BLASTX nr result

ID: Chrysanthemum22_contig00004778 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00004778
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI00702.1| Zinc/iron permease [Cynara cardunculus var. scoly...    83   5e-16
gb|PLY88483.1| hypothetical protein LSAT_1X105840 [Lactuca sativa]     62   2e-08
ref|XP_023759892.1| putative zinc transporter At3g08650 [Lactuca...    62   2e-08

>gb|KVI00702.1| Zinc/iron permease [Cynara cardunculus var. scolymus]
          Length = 596

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = -2

Query: 154 YNSVTADVENNSSQRVITAPLKDTIGSVIDGNNLGEVFKSDMTTDELDG 8
           Y SVTAD ENN+SQR+ITAPLK+TIGSVIDG NLGEVFKSD  TDEL+G
Sbjct: 19  YGSVTADSENNTSQRLITAPLKETIGSVIDGTNLGEVFKSDTVTDELEG 67


>gb|PLY88483.1| hypothetical protein LSAT_1X105840 [Lactuca sativa]
          Length = 578

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
 Frame = -2

Query: 148 SVTADVENNSS--QRVITAPLKDTIGSVIDGNNLGEVFKSDMTTDELDGNK 2
           S T+D EN ++  +R+ITAPLKDTIGSVIDGNNLGEVF +    +ELDG K
Sbjct: 22  SATSDSENKTTTTERLITAPLKDTIGSVIDGNNLGEVFNT--INEELDGKK 70


>ref|XP_023759892.1| putative zinc transporter At3g08650 [Lactuca sativa]
          Length = 606

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
 Frame = -2

Query: 148 SVTADVENNSS--QRVITAPLKDTIGSVIDGNNLGEVFKSDMTTDELDGNK 2
           S T+D EN ++  +R+ITAPLKDTIGSVIDGNNLGEVF +    +ELDG K
Sbjct: 22  SATSDSENKTTTTERLITAPLKDTIGSVIDGNNLGEVFNT--INEELDGKK 70


Top