSGALKQNQQREASGRIIRSILLNKDTQQN 334

Query: 460  RSEQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTRNKDR 281
            +SEQQNQ  +R MDRRPPR  NVPP LKDSN LPDD V+GHD+HGFYSEKQDKRTRN+DR
Sbjct: 335  QSEQQNQTSSRVMDRRPPRPPNVPPPLKDSNGLPDDMVAGHDLHGFYSEKQDKRTRNRDR 394

Query: 280  PDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDVKPIG 101
            PDRGVWTPLRR                    + PDSAEGT  E K DLSN RG D K IG
Sbjct: 395  PDRGVWTPLRRSDGSHASDESLSSSTSQSTQMQPDSAEGTHGEVKSDLSNARGGDFKTIG 454

Query: 100  SGRGGNFSVDNGSYKHGGRRGPSYNATKDA 11
            SGRGG+FSVDNGS+KHGGRRGPS+NA KDA
Sbjct: 455  SGRGGHFSVDNGSHKHGGRRGPSHNA-KDA 483


>gb|KVI03048.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
            scolymus]
          Length = 549

 Score =  375 bits (962), Expect = e-123
 Identities = 231/425 (54%), Positives = 265/425 (62%), Gaps = 39/425 (9%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGTI KDPEYLEF+E ++KPVENLPSAEIQLERKEAERAG AKE PI
Sbjct: 117  QRVPKQWSKKDGREGTIGKDPEYLEFLEFVSKPVENLPSAEIQLERKEAERAGAAKEAPI 176

Query: 988  ITPLMNFIRQKRAAKGGPR----------------------RSLLNGRLARTIGAXXXXX 875
            +TPLM+FIRQKRAAKGGPR                      RSL NG+L R  GA     
Sbjct: 177  VTPLMDFIRQKRAAKGGPRDNFLSSVIWYLCILTAFNNLLQRSLPNGKLMRRAGA--SSS 234

Query: 874  XXXSAVPRRGSERRRASTTMYVPRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAAS 695
               S++ +RGSE+R  S TMYV RD+G   N K+KS YV   KRDD+ VSEK   SSAAS
Sbjct: 235  SSSSSIVKRGSEKRMTS-TMYVLRDSGKSTNVKDKSAYV---KRDDRQVSEKSLSSSAAS 290

Query: 694  GSVVLDE---GWGASDXXXXXXXXXXXXXXXIPHL-TXXXXXXXXXXXXXXXXXXXLKKN 527
            GSV+ +E    +GASD               IPH+ T                    ++N
Sbjct: 291  GSVLQEEERGAFGASDTGKKKILLLKGKEKEIPHVTTGLTPQQNSSSVKLAYGSGAGRQN 350

Query: 526  QQREASGRIIRSILVNKDARQSRS----EQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLP 359
            Q+ EASGRIIRSIL+NKD RQS++     +QNQ  N+D DRRPPR  N+ PLLKDSN LP
Sbjct: 351  QRHEASGRIIRSILLNKDTRQSQASAVQSEQNQTLNQDKDRRPPRPQNM-PLLKDSNGLP 409

Query: 358  DDKVSGHDVHGFYSEKQDKRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPP 179
            DDKV GHD+HGFYSEKQDKR+RN+D+PDRGVWTPLRR                    V P
Sbjct: 410  DDKVHGHDLHGFYSEKQDKRSRNRDKPDRGVWTPLRRSDGPHASDESLSSSTSQSTQVLP 469

Query: 178  DSAEG---------TQKEGKYDLSNTRGWDVKPIGSGRGGNFSVDNGSYKHGGRRGPSYN 26
            DSAEG         T+ E KYDLSN            RGG+FS DNGS+KH GRR  S+N
Sbjct: 470  DSAEGLYLSCGSPVTRGEAKYDLSNE-----------RGGHFSADNGSHKHSGRRISSHN 518

Query: 25   ATKDA 11
            A KDA
Sbjct: 519  A-KDA 522


>ref|XP_021970825.1| regulator of nonsense transcripts UPF3-like [Helianthus annuus]
          Length = 483

 Score =  372 bits (955), Expect = e-122
 Identities = 234/391 (59%), Positives = 255/391 (65%), Gaps = 5/391 (1%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGTIDKDP+YLEF+ELLAKPVENLPSAEIQLERKEAERAGTAKE PI
Sbjct: 96   QRVPKQWSKKDGREGTIDKDPQYLEFLELLAKPVENLPSAEIQLERKEAERAGTAKEAPI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLA-RTIGAXXXXXXXXSAVPRRGSERRRASTTMY 812
            +TPLM+F+RQKRAAKGG RR+LLNG+LA RT GA        SA  +RGSE RR STTMY
Sbjct: 156  VTPLMDFVRQKRAAKGGSRRALLNGKLARRTSGA--SSSSSTSAALKRGSE-RRTSTTMY 212

Query: 811  VPRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGASDXXXXXXXX 632
            VPRD G  R+GKEKSTYVQ+  RD Q +SEKP  SS+ SGSVVL    G+SD        
Sbjct: 213  VPRDTGKSRSGKEKSTYVQIQNRDGQQLSEKPAASSSVSGSVVLG---GSSDTGKKKILL 269

Query: 631  XXXXXXXIPHL--TXXXXXXXXXXXXXXXXXXXLKKNQQRE-ASGRIIRSILVNKDARQS 461
                   IPH+                      LK NQQRE  SGR+IRSILVNK   Q+
Sbjct: 270  LKGKEKEIPHMGTGLSPQQNVASSVKLLQNSGGLKPNQQREGGSGRMIRSILVNK---QN 326

Query: 460  RSEQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKR-TRNKD 284
            +SEQQNQ PN  M+RRPP     P     SN LPDD               DKR TRNKD
Sbjct: 327  QSEQQNQPPN--MERRPP-----PRPSPHSNGLPDD-------------NYDKRSTRNKD 366

Query: 283  RPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDVKPI 104
            RPDRGVWTPL+                     VP DSAEGT  E K DLS  R  D KPI
Sbjct: 367  RPDRGVWTPLKH------SDESLSSSNSQFTQVPLDSAEGTHGEVKNDLSIARSGDSKPI 420

Query: 103  GSGRGGNFSVDNGSYKHGGRRGPSYNATKDA 11
            GSGRGG+FSVDNGSYKHGGRRGPS+N  KDA
Sbjct: 421  GSGRGGHFSVDNGSYKHGGRRGPSHN-VKDA 450


>gb|OTG23462.1| putative smg-4/UPF3 family protein [Helianthus annuus]
          Length = 507

 Score =  370 bits (951), Expect = e-121
 Identities = 234/391 (59%), Positives = 255/391 (65%), Gaps = 5/391 (1%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGTIDKDP+YLEF+ELLAKPVENLPSAEIQLERKEAERAGTAKE PI
Sbjct: 96   QRVPKQWSKKDGREGTIDKDPQYLEFLELLAKPVENLPSAEIQLERKEAERAGTAKEAPI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLA-RTIGAXXXXXXXXSAVPRRGSERRRASTTMY 812
            +TPLM+F+RQKRAAKGG RR+LLNG+LA RT GA        SA  +RGSE RR STTMY
Sbjct: 156  VTPLMDFVRQKRAAKGGSRRALLNGKLARRTSGA--SSSSSTSAALKRGSE-RRTSTTMY 212

Query: 811  VPRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGASDXXXXXXXX 632
            VPRD G  R+GKEKSTYVQ+  RD Q +SEKP  SS+ SGSVVL  G  +SD        
Sbjct: 213  VPRDTGKSRSGKEKSTYVQIQNRDGQQLSEKPAASSSVSGSVVL--GVCSSDTGKKKILL 270

Query: 631  XXXXXXXIPHL--TXXXXXXXXXXXXXXXXXXXLKKNQQRE-ASGRIIRSILVNKDARQS 461
                   IPH+                      LK NQQRE  SGR+IRSILVNK   Q+
Sbjct: 271  LKGKEKEIPHMGTGLSPQQNVASSVKLLQNSGGLKPNQQREGGSGRMIRSILVNK---QN 327

Query: 460  RSEQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKR-TRNKD 284
            +SEQQNQ PN  M+RRPP     P     SN LPDD               DKR TRNKD
Sbjct: 328  QSEQQNQPPN--MERRPP-----PRPSPHSNGLPDD-------------NYDKRSTRNKD 367

Query: 283  RPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDVKPI 104
            RPDRGVWTPL+                     VP DSAEGT  E K DLS  R  D KPI
Sbjct: 368  RPDRGVWTPLKH------SDESLSSSNSQFTQVPLDSAEGTHGEVKNDLSIARSGDSKPI 421

Query: 103  GSGRGGNFSVDNGSYKHGGRRGPSYNATKDA 11
            GSGRGG+FSVDNGSYKHGGRRGPS+N  KDA
Sbjct: 422  GSGRGGHFSVDNGSYKHGGRRGPSHN-VKDA 451


>ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X4 [Vitis
            vinifera]
 emb|CBI29694.3| unnamed protein product, partial [Vitis vinifera]
          Length = 519

 Score =  357 bits (915), Expect = e-116
 Identities = 200/392 (51%), Positives = 248/392 (63%), Gaps = 6/392 (1%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QR+PK W KKDGREGTI KDPEY+EFVELLAKPVENLPSAEIQLER+EAERAG  K+ PI
Sbjct: 96   QRIPKHWPKKDGREGTIFKDPEYMEFVELLAKPVENLPSAEIQLERREAERAGAVKDTPI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            +TPLM+F+RQKRAAKG  RRSL NG+L+R             +  +RGSE+RR STTMYV
Sbjct: 156  VTPLMDFVRQKRAAKGVSRRSLSNGKLSRRASGSSSGNPSLGS-SKRGSEKRRLSTTMYV 214

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGASDXXXXXXXXX 629
             RD     + K+KST++ V KRDDQL+S+K    +A  G+  L+E  G S          
Sbjct: 215  LRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKV 274

Query: 628  XXXXXXIPHLT-XXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQSRS- 455
                     ++                     K+NQ+RE SGRIIRSIL+NKDARQS+S 
Sbjct: 275  LLLKGKEREISHHLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSS 334

Query: 454  ----EQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTRNK 287
                EQQ+Q  N + ++RPPR  ++    K++N   DDKV G+DVH F SEKQDKRTRNK
Sbjct: 335  MFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNK 394

Query: 286  DRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDVKP 107
            DRPDRGVWTPLRR                       D  EG+  E + D+SN R  +VK 
Sbjct: 395  DRPDRGVWTPLRR--SDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNARSGEVKA 452

Query: 106  IGSGRGGNFSVDNGSYKHGGRRGPSYNATKDA 11
            +GSGRGG+ ++DNGS+KH GRRGP++ + KDA
Sbjct: 453  LGSGRGGHSALDNGSHKHSGRRGPTH-SVKDA 483


>ref|XP_019079126.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
            vinifera]
 ref|XP_019079127.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
            vinifera]
          Length = 533

 Score =  357 bits (915), Expect = e-116
 Identities = 200/392 (51%), Positives = 248/392 (63%), Gaps = 6/392 (1%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QR+PK W KKDGREGTI KDPEY+EFVELLAKPVENLPSAEIQLER+EAERAG  K+ PI
Sbjct: 96   QRIPKHWPKKDGREGTIFKDPEYMEFVELLAKPVENLPSAEIQLERREAERAGAVKDTPI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            +TPLM+F+RQKRAAKG  RRSL NG+L+R             +  +RGSE+RR STTMYV
Sbjct: 156  VTPLMDFVRQKRAAKGVSRRSLSNGKLSRRASGSSSGNPSLGS-SKRGSEKRRLSTTMYV 214

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGASDXXXXXXXXX 629
             RD     + K+KST++ V KRDDQL+S+K    +A  G+  L+E  G S          
Sbjct: 215  LRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKV 274

Query: 628  XXXXXXIPHLT-XXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQSRS- 455
                     ++                     K+NQ+RE SGRIIRSIL+NKDARQS+S 
Sbjct: 275  LLLKGKEREISHHLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSS 334

Query: 454  ----EQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTRNK 287
                EQQ+Q  N + ++RPPR  ++    K++N   DDKV G+DVH F SEKQDKRTRNK
Sbjct: 335  MFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNK 394

Query: 286  DRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDVKP 107
            DRPDRGVWTPLRR                       D  EG+  E + D+SN R  +VK 
Sbjct: 395  DRPDRGVWTPLRR--SDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNARSGEVKA 452

Query: 106  IGSGRGGNFSVDNGSYKHGGRRGPSYNATKDA 11
            +GSGRGG+ ++DNGS+KH GRRGP++ + KDA
Sbjct: 453  LGSGRGGHSALDNGSHKHSGRRGPTH-SVKDA 483


>ref|XP_021663316.1| regulator of nonsense transcripts UPF3-like isoform X1 [Hevea
            brasiliensis]
          Length = 518

 Score =  346 bits (887), Expect = e-112
 Identities = 197/386 (51%), Positives = 248/386 (64%), Gaps = 8/386 (2%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGRE TI KD  YLEF+E ++KP ENLPSAEIQLER+EAERAG AK+ PI
Sbjct: 96   QRVPKQWSKKDGRECTILKDHAYLEFLESISKPAENLPSAEIQLERREAERAGAAKDAPI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            ITPLM+F+RQKRAAK G RR L NG+L+R  GA         +  +R S+++R STTMYV
Sbjct: 156  ITPLMDFVRQKRAAKSGSRRILANGKLSRRAGASGSPSS---SSSKRSSDKKRLSTTMYV 212

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGAS---DXXXXXX 638
             RD+    +GKEKSTY+ V KRDDQ +S+K    ++ASG+ VL++  G S   D      
Sbjct: 213  LRDSAKSTSGKEKSTYILVPKRDDQHLSDKAVTLASASGTEVLEDESGISGIADARKKKI 272

Query: 637  XXXXXXXXXIPHLTXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQSR 458
                     I  L+                   LK++Q+REASGRIIRSIL+NKD+RQ++
Sbjct: 273  LLLKGKEKEISTLSGGMSQQNAASFDKNQTSPALKQSQRREASGRIIRSILLNKDSRQNQ 332

Query: 457  S-----EQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTR 293
            S     EQQNQ  N + D+RPPR  +V  +LKD+N   DDKV G+D+H F  EKQ+KRTR
Sbjct: 333  SSGVQSEQQNQTSNFEKDKRPPRPQHVQLILKDANGDSDDKVVGNDLHSFSGEKQEKRTR 392

Query: 292  NKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDV 113
            +KDRPDRG+W PLRR                       DS++G   + K D  N+R  +V
Sbjct: 393  SKDRPDRGIWAPLRRSDESYASDESILSSASQSAQSGVDSSQGNLGDTKVDPLNSRSGEV 452

Query: 112  KPIGSGRGGNFSVDNGSYKHGGRRGP 35
            K +GSGRGG+ S+DNGS+KH GRRGP
Sbjct: 453  KTLGSGRGGHSSLDNGSHKHFGRRGP 478


>emb|CDO97628.1| unnamed protein product [Coffea canephora]
          Length = 517

 Score =  343 bits (880), Expect = e-111
 Identities = 205/396 (51%), Positives = 250/396 (63%), Gaps = 9/396 (2%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGTI KDPEYLEF+E LAKPVENLPSAEIQLERKEAERAG  KE  I
Sbjct: 96   QRVPKQWSKKDGREGTILKDPEYLEFLEFLAKPVENLPSAEIQLERKEAERAGVTKEAAI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            +TPLM+F+RQKRAAK G RRS  NG+  R +          S+  +RGSE+RR STTMY+
Sbjct: 156  VTPLMDFVRQKRAAKSGTRRSASNGKSNRRVSGASIGGPSSSS-SKRGSEKRRMSTTMYI 214

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGAS---DXXXXXX 638
             RDN    +GK+KSTY+ V K+DDQ +S+K   S+AA G+  L+E  G S   D      
Sbjct: 215  LRDNAKATSGKDKSTYILVPKQDDQHLSDKSVTSAAACGNGELEEESGDSGPTDSGKKKI 274

Query: 637  XXXXXXXXXIPHLT-XXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQS 461
                     IPH++                    LK+NQ+REASG+IIRSIL+ KD RQ+
Sbjct: 275  LLLKGKEKEIPHMSGGSPVQQSTASPFKNPPSSALKQNQRREASGKIIRSILL-KDNRQN 333

Query: 460  -----RSEQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRT 296
                 RS+QQNQ  N + D+RPPR  +V  L KD+N   DDKV  +D+H  +SEKQ+KRT
Sbjct: 334  QPSSVRSDQQNQTVNLERDKRPPRPPSVQLLQKDANVASDDKVP-NDIHNIHSEKQEKRT 392

Query: 295  RNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWD 116
            RNKDRPDR VWTPLRR                   +   D+ EGTQ E K D+S+ RG +
Sbjct: 393  RNKDRPDRVVWTPLRRSDGSHTSDESLSSSASQSAV---DATEGTQLEMKSDMSSARGGE 449

Query: 115  VKPIGSGRGGNFSVDNGSYKHGGRRGPSYNATKDAA 8
             +  GSGRG   S DNGSY+HGGRRG ++    D +
Sbjct: 450  FRHGGSGRGSQSSTDNGSYRHGGRRGSAHVKDSDGS 485


>ref|XP_021663317.1| regulator of nonsense transcripts UPF3-like isoform X2 [Hevea
            brasiliensis]
          Length = 512

 Score =  338 bits (867), Expect = e-109
 Identities = 195/386 (50%), Positives = 245/386 (63%), Gaps = 8/386 (2%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGRE TI KD  YLEF+E ++KP ENLPSAEIQLER+EAERAG AK+ PI
Sbjct: 96   QRVPKQWSKKDGRECTILKDHAYLEFLESISKPAENLPSAEIQLERREAERAGAAKDAPI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            ITPLM+F+RQKRAAK G RR L NG+L+R  GA         +  +R S+++R STTMYV
Sbjct: 156  ITPLMDFVRQKRAAKSGSRRILANGKLSRRAGASGSPSS---SSSKRSSDKKRLSTTMYV 212

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGAS---DXXXXXX 638
             RD+    +GKEKSTY+ V KRDDQ +S+K    ++ASG+ VL++  G S   D      
Sbjct: 213  LRDSAKSTSGKEKSTYILVPKRDDQHLSDKAVTLASASGTEVLEDESGISGIADARKKKI 272

Query: 637  XXXXXXXXXIPHLTXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQSR 458
                     I  L+                   LK++Q+REASGRIIRSIL+NKD+RQ++
Sbjct: 273  LLLKGKEKEISTLSGGMSQQNAASFDKNQTSPALKQSQRREASGRIIRSILLNKDSRQNQ 332

Query: 457  S-----EQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTR 293
            S     EQQNQ  N + D+RPPR  +V  +LKD+N   DDKV G+D+H F  EKQ+KRTR
Sbjct: 333  SSGVQSEQQNQTSNFEKDKRPPRPQHVQLILKDANGDSDDKVVGNDLHSFSGEKQEKRTR 392

Query: 292  NKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDV 113
            +KDRPDRG+W PLRR                        +  G   + K D  N+R  +V
Sbjct: 393  SKDRPDRGIWAPLRR------SDESYASDESILSSASQSAQSGNLGDTKVDPLNSRSGEV 446

Query: 112  KPIGSGRGGNFSVDNGSYKHGGRRGP 35
            K +GSGRGG+ S+DNGS+KH GRRGP
Sbjct: 447  KTLGSGRGGHSSLDNGSHKHFGRRGP 472


>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
            sinensis]
          Length = 514

 Score =  336 bits (861), Expect = e-108
 Identities = 196/394 (49%), Positives = 252/394 (63%), Gaps = 6/394 (1%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGT+ KDPEYLEF+E ++KPVENLPSAEIQLER+EAERAG AKE  I
Sbjct: 96   QRVPKQWSKKDGREGTLLKDPEYLEFLEFISKPVENLPSAEIQLERREAERAGAAKEALI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            +TPLM+F+RQKRAAK GPRR L NG+L+R             +  +RGS++++ASTTMYV
Sbjct: 156  VTPLMDFVRQKRAAKAGPRRLLSNGKLSRRASGSSTGSPASGS-SKRGSDKKKASTTMYV 214

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGA---SDXXXXXX 638
             RD     +GK+KSTY+ V KRDDQ   +KP  SS+A+GS V+ E  G    SD      
Sbjct: 215  LRDTAKNSSGKDKSTYILVPKRDDQDF-DKPVSSSSATGSEVVLEESGVPANSDGGKKKV 273

Query: 637  XXXXXXXXXIPHLTXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQSR 458
                     I  ++                   LK+NQ+RE SGRIIR IL+NKDARQ++
Sbjct: 274  LLLKGKEREISQVSGSVSHQQSASVKNIISSPALKQNQRRENSGRIIRGILLNKDARQNQ 333

Query: 457  SE---QQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTRNK 287
            +     + Q+ N + D+RPPR S+V  ++KD+N + DDKV  +D+H   SEKQ++RTRNK
Sbjct: 334  ASGLHSEQQISNLEKDKRPPRPSHVHLVMKDTNGVSDDKVIVNDLH---SEKQERRTRNK 390

Query: 286  DRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDVKP 107
            DRPDR  WT LRR                   L   DS+EG   +GK+DLSN R  +VK 
Sbjct: 391  DRPDRAAWT-LRRSDGSYQSDESLSSSASQLSLSAVDSSEGNLGDGKFDLSNMRSGEVKA 449

Query: 106  IGSGRGGNFSVDNGSYKHGGRRGPSYNATKDAAP 5
            +G GR  + SVDNGS++H GRRGP++    D++P
Sbjct: 450  VGGGRSSHSSVDNGSHRHIGRRGPTH-VKDDSSP 482


>ref|XP_006431585.1| regulator of nonsense transcripts UPF3 [Citrus clementina]
 gb|ESR44825.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
          Length = 514

 Score =  336 bits (861), Expect = e-108
 Identities = 194/386 (50%), Positives = 248/386 (64%), Gaps = 6/386 (1%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGT+ KDPEYLEF+E ++KPVENLPSAEIQLER+EAERAG AKE  I
Sbjct: 96   QRVPKQWSKKDGREGTLLKDPEYLEFLEFISKPVENLPSAEIQLERREAERAGAAKEALI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            +TPLM+F+RQKRAAK GPRR L NG+L+R             +  +RGS++++ASTTMYV
Sbjct: 156  VTPLMDFVRQKRAAKAGPRRLLSNGKLSRRASGSSTGSPASGS-SKRGSDKKKASTTMYV 214

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGA---SDXXXXXX 638
             RD     +GK+KSTY+ V KRDDQ   +KP  SS+A+GS V+ E  G    SD      
Sbjct: 215  LRDTAKNSSGKDKSTYILVPKRDDQDF-DKPVSSSSATGSEVVLEESGVPANSDGGKKKV 273

Query: 637  XXXXXXXXXIPHLTXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQSR 458
                     I  ++                   LK+NQ+RE SGRIIR IL+NKDARQ++
Sbjct: 274  LLLKGKEREISQVSGSVSHQQSASVKTIISSPALKQNQRRENSGRIIRGILLNKDARQNQ 333

Query: 457  SE---QQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTRNK 287
            +     + Q+ N + D+RPPR S+V  ++KD+N + DDKV  +D+H   SEKQ++RTRNK
Sbjct: 334  ASGLHSEQQISNLEKDKRPPRPSHVQLVMKDTNGVSDDKVIVNDLH---SEKQERRTRNK 390

Query: 286  DRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDVKP 107
            DRPDR  WT LRR                   L   DS+EG   +GK+DLSN R  +VK 
Sbjct: 391  DRPDRAAWT-LRRSDGSYQSDESLSSSASQLSLSAVDSSEGNLGDGKFDLSNMRSGEVKA 449

Query: 106  IGSGRGGNFSVDNGSYKHGGRRGPSY 29
            +G GR  + SVDNGS++H GRRGP++
Sbjct: 450  VGGGRSSHSSVDNGSHRHIGRRGPTH 475


>ref|XP_015579218.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Ricinus
            communis]
          Length = 527

 Score =  335 bits (859), Expect = e-107
 Identities = 193/389 (49%), Positives = 247/389 (63%), Gaps = 9/389 (2%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTA-KEGP 992
            Q VPKQWSKKDGREGTI KDP YLEF+EL++KP ENLPSAEIQLER+EAERA +A K+ P
Sbjct: 102  QHVPKQWSKKDGREGTIVKDPAYLEFLELISKPAENLPSAEIQLERREAERAASAAKDAP 161

Query: 991  IITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMY 812
            I+TPLM+F+RQKRAAK G RR L NG+++R  GA         +  +R SE++R S TMY
Sbjct: 162  IVTPLMDFVRQKRAAKTGSRRILSNGKISRRSGASGSPSS---SSSKRSSEKKRVSATMY 218

Query: 811  VPRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGAS---DXXXXX 641
            V RD+    +GK+KSTY+ V KRDDQ  S+K    ++ASG+ VL++  G S   D     
Sbjct: 219  VLRDSAKSTSGKDKSTYLLVPKRDDQQFSDKSTPFASASGTEVLEDESGVSGITDTGKKK 278

Query: 640  XXXXXXXXXXIPHLTXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQS 461
                      I  L+                   +K++Q+RE+SGRIIRSIL+NKD+RQ+
Sbjct: 279  ILLLKGKEKEISALSGGMSKQNAASFDKNVTSSAIKQSQRRESSGRIIRSILLNKDSRQN 338

Query: 460  RS-----EQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRT 296
            +S     EQQ Q  N + ++R PR ++V  +LKD N   DDK  G+D+HGF  EKQ+KRT
Sbjct: 339  QSSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKDVNGSSDDKFVGNDLHGFSGEKQEKRT 398

Query: 295  RNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWD 116
            RNKDRPDR VWTPLRR                       DS++G   + K D SN+R  D
Sbjct: 399  RNKDRPDRVVWTPLRRSDGSYASDESLSSSASQSTHTGQDSSQGNLGDIKVDSSNSRSGD 458

Query: 115  VKPIGSGRGGNFSVDNGSYKHGGRRGPSY 29
            VK +GSGR  + S+DNGS+KH GRRGPS+
Sbjct: 459  VKTLGSGRSSHSSLDNGSHKHFGRRGPSH 487


>dbj|GAY63187.1| hypothetical protein CUMW_223600 [Citrus unshiu]
 dbj|GAY63188.1| hypothetical protein CUMW_223600 [Citrus unshiu]
          Length = 514

 Score =  333 bits (853), Expect = e-107
 Identities = 193/386 (50%), Positives = 247/386 (63%), Gaps = 6/386 (1%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGT+ KDPEYLEF+E ++KPVENLPSAEIQLER+EAERAG AKE  I
Sbjct: 96   QRVPKQWSKKDGREGTLLKDPEYLEFLEFISKPVENLPSAEIQLERREAERAGAAKEALI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            +TPLM+F+RQKRAAK GPRR L NG+L+R             +  +RGS++++ASTTMYV
Sbjct: 156  VTPLMDFVRQKRAAKAGPRRLLSNGKLSRRASGSSTGSPASGS-SKRGSDKKKASTTMYV 214

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGA---SDXXXXXX 638
             RD     +GK+KSTY+ V KRDDQ   +KP  SS+A+GS V+ E  G    SD      
Sbjct: 215  LRDTAKNSSGKDKSTYILVPKRDDQDF-DKPVSSSSATGSEVVLEESGVPANSDGGKKKV 273

Query: 637  XXXXXXXXXIPHLTXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQSR 458
                     I  ++                   LK+NQ+RE SGRIIR IL+NKDA Q++
Sbjct: 274  LLLKGKEREISQVSGSVSHQQSASVKTIISSPALKQNQRRENSGRIIRGILLNKDACQNQ 333

Query: 457  SE---QQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTRNK 287
            +     + Q+ N + D+RPPR S+V  ++KD+N + DDKV  +D+H   SEKQ++RTRNK
Sbjct: 334  ASGLHSEQQISNLEKDKRPPRPSHVQLVMKDTNGVSDDKVIVNDLH---SEKQERRTRNK 390

Query: 286  DRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDVKP 107
            DRPDR  WT LRR                   L   DS+EG   +GK+DLSN R  +VK 
Sbjct: 391  DRPDRAAWT-LRRSDGSYQSDESLSSSASQLSLSAVDSSEGNLGDGKFDLSNMRSGEVKA 449

Query: 106  IGSGRGGNFSVDNGSYKHGGRRGPSY 29
            +G GR  + SVDNGS++H GRRGP++
Sbjct: 450  VGGGRSSHSSVDNGSHRHIGRRGPTH 475


>ref|XP_020533244.1| regulator of nonsense transcripts UPF3 isoform X1 [Jatropha curcas]
 ref|XP_020533245.1| regulator of nonsense transcripts UPF3 isoform X1 [Jatropha curcas]
          Length = 517

 Score =  330 bits (846), Expect = e-105
 Identities = 194/388 (50%), Positives = 245/388 (63%), Gaps = 8/388 (2%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGTI KDP YLEF+EL++KP ENLPSAEIQLER+EAERAG  K+ PI
Sbjct: 96   QRVPKQWSKKDGREGTILKDPAYLEFLELISKPAENLPSAEIQLERREAERAGIIKDAPI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            ITPLM+F+RQKRAAK G RR L NG+L+R  G          +  +R SE++R STTMYV
Sbjct: 156  ITPLMDFVRQKRAAKTGSRRILGNGKLSRRAGTSGSPGS---SSSKRSSEKKRVSTTMYV 212

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGAS---DXXXXXX 638
             RD     +GK+KSTY+ V KRDDQ +S+K      ASG+ VL++  GAS   D      
Sbjct: 213  LRDTAKSTSGKDKSTYILVPKRDDQQLSDKAVTLGTASGAEVLEDESGASGITDAGKKKI 272

Query: 637  XXXXXXXXXIPHLTXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQSR 458
                     I  L+                   +K+NQ+REASGRIIRSIL+NK++RQ++
Sbjct: 273  LLLKGKEKEISDLSGFMLQQNAASFDKNVISSAVKQNQRREASGRIIRSILLNKESRQNQ 332

Query: 457  S-----EQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTR 293
            S     E Q Q  N + ++RPPR  +V  +L  + +L DDKV  +D+HGF  EKQ+KRTR
Sbjct: 333  SSGIQSEHQMQTSNSEKEKRPPRPPHVQLVLNTNGAL-DDKVVINDLHGFSGEKQEKRTR 391

Query: 292  NKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDV 113
            NKDRPDR VWTPLRR                       DS++G   + K D SN+R  +V
Sbjct: 392  NKDRPDRVVWTPLRRSDGSYASDESLSLSASQSTQSGVDSSQGNLGDLKVDPSNSRSGEV 451

Query: 112  KPIGSGRGGNFSVDNGSYKHGGRRGPSY 29
            K + +GRG + S+DNGS+KH GRRGPS+
Sbjct: 452  KTL-TGRGSHSSLDNGSHKHFGRRGPSH 478


>ref|XP_018811002.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Juglans regia]
 ref|XP_018811003.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Juglans regia]
          Length = 519

 Score =  329 bits (844), Expect = e-105
 Identities = 191/388 (49%), Positives = 242/388 (62%), Gaps = 8/388 (2%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGTI KDPEYLEF+E LAKPVENLPSAEIQLER+EAER G AKE  +
Sbjct: 96   QRVPKQWSKKDGREGTILKDPEYLEFLEYLAKPVENLPSAEIQLERREAERGGAAKEALV 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            +TPLM+F+RQKRAAKGG RRSL NG+L+R   A         A  +RGSERRR S+ MYV
Sbjct: 156  VTPLMDFVRQKRAAKGGSRRSLSNGKLSRR--AVGSSTGNRGASSKRGSERRRISSAMYV 213

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGAS---DXXXXXX 638
             RD     +GK+KS ++ V KRDD+ +S K      A+ + VL E  G S   +      
Sbjct: 214  LRDTVKNMSGKDKSMHLLVPKRDDERLSHKSVTVVPAARTEVLAEESGISGTNESGKKKF 273

Query: 637  XXXXXXXXXIPHLTXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQSR 458
                     I H++                   LK+NQQ + S RI++ IL+NKD+RQS+
Sbjct: 274  LLLKGKEREIFHVSGSLSKGITSSVGNTISSAALKQNQQHQGSERIVKRILLNKDSRQSQ 333

Query: 457  S-----EQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTR 293
            S     EQQ Q  N + D+RPPR  +   +LKD    PDDKV+G++ HGF SEKQ+KR+R
Sbjct: 334  SFVGLSEQQIQATNLEKDKRPPRPPHAQLVLKDPIPAPDDKVAGNNSHGFCSEKQEKRSR 393

Query: 292  NKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDV 113
            NKD+PDRGVWT LRR                     P DS EG+  + + D++N R  +V
Sbjct: 394  NKDKPDRGVWTSLRRSDGSHTSDESLSSSISQLSQSPVDSFEGSLGDTQVDMANARCGEV 453

Query: 112  KPIGSGRGGNFSVDNGSYKHGGRRGPSY 29
            K +G+GR  + S+DNGS+KH GRRGP++
Sbjct: 454  KNLGTGRTSHSSMDNGSHKHFGRRGPAH 481


>ref|XP_018811001.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Juglans regia]
          Length = 533

 Score =  329 bits (844), Expect = e-105
 Identities = 191/388 (49%), Positives = 242/388 (62%), Gaps = 8/388 (2%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGTI KDPEYLEF+E LAKPVENLPSAEIQLER+EAER G AKE  +
Sbjct: 96   QRVPKQWSKKDGREGTILKDPEYLEFLEYLAKPVENLPSAEIQLERREAERGGAAKEALV 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            +TPLM+F+RQKRAAKGG RRSL NG+L+R   A         A  +RGSERRR S+ MYV
Sbjct: 156  VTPLMDFVRQKRAAKGGSRRSLSNGKLSRR--AVGSSTGNRGASSKRGSERRRISSAMYV 213

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGAS---DXXXXXX 638
             RD     +GK+KS ++ V KRDD+ +S K      A+ + VL E  G S   +      
Sbjct: 214  LRDTVKNMSGKDKSMHLLVPKRDDERLSHKSVTVVPAARTEVLAEESGISGTNESGKKKF 273

Query: 637  XXXXXXXXXIPHLTXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQSR 458
                     I H++                   LK+NQQ + S RI++ IL+NKD+RQS+
Sbjct: 274  LLLKGKEREIFHVSGSLSKGITSSVGNTISSAALKQNQQHQGSERIVKRILLNKDSRQSQ 333

Query: 457  S-----EQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTR 293
            S     EQQ Q  N + D+RPPR  +   +LKD    PDDKV+G++ HGF SEKQ+KR+R
Sbjct: 334  SFVGLSEQQIQATNLEKDKRPPRPPHAQLVLKDPIPAPDDKVAGNNSHGFCSEKQEKRSR 393

Query: 292  NKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDV 113
            NKD+PDRGVWT LRR                     P DS EG+  + + D++N R  +V
Sbjct: 394  NKDKPDRGVWTSLRRSDGSHTSDESLSSSISQLSQSPVDSFEGSLGDTQVDMANARCGEV 453

Query: 112  KPIGSGRGGNFSVDNGSYKHGGRRGPSY 29
            K +G+GR  + S+DNGS+KH GRRGP++
Sbjct: 454  KNLGTGRTSHSSMDNGSHKHFGRRGPAH 481


>gb|OMO75152.1| Regulator of nonsense-mediated decay, UPF3 [Corchorus capsularis]
          Length = 500

 Score =  321 bits (822), Expect = e-102
 Identities = 188/382 (49%), Positives = 230/382 (60%), Gaps = 5/382 (1%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGTI KDPEYLEF+E LAKPVENLPSAEIQLERKEAERAG  K+ PI
Sbjct: 96   QRVPKQWSKKDGREGTIGKDPEYLEFLEFLAKPVENLPSAEIQLERKEAERAGVPKDTPI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            +TPLM+F+RQKRAAKGG RRSL NG+L+R  G          +  +RGSE+RR STTMYV
Sbjct: 156  VTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAGGSSGISPSSGS-SKRGSEKRRGSTTMYV 214

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGASDXXXXXXXXX 629
             RD+    +GK+KS Y+ V ++D+Q +S+KP G+  +     +    G +D         
Sbjct: 215  LRDSLKNASGKDKSAYILVSRKDEQQLSDKPVGTEISEEQSGVS---GITDAGKKKVLLL 271

Query: 628  XXXXXXIPHLTXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQS---- 461
                  I H+                        Q     GR+IR IL+NKDARQS    
Sbjct: 272  KGKEKDISHVAGSMLHQQNVTSPIKNILSSTPTKQNFRQEGRMIRGILLNKDARQSQLSG 331

Query: 460  -RSEQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTRNKD 284
             +SEQQ Q  N + DRRPPR+S+   +L+D+N   DDK  G+D HG   EK ++R RNKD
Sbjct: 332  VQSEQQIQASNLEKDRRPPRHSHAQFVLRDANGASDDKGGGNDFHGI--EKLERRGRNKD 389

Query: 283  RPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDVKPI 104
            RPDRGVWT LRR                    +P DS+EG   + K DLSNT    VK +
Sbjct: 390  RPDRGVWT-LRRSDGSHASDESLSSASSQSAQIPLDSSEGGYGDTKVDLSNTGSVQVKSV 448

Query: 103  GSGRGGNFSVDNGSYKHGGRRG 38
            G GR  N S+DNG +KH GRRG
Sbjct: 449  GGGR--NNSLDNGFHKHVGRRG 468


>ref|XP_023731231.1| regulator of nonsense transcripts UPF3-like [Lactuca sativa]
          Length = 467

 Score =  316 bits (810), Expect = e-101
 Identities = 206/391 (52%), Positives = 237/391 (60%), Gaps = 5/391 (1%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGTI KDPEYLEF+E ++KPVENLPSAEIQLERKEAERAG AKE PI
Sbjct: 96   QRVPKQWSKKDGREGTIGKDPEYLEFLESVSKPVENLPSAEIQLERKEAERAGAAKEAPI 155

Query: 988  ITPLMNFIRQKRAAKGGPR-RSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMY 812
            +TPLM+F+RQKRAAKGGPR RSL NG+L R  GA        S V +RGSE+R  S+TMY
Sbjct: 156  VTPLMDFVRQKRAAKGGPRQRSLPNGKLMRRNGA--SSSSSNSTVVKRGSEKR--SSTMY 211

Query: 811  VPRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDE---GWGASDXXXXX 641
            V R+ G   NGKEKSTYV   KR ++  SEK   SS  SGSVVLDE    +GASD     
Sbjct: 212  VLREGGKSTNGKEKSTYV---KRAERQASEKSPSSSTQSGSVVLDEEKGSFGASDTGKKK 268

Query: 640  XXXXXXXXXXIPHLTXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQS 461
                      IP++T                    ++NQ++EASGRIIRSIL+ KD+RQ 
Sbjct: 269  ILLLKGKEKEIPNVT---TGVTPQQKLLYGSGGGSRQNQRQEASGRIIRSILL-KDSRQH 324

Query: 460  RSEQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTRNKDR 281
            +SE QNQ  N+D DRRPPR  NV PL KDSN L DDK+      GFY EK DKR+RNK++
Sbjct: 325  QSE-QNQSLNQDKDRRPPRPQNVGPLSKDSNGLQDDKLQ----DGFYGEKMDKRSRNKEK 379

Query: 280  PDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDVKPIG 101
            PDRGVWTPLR                     + PDSAEG+                    
Sbjct: 380  PDRGVWTPLR----SHASDESLSSSTSQSTQLLPDSAEGS-------------------- 415

Query: 100  SGRGGNFSVDNGSYKHGG-RRGPSYNATKDA 11
                        SYKHGG RR  S+NA KDA
Sbjct: 416  ------------SYKHGGNRRTSSHNANKDA 434


>gb|PLY75844.1| hypothetical protein LSAT_9X119700 [Lactuca sativa]
          Length = 498

 Score =  316 bits (810), Expect = e-100
 Identities = 206/391 (52%), Positives = 237/391 (60%), Gaps = 5/391 (1%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPKQWSKKDGREGTI KDPEYLEF+E ++KPVENLPSAEIQLERKEAERAG AKE PI
Sbjct: 96   QRVPKQWSKKDGREGTIGKDPEYLEFLESVSKPVENLPSAEIQLERKEAERAGAAKEAPI 155

Query: 988  ITPLMNFIRQKRAAKGGPR-RSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMY 812
            +TPLM+F+RQKRAAKGGPR RSL NG+L R  GA        S V +RGSE+R  S+TMY
Sbjct: 156  VTPLMDFVRQKRAAKGGPRQRSLPNGKLMRRNGA--SSSSSNSTVVKRGSEKR--SSTMY 211

Query: 811  VPRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDE---GWGASDXXXXX 641
            V R+ G   NGKEKSTYV   KR ++  SEK   SS  SGSVVLDE    +GASD     
Sbjct: 212  VLREGGKSTNGKEKSTYV---KRAERQASEKSPSSSTQSGSVVLDEEKGSFGASDTGKKK 268

Query: 640  XXXXXXXXXXIPHLTXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQS 461
                      IP++T                    ++NQ++EASGRIIRSIL+ KD+RQ 
Sbjct: 269  ILLLKGKEKEIPNVT---TGVTPQQKLLYGSGGGSRQNQRQEASGRIIRSILL-KDSRQH 324

Query: 460  RSEQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKRTRNKDR 281
            +SE QNQ  N+D DRRPPR  NV PL KDSN L DDK+      GFY EK DKR+RNK++
Sbjct: 325  QSE-QNQSLNQDKDRRPPRPQNVGPLSKDSNGLQDDKLQ----DGFYGEKMDKRSRNKEK 379

Query: 280  PDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGWDVKPIG 101
            PDRGVWTPLR                     + PDSAEG+                    
Sbjct: 380  PDRGVWTPLR----SHASDESLSSSTSQSTQLLPDSAEGS-------------------- 415

Query: 100  SGRGGNFSVDNGSYKHGG-RRGPSYNATKDA 11
                        SYKHGG RR  S+NA KDA
Sbjct: 416  ------------SYKHGGNRRTSSHNANKDA 434


>ref|XP_021286730.1| regulator of nonsense transcripts UPF3 isoform X2 [Herrania
            umbratica]
          Length = 514

 Score =  310 bits (793), Expect = 8e-98
 Identities = 192/388 (49%), Positives = 242/388 (62%), Gaps = 11/388 (2%)
 Frame = -1

Query: 1168 QRVPKQWSKKDGREGTIDKDPEYLEFVELLAKPVENLPSAEIQLERKEAERAGTAKEGPI 989
            QRVPK  SKKDGREGTI KDPEYL+F+  LAKPVENLPSAEIQLERKEAERAG  K+ PI
Sbjct: 96   QRVPKLSSKKDGREGTILKDPEYLDFLGCLAKPVENLPSAEIQLERKEAERAGVPKDTPI 155

Query: 988  ITPLMNFIRQKRAAKGGPRRSLLNGRLARTIGAXXXXXXXXSAVPRRGSERRRASTTMYV 809
            +TPLM+F+RQKRAAKGG RRSL NG+L+R  G         +++ +RGSE+RR ST MYV
Sbjct: 156  VTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAGGSSGGTPGSASL-KRGSEKRRGSTAMYV 214

Query: 808  PRDNGIGRNGKEKSTYVQVHKRDDQLVSEKPEGSSAASGSVVLDEGWGA---SDXXXXXX 638
             RD+    +GK+KSTY+ V KRD+Q +S+K    +++ G+ + +E  G    +D      
Sbjct: 215  LRDSLKNASGKDKSTYILVSKRDEQQLSDKHVTLASSMGTEISEEESGVPGITDAGKKKV 274

Query: 637  XXXXXXXXXIPHL--TXXXXXXXXXXXXXXXXXXXLKKNQQREASGRIIRSILVNKDARQ 464
                     I H+  T                    K+N +RE  GR+IR IL+NKDARQ
Sbjct: 275  LLLKGKEKEISHVAGTMLYQQNVTSPIKNILGSTPTKQNSRRE--GRMIRGILLNKDARQ 332

Query: 463  S-----RSEQQNQVPNRDMDRRPPRYSNVPPLLKDSNSLPDDKVSGHDVHGFYSEKQDKR 299
            +     +S+QQ Q  N + DRRPPR+S+   +LKD+N+  DDKV G+D+HG  SEK ++R
Sbjct: 333  NQSSGVQSDQQIQTSNLEKDRRPPRHSHSHLVLKDTNTASDDKVVGNDLHG--SEKPERR 390

Query: 298  TRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXLVPPDSAEGTQKEGKYDLSNTRGW 119
            +RNKDRPDRGVWT LRR                    +P DS EG   + K DLSN R  
Sbjct: 391  SRNKDRPDRGVWT-LRRSDGSYASDESMSSSASQSPQIPLDSLEGAYGDVKVDLSNVRSV 449

Query: 118  DVKPIGSGRGGNFSVDNGSY-KHGGRRG 38
             VK  GSGR  N S+DNGS+ KH  RRG
Sbjct: 450  QVKTGGSGR--NSSLDNGSHNKHVSRRG 475