BLASTX nr result

ID: Chrysanthemum22_contig00004600 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00004600
         (1081 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021992808.1| replication protein A 70 kDa DNA-binding sub...    64   2e-07
gb|OTG07168.1| putative nucleic acid-binding, OB-fold protein [H...    64   2e-07
ref|XP_022039523.1| uncharacterized protein LOC110942111 [Helian...    61   2e-06
gb|OTG26543.1| putative nucleic acid-binding, OB-fold protein [H...    61   2e-06

>ref|XP_021992808.1| replication protein A 70 kDa DNA-binding subunit B-like [Helianthus
            annuus]
          Length = 504

 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 1/174 (0%)
 Frame = +2

Query: 500  CFRLAIADATGTLMLTCFSNEAHSIV-TECNKMILE*GHTDPYTLPPVLSALEGTTHLFQ 676
            C    IAD TGT  +T F    +S+V T C ++I++ G+TDPY +P  + A +G T  F 
Sbjct: 314  CLCATIADTTGTATVTLFDEAMNSLVQTRCEELIIQQGYTDPYVIPDKIEAFKGVTKTFH 373

Query: 677  LHFAPESTKENPVYILDTVMESGQQLLPPPENNAPVDVTDTQTANEVLYLTGPEDETQKG 856
            L F       +  YI++ V  S    +P  E NA            V  LT  ED  Q  
Sbjct: 374  LQFNNRPQSGSSQYIVNNV--SDHTNIPDEEKNA------------VTTLTVSEDPQQH- 418

Query: 857  TETGTSTETVPATPSSSSILPLPGTHAIQGTGKILEITPMATPPSAEGLQLPPS 1018
                     + +TP S +    P T A +     L I P++  P  + +  P S
Sbjct: 419  ---------MMSTPVSEAATISPITLA-EEQNDALTIPPVSDDPQQQTISTPVS 462


>gb|OTG07168.1| putative nucleic acid-binding, OB-fold protein [Helianthus annuus]
          Length = 538

 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 1/174 (0%)
 Frame = +2

Query: 500  CFRLAIADATGTLMLTCFSNEAHSIV-TECNKMILE*GHTDPYTLPPVLSALEGTTHLFQ 676
            C    IAD TGT  +T F    +S+V T C ++I++ G+TDPY +P  + A +G T  F 
Sbjct: 348  CLCATIADTTGTATVTLFDEAMNSLVQTRCEELIIQQGYTDPYVIPDKIEAFKGVTKTFH 407

Query: 677  LHFAPESTKENPVYILDTVMESGQQLLPPPENNAPVDVTDTQTANEVLYLTGPEDETQKG 856
            L F       +  YI++ V  S    +P  E NA            V  LT  ED  Q  
Sbjct: 408  LQFNNRPQSGSSQYIVNNV--SDHTNIPDEEKNA------------VTTLTVSEDPQQH- 452

Query: 857  TETGTSTETVPATPSSSSILPLPGTHAIQGTGKILEITPMATPPSAEGLQLPPS 1018
                     + +TP S +    P T A +     L I P++  P  + +  P S
Sbjct: 453  ---------MMSTPVSEAATISPITLA-EEQNDALTIPPVSDDPQQQTISTPVS 496


>ref|XP_022039523.1| uncharacterized protein LOC110942111 [Helianthus annuus]
          Length = 481

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
 Frame = +2

Query: 491 YSDCFRLAIADATGTLMLTCFSNEAHSIVT-ECNKMILE*GHTDPYTLPPVLSALEGTTH 667
           Y  C    IAD+TG   +T F     S++   CN+++++ G+TD  T P V S L G +H
Sbjct: 311 YLYCINCTIADSTGNATVTIFDIPFQSVIKIPCNELVIQQGYTDSMTTPDVFSKLLGVSH 370

Query: 668 LFQLHFAPESTKENPVYILDTVMESGQQLLPPPENNAPVDVTDTQTAN----EVLYLTGP 835
           +F+L F   +      ++ + V+E    +     N   V+ T T+ ++    E  + T P
Sbjct: 371 MFKLQFNDRAHTGFTQFVANEVLEYVPVMNEVAVNEVVVNPTITEVSDPADVENQHATQP 430

Query: 836 EDETQKGTETGTSTETVPATP 898
            +         T+ + VP TP
Sbjct: 431 LENPPTNVALETTVKQVPFTP 451


>gb|OTG26543.1| putative nucleic acid-binding, OB-fold protein [Helianthus annuus]
          Length = 555

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
 Frame = +2

Query: 491 YSDCFRLAIADATGTLMLTCFSNEAHSIVT-ECNKMILE*GHTDPYTLPPVLSALEGTTH 667
           Y  C    IAD+TG   +T F     S++   CN+++++ G+TD  T P V S L G +H
Sbjct: 385 YLYCINCTIADSTGNATVTIFDIPFQSVIKIPCNELVIQQGYTDSMTTPDVFSKLLGVSH 444

Query: 668 LFQLHFAPESTKENPVYILDTVMESGQQLLPPPENNAPVDVTDTQTAN----EVLYLTGP 835
           +F+L F   +      ++ + V+E    +     N   V+ T T+ ++    E  + T P
Sbjct: 445 MFKLQFNDRAHTGFTQFVANEVLEYVPVMNEVAVNEVVVNPTITEVSDPADVENQHATQP 504

Query: 836 EDETQKGTETGTSTETVPATP 898
            +         T+ + VP TP
Sbjct: 505 LENPPTNVALETTVKQVPFTP 525


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