BLASTX nr result

ID: Chrysanthemum22_contig00004402 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00004402
         (448 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023750851.1| uncharacterized protein LOC111899215 [Lactuc...    75   4e-13
gb|KVH77700.1| protein of unknown function DUF4408 [Cynara cardu...    74   1e-12

>ref|XP_023750851.1| uncharacterized protein LOC111899215 [Lactuca sativa]
 gb|PLY95277.1| hypothetical protein LSAT_5X47580 [Lactuca sativa]
          Length = 322

 Score = 75.1 bits (183), Expect = 4e-13
 Identities = 56/151 (37%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
 Frame = -3

Query: 392 SILTRLKSFTF--EXXXXXXXXXXXXHAQPIELAATQYVFNQPMHYQNFDFDQ------- 240
           SIL RLKSF F               H +P+++AATQYVFNQP+ YQ+FD+D        
Sbjct: 80  SILYRLKSFNFLPHRSQQDFSPEDDHHQEPLQVAATQYVFNQPIDYQHFDYDLDSTRSDH 139

Query: 239 -PSENITTHYDFDAKYSGADEFSGEFS------GEVQDFETEDTLLDSEPTHEEILGDNG 81
            P+ N      F A ++   E S  +S         Q  ET  +  D +PTH+EI  D G
Sbjct: 140 IPTGNANAAAQFSA-FNQTHEASIPYSETHVVWEHQQTVETRMSHFDFDPTHDEIRSDTG 198

Query: 80  LE--------DEFQTIDDVYSKLVDSKKSTK 12
            E        DE Q++D+VYSKL      TK
Sbjct: 199 FEDANEDEHADELQSLDEVYSKLKGGHDRTK 229


>gb|KVH77700.1| protein of unknown function DUF4408 [Cynara cardunculus var.
           scolymus]
          Length = 305

 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 55/141 (39%), Positives = 72/141 (51%), Gaps = 22/141 (15%)
 Frame = -3

Query: 392 SILTRLKSFTF--EXXXXXXXXXXXXHAQPIELAATQYVFNQPMHYQNFDFD-------- 243
           SIL RLKSF F  +            H QP+E+AATQYVFNQP+ Y++FDFD        
Sbjct: 76  SILHRLKSFNFYPQRPELEFSPDTHYHLQPLEVAATQYVFNQPIQYEHFDFDPTASDQVA 135

Query: 242 ---QPSENITTHYDFDAKYSGADEFSGEFSGEVQDFETEDTLLDSEPTHEEILGDNGLE- 75
              Q S    TH   +   SG +  +     + Q  ET     DS+PTH+EIL D   E 
Sbjct: 136 DVPQLSARNRTH---EVGLSGLE--THVVWEQQQSLETVMNHFDSDPTHQEILKDTDSEN 190

Query: 74  --------DEFQTIDDVYSKL 36
                   D+FQ++D+VYS+L
Sbjct: 191 AHEEEEQTDKFQSLDEVYSRL 211


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