BLASTX nr result
ID: Chrysanthemum22_contig00004222
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00004222
(4237 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OTG33036.1| putative ribonuclease H-like domain-containing pr... 1028 0.0
gb|PNX92874.1| copia protein [Trifolium pratense] 1024 0.0
gb|OTG02194.1| putative ribonuclease H-like domain-containing pr... 1022 0.0
gb|OTG22667.1| putative ribonuclease H-like domain-containing pr... 1016 0.0
gb|KYP66503.1| Retrovirus-related Pol polyprotein from transposo... 943 0.0
gb|KZV24566.1| hypothetical protein F511_39264 [Dorcoceras hygro... 899 0.0
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza... 906 0.0
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat... 870 0.0
gb|OTG05826.1| putative serine/threonine-protein kinase, active ... 841 0.0
gb|PNY14825.1| hypothetical protein L195_g011512 [Trifolium prat... 781 0.0
gb|OTF91857.1| putative ribonuclease H-like domain, Reverse tran... 776 0.0
gb|PRQ42184.1| putative RNA-directed DNA polymerase [Rosa chinen... 764 0.0
gb|KYP64614.1| Retrovirus-related Pol polyprotein from transposo... 757 0.0
emb|CCH50966.1| T4.5 [Malus x robusta] 754 0.0
gb|OTG14868.1| putative zinc finger, CCHC-type [Helianthus annuus] 744 0.0
gb|PKU63244.1| Retrovirus-related Pol polyprotein from transposo... 721 0.0
gb|PKU68501.1| Retrovirus-related Pol polyprotein from transposo... 720 0.0
gb|PNX84476.1| hypothetical protein L195_g040537 [Trifolium prat... 701 0.0
gb|PKU65522.1| Retrovirus-related Pol polyprotein from transposo... 730 0.0
gb|PKU86178.1| Retrovirus-related Pol polyprotein from transposo... 718 0.0
>gb|OTG33036.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1430
Score = 1028 bits (2658), Expect = 0.0
Identities = 527/931 (56%), Positives = 634/931 (68%), Gaps = 15/931 (1%)
Frame = -1
Query: 2749 DPFGFSVKDFLTRWVLLRCDSTGDLYPVTQQSSTHPPFALLSFSYTTWHRRLGHPGEDVL 2570
DPFGFSVKD+ T +L R DS LYPVT P + +WH RLGHPG V+
Sbjct: 463 DPFGFSVKDYKTGRMLSRHDSDSHLYPVTAPVQVSKPSVFTVSTPESWHDRLGHPGASVV 522
Query: 2569 RRLESSNSISCNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVWTSPIPSES 2390
L S+ I CNK+ C++C + K +LPF S S FDIVH D+WTSPI S +
Sbjct: 523 DFLSSNKFIDCNKTS-RMFCNSCHIAKHKRLPFALSNSTTILPFDIVHCDLWTSPIVSNT 581
Query: 2389 GFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEYDNT 2210
G+KYY I +D +++F W++PL KS+ KF+ F Y+ QF + IK+ QCD+GGE+DNT
Sbjct: 582 GYKYYMILIDDYTNFAWLFPLRFKSETVTKFLKFHTYIKTQFNLSIKSFQCDNGGEFDNT 641
Query: 2209 RFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALNMAA 2030
F + T GI FRFSCPHTSQQNGK+ERM L AS+PP+YWVEA + A
Sbjct: 642 TFKNLAATHGIHFRFSCPHTSQQNGKAERMIRRINEIMLSLLTHASVPPTYWVEAAHTAV 701
Query: 2029 YLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYITVA--HKLQPRSTACVFLG 1856
YL NILP+ +NN P + LY P+YD+L+VFGCLCYP T HKL RST CVFLG
Sbjct: 702 YLHNILPTKLLNNHTPTSALYLRHPAYDHLKVFGCLCYPNQTATRPHKLSHRSTPCVFLG 761
Query: 1855 YPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHYDFLNTTNTIPLPVHPT 1676
YP +HRG+RCL+L + + I+SRHV F+E FPF S Q TS + + +TI H
Sbjct: 762 YPPDHRGYRCLNLQTGQTIISRHVTFNESSFPF-STSQPTSDYSLLESDLSTIFTHPHNF 820
Query: 1675 PAVINEXXXXXXXXXXXXXTDLHEPLPQ-------PASPNQHT--SSPPSVAQSLPTPQA 1523
P T H P P P+S N +T S PPS +Q
Sbjct: 821 PT------SDPHPPTSPQHTSAHSPTPTSPTPTTGPSSSNHYTGPSLPPSPSQHSNHNSH 874
Query: 1522 DXXXXXXXXXXXXXXXXXXXXXPMVTRAKAGISKPLERMNCHVTT---VSPLPRSHIQAL 1352
PM TR KAGI+KP +N H TT VSPLP+SHI A
Sbjct: 875 PSSSDQNHPLNQTVQPQPTSSHPMTTRLKAGITKPKIHLNLHATTSPTVSPLPKSHIDAQ 934
Query: 1351 RVPHWKQAMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARLVAN 1172
P+W AM DEY+ALI N TW LVPRP +I+R MWLFRHKFHA+GTL RYKARLV N
Sbjct: 935 SDPNWHMAMNDEYSALIENNTWELVPRPDGAHIIRCMWLFRHKFHANGTLQRYKARLVVN 994
Query: 1171 GRSQQQGIDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYMHQP 992
G+SQQ G+DC +TFSPVVKP TIRTVLS+AVSR WPIHQLDVKNAFLHGDL+ETVYM QP
Sbjct: 995 GKSQQVGVDCFDTFSPVVKPTTIRTVLSIAVSRTWPIHQLDVKNAFLHGDLNETVYMFQP 1054
Query: 991 PGFVDPAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRGSDT 812
PG+VD +P YVC L++SLYGLKQAPRAW+ RFA F+T+ GF + D SLFV+ + S
Sbjct: 1055 PGYVDQTNPSYVCRLRKSLYGLKQAPRAWYHRFATFITKCGFHSTSCDTSLFVYRKDSRV 1114
Query: 811 AYLLLYVDDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSGMFLSQSK 632
AYLLLYVDDII TAS +FL +I +L EFAMTDLG+L++FLGI TR+ G+ LSQ
Sbjct: 1115 AYLLLYVDDII-TASDDSFLHEIIASLSKEFAMTDLGNLHHFLGIQVTRSQDGLRLSQEA 1173
Query: 631 FAEEILERAHMQKCNPCRTPVDTESKLGPD-GTPFDDPTLYRSLAGALQYLTFTRPDISY 455
+ +IL RA+M C PC TP DT+SKL + GTP DPTLYRSLAGALQYLTFTRPDI+Y
Sbjct: 1174 YINDILARANMSSCKPCHTPCDTDSKLSANSGTPMSDPTLYRSLAGALQYLTFTRPDIAY 1233
Query: 454 AVQQVCLYMHDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDADWAGCPVTR 275
AVQQVCL+MHDPR+ HF+ LKRILR+L+GT H L + S + +L AY+DADW GCP +R
Sbjct: 1234 AVQQVCLFMHDPREPHFNYLKRILRFLKGTSTHALHIKPSKSLKLTAYSDADWGGCPDSR 1293
Query: 274 RSTSGYCVFLGDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWIRNLLRELHHPLST 95
RSTSGYCVFLGDNL+SWS+KRQ T+SRSSAEAEYRGVAN AET+W+RNLL ELH P
Sbjct: 1294 RSTSGYCVFLGDNLVSWSSKRQQTVSRSSAEAEYRGVANATAETSWLRNLLLELHIPTRE 1353
Query: 94 ATIVYCDNVSAVYLSTNPVQHQRTKHIEIDI 2
A+I++CDNVSAVYLS NPVQHQRTKH+EIDI
Sbjct: 1354 ASIIFCDNVSAVYLSDNPVQHQRTKHVEIDI 1384
Score = 85.9 bits (211), Expect = 7e-13
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 6/221 (2%)
Frame = -3
Query: 3488 LDVDEMNYSSWVYYFSHLCHGYGILDHLVDXXXXXXXXXXXXXTKDLEWLKVDFIIRSWI 3309
LD ++ YSSWV F GY +L+H+ +W +VD I+ WI
Sbjct: 32 LDGTKVTYSSWVKLFQLHARGYKVLNHIDGTLPPATTDPSYE-----QWAEVDAIVLQWI 86
Query: 3308 FSMLASNLQKRLVVLNPQ-TAKEVWVYLETIFQDNKRPRAMALKAELRNLKLGDL-TVDA 3135
+ L+ L R VL P+ TA + WV + +F +NK RA AL+ NL L + ++ A
Sbjct: 87 YGSLSDELLVR--VLEPESTALQAWVRIRNLFLNNKGSRAAALEHAFTNLTLKSMPSLQA 144
Query: 3134 YFQKIELIASVLNGLGSPLSNDNIVTFALQGLPNTYDVISTVIASREPFPDLKTVRSLLT 2955
Y Q+++ +A L+ + SP+S +V ++GLP+ YD ++ + + P + ++L
Sbjct: 145 YCQRLKELADQLSDVDSPVSASRLVIQLVRGLPSEYDTVAAQL--NQSIPSWEEAVNMLE 202
Query: 2954 TQEMCMKSK-VQDPLVDATSASLMVLLA---NNNARRPSNP 2844
+E ++ ++P+ A + LA RR NP
Sbjct: 203 LEEQRQANREKENPIAAAVTPDANPPLAAPEPQPQRRTQNP 243
>gb|PNX92874.1| copia protein [Trifolium pratense]
Length = 1424
Score = 1024 bits (2648), Expect = 0.0
Identities = 527/930 (56%), Positives = 635/930 (68%), Gaps = 14/930 (1%)
Frame = -1
Query: 2749 DPFGFSVKDFLTRWVLLRCDSTGDLYPVTQQSSTHPPFALLSFSYTTWHRRLGHPGEDVL 2570
DPFGFSV DF T L+RC+S GDLYPVT S++H FA LS WH RLGHP L
Sbjct: 459 DPFGFSVFDFQTGTPLMRCNSFGDLYPVT--SASH--FAGLSSGL--WHSRLGHPSSSTL 512
Query: 2569 RRLESSNSISCNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVWTSPIPSES 2390
+ L + IS +C++C GK IKLPF +S++ FDI+HSD+WTSPI S S
Sbjct: 513 QSLHKNKFISGEHLSSKTICNSCVFGKHIKLPFDSSKNVTLMPFDILHSDIWTSPILSSS 572
Query: 2389 GFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEYDNT 2210
G +YY +FLD +S F+W +P+ KS ++ F + QF +K QCD+G EY+NT
Sbjct: 573 GHRYYXLFLDDYSDFLWTFPISNKSQAFEMFTSLSNQIRTQFSQTVKCFQCDNGREYNNT 632
Query: 2209 RFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALNMAA 2030
FH + G+ FRFSCPHTS QNGK+ER L +S+PPS+W AL MA
Sbjct: 633 LFHKYCVDNGLIFRFSCPHTSSQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMAT 692
Query: 2029 YLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYI--TVAHKLQPRSTACVFLG 1856
YL NILP ++N P LY+ PSY +LRVFGCLCYP T +KLQPRST CVFLG
Sbjct: 693 YLLNILPRKNLSNHSPTQLLYHRDPSYTHLRVFGCLCYPLFPSTTINKLQPRSTPCVFLG 752
Query: 1855 YPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHYDFLNTTNTIPLPVHPT 1676
YP NHRG++C DLS KII+SRHV FDE FPFA + YD +HP+
Sbjct: 753 YPTNHRGYKCFDLSQRKIIISRHVIFDETKFPFAHMSSQPLTTYDHFTDD------LHPS 806
Query: 1675 PAVINEXXXXXXXXXXXXXTDLHEPLPQPASPN-------QHTSSPPSVAQSLPTPQADX 1517
++++ P+P P S + HTSS +++ SLPT D
Sbjct: 807 --LVHQWTNPTLQSPLDDLPSSSPPVPNPPSTSPARPHNPSHTSSNTTISSSLPTSTPDT 864
Query: 1516 XXXXXXXXXXXXXXXXXXXXPMVTRAKAGISKPLERMNCHVT----TVSPLPRSHIQALR 1349
M TR+ GI KP + N VT T+SPLP++ AL
Sbjct: 865 SPPPTPLAQPAPPTRT-----MATRSMQGIYKPRKLFNLSVTIDDPTISPLPKNPKLALS 919
Query: 1348 VPHWKQAMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARLVANG 1169
P+WK AM E+NALI N TW LVPRP +VNI+R MW+FRHK ++G RYKARLV +G
Sbjct: 920 DPNWKAAMQSEFNALIKNNTWDLVPRPCDVNIIRCMWIFRHKKKSNGCFERYKARLVGDG 979
Query: 1168 RSQQQGIDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYMHQPP 989
RSQ G+DCDETFSPVVKPATIRTVL++A+S+ W IHQLDV+NAFLHGDL ETVYMHQP
Sbjct: 980 RSQIAGVDCDETFSPVVKPATIRTVLTIALSKSWHIHQLDVQNAFLHGDLHETVYMHQPL 1039
Query: 988 GFVDPAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRGSDTA 809
GF DP HPDYVC L++SLYGLKQAPRAW+QRFA FV+ IGF+HS +D SLF++ GS+ A
Sbjct: 1040 GFRDPHHPDYVCRLRKSLYGLKQAPRAWYQRFADFVSTIGFEHSTSDHSLFIYRHGSNLA 1099
Query: 808 YLLLYVDDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSGMFLSQSKF 629
Y+LLYVDDIIL S+ + ++T L EFAM DLG L+YFLGI+ TR SG+FLSQS +
Sbjct: 1100 YILLYVDDIILITSTHDLRKSIMTLLASEFAMKDLGPLSYFLGIAVTRHASGLFLSQSTY 1159
Query: 628 AEEILERAHMQKCNPCRTPVDTESKLGPD-GTPFDDPTLYRSLAGALQYLTFTRPDISYA 452
A EI+ RA M C P TPVDT+ KLG GTP+DDPTLYRSLAGALQYLTFTRPDISYA
Sbjct: 1160 AGEIIARAGMASCKPSATPVDTKQKLGTSAGTPYDDPTLYRSLAGALQYLTFTRPDISYA 1219
Query: 451 VQQVCLYMHDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDADWAGCPVTRR 272
VQQVCL+MH P H ALKRILRY++GTL +GL L+ S +L++YTDADW GCP TRR
Sbjct: 1220 VQQVCLHMHAPCTDHMLALKRILRYIQGTLHYGLHLYPSPIEKLVSYTDADWGGCPDTRR 1279
Query: 271 STSGYCVFLGDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWIRNLLRELHHPLSTA 92
STSGYCVFLGDNL+SWS+KRQ TLSRSSAEAEYRGVANVV+E+ W+RNLL ELH PLS A
Sbjct: 1280 STSGYCVFLGDNLISWSSKRQPTLSRSSAEAEYRGVANVVSESCWLRNLLLELHFPLSQA 1339
Query: 91 TIVYCDNVSAVYLSTNPVQHQRTKHIEIDI 2
T+VYCDNVSA+YLS NPVQHQRTKHIE+DI
Sbjct: 1340 TLVYCDNVSAIYLSGNPVQHQRTKHIEMDI 1369
Score = 83.6 bits (205), Expect = 3e-12
Identities = 47/195 (24%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
Frame = -3
Query: 3527 MAMNHLTTFVPIKLDVDEMNYSSWVYYFSHLCHGYGILDHLVDXXXXXXXXXXXXXTKDL 3348
+A+ ++ +P L++++ +Y+ W F + ++ H++ +
Sbjct: 30 LAVTNIKHSIPFVLELEKDHYNMWAELFEVHARAHKVIHHIIPQPGKEKPASTDASFE-- 87
Query: 3347 EWLKVDFIIRSWIFSMLASNLQKRLVVLNPQTAKEVWVYLETIFQDNKRPRAMALKAELR 3168
W +D + WI+S ++ +L ++ TA W L IF+DN+ RA+AL+ +
Sbjct: 88 MWTILDSTVLQWIYSTISFDLLTTIMEKG-STAMATWNRLANIFEDNQNSRAVALEQDFS 146
Query: 3167 NLKLGDL-TVDAYFQKIELIASVLNGLGSPLSNDNIVTFALQGLPNTYDVISTVIASREP 2991
+ ++ D V AY Q+++ ++ L +G+P+S +V + GL Y ++TVI ++
Sbjct: 147 STRMEDFPNVSAYCQRLKQLSDQLKNVGAPVSEHRLVLQIVSGLSEPYRGVATVIRQQKT 206
Query: 2990 FPDLKTVRSLLTTQE 2946
P RS+LT +E
Sbjct: 207 LPSFLEARSMLTLEE 221
>gb|OTG02194.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1735
Score = 1022 bits (2643), Expect = 0.0
Identities = 517/938 (55%), Positives = 635/938 (67%), Gaps = 22/938 (2%)
Frame = -1
Query: 2749 DPFGFSVKDFLTRWVLLRCDSTGDLYPVTQQSSTHPPFALLSFSYTTWHRRLGHPGEDVL 2570
DPFGFSVKD+ +L R DS G LYP + +S FA+ S WH RLGHPG V
Sbjct: 395 DPFGFSVKDYTDGKILTRQDSDGPLYPFSNIASV---FAI-SQEQDFWHDRLGHPGLPVF 450
Query: 2569 RRLESSNSISCNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVWTSPIPSES 2390
L S+ I CNK +++C +CQ+ K +LPF TS S FDI+H D+WTSPI S++
Sbjct: 451 DFLSSNKLIPCNKRSRTSVCSSCQISKHKRLPFATSLSNSVLPFDIIHCDLWTSPILSKN 510
Query: 2389 GFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEYDNT 2210
G+KYY + +D + F W+YPL KS+ +DKF+ F ++ QF +IK CD GGE+DN
Sbjct: 511 GYKYYMVLIDDKTQFAWIYPLKFKSETFDKFVQFHKFIQTQFHTNIKVFHCDLGGEFDNH 570
Query: 2209 RFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALNMAA 2030
F +F G+QFRF+CP TSQQNGKSERM L AS+PP WVEA++ A
Sbjct: 571 HFKNFATNKGLQFRFACPQTSQQNGKSERMIRRLNEIMLTLLKHASLPPDLWVEAVHTAT 630
Query: 2029 YLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYITVA--HKLQPRSTACVFLG 1856
YL NILP+ ++N P LY P+Y++LRVFG +CYP + HKL R+ CVFLG
Sbjct: 631 YLHNILPTKLLHNLTPTAALYRRHPTYEHLRVFGSVCYPNTSATRPHKLAERAVKCVFLG 690
Query: 1855 YPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHYDFLNTTNTIPL----- 1691
YP + RG+RCLDLS+ K ++SRHV FDE FPF +T Y L T T L
Sbjct: 691 YPPDFRGYRCLDLSTGKTLISRHVTFDESSFPFQHKRDHTQTDYSSLETEPTPTLFQQPS 750
Query: 1690 ---PVHPT--PAVINEXXXXXXXXXXXXXTDLHEPLP------QPASPNQHTSSPPS--- 1553
PVH P+ ++ + H PLP QP + H+S+P S
Sbjct: 751 VYDPVHQAQHPSHLDHPSCHTPTTSPIRNLNTHSPLPTSPHNIQPQTSPCHSSAPTSNTY 810
Query: 1552 VAQSLPTPQADXXXXXXXXXXXXXXXXXXXXXPMVTRAKAGISKPLERMNCHVTTVSPLP 1373
A + P PMVTR++ GI+KP + H T+++P+P
Sbjct: 811 CASTSTYPNQTNNSTTLPSEPTDPSPIPHQHHPMVTRSQLGITKPKIPFSLHTTSITPIP 870
Query: 1372 RSHIQALRVPHWKQAMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRY 1193
+SH+ AL P+W AM DEYNAL+ N TW LVPRP +++R MWLFRHKF+ +GTL RY
Sbjct: 871 KSHLSALSDPNWNAAMQDEYNALMKNETWDLVPRPSTAHVIRCMWLFRHKFNENGTLQRY 930
Query: 1192 KARLVANGRSQQQGIDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSE 1013
KARLV NG++QQ GIDCD+TFSPVVKP TIRTVLSLA SR WPIHQLDVKNAFLHGDL E
Sbjct: 931 KARLVVNGKTQQVGIDCDDTFSPVVKPTTIRTVLSLATSRAWPIHQLDVKNAFLHGDLQE 990
Query: 1012 TVYMHQPPGFVDPAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFV 833
TVYM QPPGF + HPDYVC L++SLYGLKQAPRAW+QRFA ++T+ GF+ + +D SLFV
Sbjct: 991 TVYMFQPPGFKNSGHPDYVCKLKKSLYGLKQAPRAWYQRFANYITKCGFKSAVSDTSLFV 1050
Query: 832 FHRGSDTAYLLLYVDDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSG 653
+ +G+ AYLLLYVDDIILTAS+ L+ +I +L EFAMTDLG L++FLGIS RT
Sbjct: 1051 YKKGNQLAYLLLYVDDIILTASNDNLLRGIINSLSKEFAMTDLGLLHHFLGISVKRTNGT 1110
Query: 652 MFLSQSKFAEEILERAHMQKCNPCRTPVDTESKL-GPDGTPFDDPTLYRSLAGALQYLTF 476
+FLSQ +A++IL RA+M C P TPVDT SKL G D TLYRSLAGALQYLTF
Sbjct: 1111 LFLSQEAYAKDILSRANMSSCKPSATPVDTSSKLSATTGNLLSDGTLYRSLAGALQYLTF 1170
Query: 475 TRPDISYAVQQVCLYMHDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDADW 296
TRPDISYAVQQ+CL+MH PR+ HF LKR+LRY+RGT HGL +H S T L AY+DADW
Sbjct: 1171 TRPDISYAVQQICLFMHAPREPHFQFLKRVLRYVRGTTHHGLHIHPSKTISLTAYSDADW 1230
Query: 295 AGCPVTRRSTSGYCVFLGDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWIRNLLRE 116
GCP TRRSTSGYC+FLG+NL+SWS+KRQ T+SRSSAEAEYRGVAN VAET+WIRNLL E
Sbjct: 1231 GGCPDTRRSTSGYCIFLGNNLISWSSKRQATISRSSAEAEYRGVANTVAETSWIRNLLLE 1290
Query: 115 LHHPLSTATIVYCDNVSAVYLSTNPVQHQRTKHIEIDI 2
L P+ AT+VYCDN+SAVYLS NPVQHQRTKH+EIDI
Sbjct: 1291 LSVPIPQATVVYCDNISAVYLSENPVQHQRTKHVEIDI 1328
Score = 94.7 bits (234), Expect = 1e-15
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Frame = -3
Query: 3488 LDVDEMNYSSWVYYFSHLCHGYGILDHLVDXXXXXXXXXXXXXTKDLEWLKVDFIIRSWI 3309
LD ++YSSWV F GY +LDH+ WLK+D I+ WI
Sbjct: 32 LDGKNVSYSSWVKLFQLHARGYEVLDHIDGTEAPAKADPNYD-----SWLKIDSIVLQWI 86
Query: 3308 FSMLASNLQKRLVVLNPQTAKEVWVYLETIFQDNKRPRAMALKAELRNLKLGDL-TVDAY 3132
+ L+ +L R V+ TA E W ++ IF +NK RA L+ E NL L + +++AY
Sbjct: 87 YGTLSDDLLVR-VLETESTALEAWNRIKKIFLNNKGARAATLEQEFTNLHLRSMPSLEAY 145
Query: 3131 FQKIELIASVLNGLGSPLSNDNIVTFALQGLPNTYDVISTVIASREPFPDLKTVRSLLTT 2952
Q+++ ++ L + SP++ +V ++GLP YD + + I + P T S+L
Sbjct: 146 CQRLKELSDQLADVDSPMTEQRLVLQLVRGLPIEYDTVGSYI--NQSLPSWDTACSMLQL 203
Query: 2951 QEMCMKSKVQDPLVDATSASLMVLLANNNARRPSN 2847
+ ++ P A + + NN RR SN
Sbjct: 204 EHHRQHARENPPTPPAPVVAAVDTPPNNPNRRTSN 238
>gb|OTG22667.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1336
Score = 1016 bits (2627), Expect = 0.0
Identities = 519/934 (55%), Positives = 640/934 (68%), Gaps = 18/934 (1%)
Frame = -1
Query: 2749 DPFGFSVKDFLTRWVLLRCDSTGDLYPVTQQSSTHPPFALLSFSYTTWHRRLGHPGEDVL 2570
DP+GFSVKDF +L R +ST DLYP+T +S FA S+ WH RLGHPG+ +
Sbjct: 367 DPYGFSVKDFKDGTILSRHNSTSDLYPLTPNASATACFAATQDSFF-WHHRLGHPGQPTM 425
Query: 2569 RRLESSNSISCNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVWTSPIPSES 2390
L +N ISCNK + S+LCHACQL K +LPF S ++ F ++H D+WTSP+ S +
Sbjct: 426 DYLRLNNFISCNKQRASSLCHACQLSKHKRLPFFDSVTQTLCHFSLLHCDLWTSPVLSHA 485
Query: 2389 GFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEYDNT 2210
+KYY + +D F+ + WVYPL KS+ + K F +V+ QF + I+A+QCD GGE+DNT
Sbjct: 486 SYKYYLVIIDDFTQYTWVYPLRFKSETFSKITHFHQFVSTQFRLPIQAIQCDMGGEFDNT 545
Query: 2209 RFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALNMAA 2030
FH F GIQ RFSCPHTSQQNGK+ERM L AS+P SYWVEAL+ A+
Sbjct: 546 NFHTFTSQNGIQLRFSCPHTSQQNGKAERMIRRLNEIMFTLLTHASLPSSYWVEALHTAS 605
Query: 2029 YLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYITVA--HKLQPRSTACVFLG 1856
YL NILP+ N P + LY PSYD+LRVFG LCYP + +KL R++ C+FLG
Sbjct: 606 YLHNILPTKTHQNRTPLSLLYLREPSYDHLRVFGSLCYPNTSATRPNKLTHRASPCLFLG 665
Query: 1855 YPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASL------HQYTSPHYDFLNTTN-TI 1697
YPAN+RG+RCLDL+S K I SRHV FDE VFP A+ H + P+ + T
Sbjct: 666 YPANYRGYRCLDLASGKTIFSRHVTFDEGVFPHANPSTPRPDHSFLDPNPLLFDPTQFAS 725
Query: 1696 PLPVHPTPAVINEXXXXXXXXXXXXXTDLHEPLPQPASPNQHT--SSPP--SVAQSLPTP 1529
P VHP A P P P++ +Q + ++PP S AQ P+P
Sbjct: 726 PPTVHPPSAQ-------------------QHPSPLPSAQHQTSPFTTPPAQSEAQQPPSP 766
Query: 1528 QADXXXXXXXXXXXXXXXXXXXXXPMVTRAKAGISKPLERMNCHV----TTVSPLPRSHI 1361
A PM TR++AGI KP + H TT SPLP+SH+
Sbjct: 767 TAPNHQPPTPPAATQPSNTSQPTHPMQTRSRAGIFKPKIPFSLHTQTTPTTPSPLPKSHL 826
Query: 1360 QALRVPHWKQAMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARL 1181
AL P+WK AM+DEY AL+ N TW LVPRPP+ ++R MWLF+HKFHADG+L R+KARL
Sbjct: 827 TALTDPNWKIAMVDEYEALLANHTWELVPRPPDAPVIRCMWLFKHKFHADGSLERHKARL 886
Query: 1180 VANGRSQQQGIDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYM 1001
V NG+SQ GIDCDETFSPVVKP TIRTVLSLAVSR W +HQLDVKNAFLHG+L ETVYM
Sbjct: 887 VVNGKSQTVGIDCDETFSPVVKPTTIRTVLSLAVSRGWSMHQLDVKNAFLHGNLKETVYM 946
Query: 1000 HQPPGFVDPAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRG 821
QPPGF +P +VC L +SLYGLKQAPRAW+QRFAG++ + GF+ S D SLF++HRG
Sbjct: 947 FQPPGFTSTTYPKHVCKLNKSLYGLKQAPRAWYQRFAGYLLKCGFKGSLCDTSLFIYHRG 1006
Query: 820 SDTAYLLLYVDDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSGMFLS 641
+ AYLLLYVDDIILTASS T LQ++I +L EF M DLGSL++FLGI+ T+ SG+ LS
Sbjct: 1007 NQMAYLLLYVDDIILTASSDTLLQQIIKSLTAEFKMIDLGSLHHFLGIAVTKQASGVLLS 1066
Query: 640 QSKFAEEILERAHMQKCNPCRTPVDTESKLGPD-GTPFDDPTLYRSLAGALQYLTFTRPD 464
QS +A +IL RA M C P TPV+ SKL D G+ F+D +LYRSLAGALQYLT TRPD
Sbjct: 1067 QSTYAADILSRAKMSNCKPASTPVEAGSKLSADSGSVFEDGSLYRSLAGALQYLTITRPD 1126
Query: 463 ISYAVQQVCLYMHDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDADWAGCP 284
I+Y VQQVCL+MH PR+ HF LKRILRY++GTL GL L SS+ L AY+DADW GCP
Sbjct: 1127 IAYVVQQVCLFMHAPREPHFQFLKRILRYIQGTLHQGLLLSPSSSTALTAYSDADWGGCP 1186
Query: 283 VTRRSTSGYCVFLGDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWIRNLLRELHHP 104
+RRSTSGYCV+LG NL+SWS+KRQ T+SRSSAEAEYR VAN VAE +W+RNLL EL P
Sbjct: 1187 DSRRSTSGYCVYLGPNLISWSSKRQSTISRSSAEAEYRAVANTVAELSWVRNLLLELQVP 1246
Query: 103 LSTATIVYCDNVSAVYLSTNPVQHQRTKHIEIDI 2
+ A+++YCDN+SAVYL+ NPV HQRTKHIE+DI
Sbjct: 1247 VRHASLIYCDNISAVYLAENPVNHQRTKHIELDI 1280
Score = 90.1 bits (222), Expect = 3e-14
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Frame = -3
Query: 3488 LDVDEMNYSSWVYYFSHLCHGYGILDHLVDXXXXXXXXXXXXXTKDLEWLKVDFIIRSWI 3309
LD ++Y+SWV F+ GY +L H+ EW +D I+ WI
Sbjct: 35 LDGTNVSYASWVKLFTLHAKGYKVLCHIDGTPSPGKDTPDFA-----EWENIDSIVLQWI 89
Query: 3308 FSMLASNLQKRLVVLNPQTAKEVWVYLETIFQDNKRPRAMALKAELRNLKLGDL-TVDAY 3132
+ L+ L R V+ + TA E W+ ++ +F +NK PR+ AL+ EL N L + ++AY
Sbjct: 90 YGTLSDALLVR-VLTDESTAHEAWLRVKRLFVNNKGPRSQALQHELANTTLASMPNLEAY 148
Query: 3131 FQKIELIASVLNGLGSPLSNDNIVTFALQGLPNTYDVISTVIASREP 2991
QKI + LN L P+++ V ++GLP YD IS+++ + P
Sbjct: 149 CQKIRDLTDQLNALDFPMNDQQRVLHLVKGLPKEYDTISSILNNSLP 195
>gb|KYP66503.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1356
Score = 943 bits (2437), Expect = 0.0
Identities = 486/895 (54%), Positives = 597/895 (66%), Gaps = 23/895 (2%)
Frame = -1
Query: 2749 DPFGFSVKDFLTRWVLLRCDSTGDLYPV--TQQSSTHPPFALLSFSYTTWHRRLGHPGED 2576
DPFGFSV D T L+RC+S GDLYP+ Q++ P + S WH RLGHPG
Sbjct: 458 DPFGFSVHDLQTGTKLMRCNSVGDLYPLFPPSQATLSNPSVFTTMSRDIWHNRLGHPGNA 517
Query: 2575 VLRRLESSNSISCNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVWTSPIPS 2396
++ L S+ I CNK+ + C +C +GK +KLPF+ S S FDI+HSD+WTSPI S
Sbjct: 518 IINSLRSNKFIECNKA-CQSFCSSCPIGKHVKLPFYDSSSYTVLPFDIIHSDLWTSPIAS 576
Query: 2395 ESGFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEYD 2216
SG +YY +FLD +S F+W +P+ +KS + F+ F A V QF IK QCD+G EY
Sbjct: 577 TSGHRYYILFLDDYSKFLWTFPIAKKSQVPHLFLSFHALVKTQFERSIKTFQCDNGTEYV 636
Query: 2215 NTRFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALNM 2036
N FF G+ +R SCPHTS QNGK+ER L AS+P S+W AL+M
Sbjct: 637 NGTLKQFFDHNGLLYRLSCPHTSPQNGKAERHIRSINNIIRTILHHASMPLSFWHHALSM 696
Query: 2035 AAYLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYI--TVAHKLQPRSTACVF 1862
A YL NILPS +N P LY +PSY +LR FGCLC+P T +KLQ RST CV+
Sbjct: 697 ATYLLNILPSKVLNYLSPTQILYQGNPSYSDLRTFGCLCFPLFPSTTINKLQERSTPCVY 756
Query: 1861 LGYPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHYDFLNTT-------- 1706
LG NHRG +C ++SS KII+ RHVRF E+ FPF+ +H+ +D + +
Sbjct: 757 LGPAPNHRGSKCYEISSGKIIICRHVRFVENEFPFSKVHKPKETDFDCFDASLPYFIHQK 816
Query: 1705 --NTIPLPVHPTPAVINEXXXXXXXXXXXXXTDLHEPLPQPASPNQHTSSPPSVA--QSL 1538
NTIP P+ ++L PL QP S Q SSPPS + +
Sbjct: 817 PQNTIPNPLPQNTQTAQSSSPSTSSRVNLASSNLPSPLSQPTSSTQTHSSPPSSRNIEEI 876
Query: 1537 PTPQADXXXXXXXXXXXXXXXXXXXXXPMVT-RAKAGISKPLERM--NCHVTT---VSPL 1376
P A +T R+ GI KP + N H T +SP+
Sbjct: 877 PLQSATSPNLSNPSTIPHPTSTDPSSSQRITTRSANGIFKPNPKYFSNFHTATTPNISPI 936
Query: 1375 PRSHIQALRVPHWKQAMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSR 1196
P++ + AL +WK AMLDE+NALI N TWVLVPRPPNVN++RSMW+FRHK +ADG+ R
Sbjct: 937 PKTPVSALHDQNWKNAMLDEFNALIDNKTWVLVPRPPNVNVIRSMWIFRHKHNADGSFER 996
Query: 1195 YKARLVANGRSQQQGIDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLS 1016
YKARLV NG +QQQG+DCDETFSPVVKPATIRTVLS+A+S+ WPIHQ+DVKNAFLHG L+
Sbjct: 997 YKARLVGNGNTQQQGVDCDETFSPVVKPATIRTVLSIALSKSWPIHQMDVKNAFLHGHLN 1056
Query: 1015 ETVYMHQPPGFVDPAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLF 836
ETVYMHQP GF + +PD+VC LQ+SLYGLKQAPRAW+QRFA +V IGF +SK+D SLF
Sbjct: 1057 ETVYMHQPMGFRNKEYPDHVCLLQKSLYGLKQAPRAWYQRFAAYVATIGFTNSKSDTSLF 1116
Query: 835 VFHRGSDTAYLLLYVDDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTS 656
++ SD AYLLLYVDDIILTASS + + L EFAM DLG L+YFLGIS TR
Sbjct: 1117 IYRNKSDIAYLLLYVDDIILTASSDRLRKYFMALLGSEFAMKDLGPLSYFLGISVTRHPH 1176
Query: 655 GMFLSQSKFAEEILERAHMQKCNPCRTPVDTESKLGPD-GTPFDDPTLYRSLAGALQYLT 479
G+FLSQ+++A+ I+ERA M C+ C TPVDT+ KL + T F DPT YRSLAGALQYLT
Sbjct: 1177 GLFLSQTQYAKTIIERAGMSNCSTCPTPVDTKPKLSANSATAFADPTKYRSLAGALQYLT 1236
Query: 478 FTRPDISYAVQQVCLYMHDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDAD 299
FTRPDISYAVQQ+CL+MH P + H ALKRILRYL+GTL HGL LH SS +LI+YTDAD
Sbjct: 1237 FTRPDISYAVQQICLHMHAPTNEHMSALKRILRYLQGTLSHGLHLHNSSIDRLISYTDAD 1296
Query: 298 WAGCPVTRRSTSGYCVFLGDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWI 134
W GCP TRRSTSGYCVFLGDNL+SWS+KRQ TLSRSSAEAEYRGVANVV+++ W+
Sbjct: 1297 WGGCPDTRRSTSGYCVFLGDNLISWSSKRQPTLSRSSAEAEYRGVANVVSDSCWL 1351
Score = 95.1 bits (235), Expect = 1e-15
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 3/231 (1%)
Frame = -3
Query: 3527 MAMNHLTTFVPIKLDVDEMNYSSWVYYFSHLCHGYGILDHLVDXXXXXXXXXXXXXTKD- 3351
+ ++++ VP+ LD ++ Y SW F++L + + DHLV +
Sbjct: 11 LTISNVKLLVPVTLDNEQALYHSWAALFTNLTRVHDLYDHLVPPTEPSVHAAYIAAKSED 70
Query: 3350 -LEWLKVDFIIRSWIFSMLASNLQKRLVVLNPQTAKEVWVYLETIFQDNKRPRAMALKAE 3174
W ++D I WI+ ++ +L ++ TA+ W LE +FQDNK RA L+ E
Sbjct: 71 PAMWKRLDAAILQWIYGTISPDLLLA-ILRRDDTAEGAWKRLEALFQDNKASRATHLEEE 129
Query: 3173 LRNLKLGD-LTVDAYFQKIELIASVLNGLGSPLSNDNIVTFALQGLPNTYDVISTVIASR 2997
N D ++DAY ++ IA L + +P++N +V LP Y I ++
Sbjct: 130 FTNATFEDHNSIDAYCTYLQSIADRLADVDAPVTNGRLVLRLTGSLPEAYSGTVDFIQNQ 189
Query: 2996 EPFPDLKTVRSLLTTQEMCMKSKVQDPLVDATSASLMVLLANNNARRPSNP 2844
EP P + RS L E K+++ + + +LA +N P P
Sbjct: 190 EPLPSFDSCRSRLKMAERTTKARLARESIGSGQRQTAAMLAASNDSAPKRP 240
>gb|KZV24566.1| hypothetical protein F511_39264 [Dorcoceras hygrometricum]
Length = 1226
Score = 899 bits (2322), Expect = 0.0
Identities = 466/863 (53%), Positives = 571/863 (66%), Gaps = 10/863 (1%)
Frame = -1
Query: 2749 DPFGFSVKDFLTRWVLLRCDSTGDLYPVTQQSSTHPP--FALLSFSYTTWHRRLGHPGED 2576
DPFGFSV D T L+RCDS GDLYP+ S P + S WH RLGHP +
Sbjct: 382 DPFGFSVNDLQTGTKLMRCDSIGDLYPLFSNSQATSPNHSTFTTMSRAIWHNRLGHPDDT 441
Query: 2575 VLRRLESSNSISCNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVWTSPIPS 2396
++ L S+ I C K + C +C LGK KLPF+ S S FDI+HSD+WTSPI S
Sbjct: 442 IINSLRSNKFIECYK-ECKIFCSSCPLGKHTKLPFYDSLSYTFLPFDIIHSDLWTSPIAS 500
Query: 2395 ESGFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEYD 2216
SG +YY +FLD +S F+W +P+ +KS + F+ F A V QF +IK+ QC++G EY
Sbjct: 501 SSGHRYYVLFLDDYSKFLWTFPIAKKSQVKQLFMSFHALVKTQFERNIKSFQCNNGTEYI 560
Query: 2215 NTRFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALNM 2036
N FF G+ FR SCPHTS QNGK+ER L AS+PP++W AL+M
Sbjct: 561 NGTLKQFFDHHGLVFRLSCPHTSSQNGKAERHIKSINNCIRTILAHASMPPTFWHHALSM 620
Query: 2035 AAYLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYI--TVAHKLQPRSTACVF 1862
A YL NILPS I+ P LY PSY +LRVFGCLC+P I T +KLQ RS+ C +
Sbjct: 621 ATYLLNILPSKVIDYLSPTQILYQSDPSYSDLRVFGCLCFPLIPSTTINKLQERSSPCAY 680
Query: 1861 LGYPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHYDFLNTTNTIPLPVH 1682
LG NHRG +C D+SS KII+ RHV F E FPF++LH+ T +YDFL+ +
Sbjct: 681 LGPAPNHRGSKCYDISSGKIIICRHVGFIETEFPFSTLHKTTPTNYDFLSD--------N 732
Query: 1681 PTPAVINEXXXXXXXXXXXXXTDLHEPLPQPASPNQHTSSPPSVAQSLPTPQADXXXXXX 1502
P+++N +L P PQP Q TS P + PQ+
Sbjct: 733 IDPSIMN-----------IISQNLSPPNPQPNQTQQPTSPPIPHNE----PQSHTGPATP 777
Query: 1501 XXXXXXXXXXXXXXXPMVTRAKAGISKPLERM--NCHVTT---VSPLPRSHIQALRVPHW 1337
M TR GI KP + NCH TT +SP+P++ I ALR P+W
Sbjct: 778 TSSAASSPILDLPTHRMTTRTINGIFKPNPKYSTNCHATTTMAISPIPKNLISALRDPNW 837
Query: 1336 KQAMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARLVANGRSQQ 1157
AMLDE+NALI N TW LVP PP+VN++RSMW+ RHK+ +DG+ RYKARLV +G++Q+
Sbjct: 838 NCAMLDEFNALIDNKTWELVPGPPDVNVIRSMWILRHKYKSDGSFERYKARLVGDGKTQE 897
Query: 1156 QGIDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYMHQPPGFVD 977
QG+DCDETFSPVVKP TIRTVLS+ VS+ WP+HQ+DVKNAFLHG L+ETVYMHQP GF D
Sbjct: 898 QGVDCDETFSPVVKPTTIRTVLSITVSKSWPLHQMDVKNAFLHGHLNETVYMHQPMGFRD 957
Query: 976 PAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRGSDTAYLLL 797
HP +VC L++SLYGLKQAPR W+QRFA FV IGF HSK+D SLF++ GS+TAY+LL
Sbjct: 958 KNHPTHVCLLKKSLYGLKQAPRTWYQRFADFVATIGFSHSKSDHSLFIYKNGSNTAYILL 1017
Query: 796 YVDDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSGMFLSQSKFAEEI 617
YVDDIILTASS + +T L EFAM DLG L++FLGI+ TR G+FLSQ ++A +I
Sbjct: 1018 YVDDIILTASSDHLRKYFMTLLGSEFAMKDLGPLSFFLGIAVTRHAHGLFLSQKQYATKI 1077
Query: 616 LERAHMQKCNPCRTPVDTESKL-GPDGTPFDDPTLYRSLAGALQYLTFTRPDISYAVQQV 440
+ERA M C+ C TPVDT+SKL T FDDPT YRSLAGALQYLTFTRPDISYAVQQ+
Sbjct: 1078 IERAGMSSCSSCPTPVDTKSKLSATSDTLFDDPTKYRSLAGALQYLTFTRPDISYAVQQI 1137
Query: 439 CLYMHDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDADWAGCPVTRRSTSG 260
CL MH P H ALKRI+RYL+GTL HGL L+ S+ +LI+YTDADW GCP TRRSTSG
Sbjct: 1138 CLQMHAPTKEHMSALKRIIRYLQGTLSHGLHLYKSTVDRLISYTDADWGGCPDTRRSTSG 1197
Query: 259 YCVFLGDNLLSWSAKRQVTLSRS 191
YCVFLGDNL+SWS KRQ TLSRS
Sbjct: 1198 YCVFLGDNLVSWSYKRQPTLSRS 1220
Score = 72.4 bits (176), Expect = 8e-09
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 1/173 (0%)
Frame = -3
Query: 3344 WLKVDFIIRSWIFSMLASNLQKRLVVLNPQTAKEVWVYLETIFQDNKRPRAMALKAELRN 3165
W ++D I WI+ ++S+L ++ TA+ W LE +FQDNK RA L+ + N
Sbjct: 2 WKRLDAAILQWIYGTISSDLLLA-ILRRDDTAEGAWKRLEALFQDNKASRATHLEEDFTN 60
Query: 3164 LKLGDL-TVDAYFQKIELIASVLNGLGSPLSNDNIVTFALQGLPNTYDVISTVIASREPF 2988
+ +D Y ++ +A L + +P+SN +V LP Y I ++EP
Sbjct: 61 AVFEEHHNIDNYCNHLQSLADRLADVDAPVSNGRLVLRLTGSLPEAYSGTVDFIQNQEPL 120
Query: 2987 PDLKTVRSLLTTQEMCMKSKVQDPLVDATSASLMVLLANNNARRPSNPLEKVN 2829
P ++ RS L E +K++V T ++ A +N S+ K N
Sbjct: 121 PSFESCRSRLKMAERTIKARVARE--SGTRGGTAMVAATSNDSNDSSSAPKRN 171
>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
Length = 1803
Score = 906 bits (2341), Expect = 0.0
Identities = 476/922 (51%), Positives = 584/922 (63%), Gaps = 6/922 (0%)
Frame = -1
Query: 2749 DPFGFSVKDFLTRWVLLRCDSTGDLYPVTQQSSTHPPFALLSFSYTTWHRRLGHPGEDVL 2570
DP GFS+KD T+ V LRCDS GDLYP+ + S H A S S WH RLGHPG L
Sbjct: 454 DPTGFSIKDLQTQVVKLRCDSPGDLYPL-RLPSPHALSATSSPSVEHWHLRLGHPGSASL 512
Query: 2569 RRLESSNSISCNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVWTSPIPSES 2390
++ S CNKS C AC +G ++LPFH+S S+ F +VH+DVWTSPI S S
Sbjct: 513 SKVLGSFDFQCNKSAPHH-CSACHVGTNVRLPFHSSSSQTLFPFQLVHTDVWTSPIYSNS 571
Query: 2389 GFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEYDNT 2210
G+KYY +FLD F+H++W +P+ KS+++ F AY + QFG+ + ALQ D+G EYD+
Sbjct: 572 GYKYYVVFLDDFTHYIWTFPVRNKSEVFHTVRSFFAYAHTQFGLPVLALQTDNGKEYDSY 631
Query: 2209 RFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALNMAA 2030
G R SCP++SQQNGK+ER+ L ++ P S+W EAL A
Sbjct: 632 ALRSLLSLHGAVLRLSCPYSSQQNGKAERILRTINDCVRTMLVHSAAPLSFWAEALQTAM 691
Query: 2029 YLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYP--YITVAHKLQPRSTACVFLG 1856
+L N P A + P+ L P+YD+LRVFGCLCYP T HKL PRS ACVF+G
Sbjct: 692 HLINRRPCRATGSLKPYQLLLGAPPTYDHLRVFGCLCYPNTIATAPHKLSPRSLACVFIG 751
Query: 1855 YPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHYDFLNTTNTIPLPVHPT 1676
YPA+HRG+RC D+ S ++ SRHV F EDVFPF SP + P P H
Sbjct: 752 YPADHRGYRCYDMVSRRVFTSRHVTFVEDVFPFRDA---PSPR------PSAPPPPDHGD 802
Query: 1675 PAVINEXXXXXXXXXXXXXTDLHEPLPQPASPNQHTSSPPSVAQSLPTPQADXXXXXXXX 1496
++ H P +P +SPPS A S P+ A
Sbjct: 803 DTIV-----------LLPAPAQHVVTPVGTAPAHDAASPPSPASSTPSSAAPAHDVAPPP 851
Query: 1495 XXXXXXXXXXXXXP--MVTRAKAGISKPLERMNCHVT-TVSPLPRSHIQALRVPHWKQAM 1325
M TRA+AGISKP R T T+SP P S ALR P+W+ AM
Sbjct: 852 SPETSSPASASPPRHAMTTRARAGISKPNPRYAMTATSTLSPTPSSVRVALRDPNWRAAM 911
Query: 1324 LDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARLVANGRSQQQGID 1145
E++AL+ N TW LVPRPP I+ W+F+ K HADG+L +YKAR V G +Q+ G+D
Sbjct: 912 QAEFDALLANRTWTLVPRPPGARIITGKWVFKTKLHADGSLDKYKARWVVRGFNQRPGVD 971
Query: 1144 CDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYMHQPPGFVDPAHP 965
ETFSPVVKPATIRTVL+L S+ WP HQLDV NAFLHG L E V QP GF D A P
Sbjct: 972 FGETFSPVVKPATIRTVLTLISSKQWPAHQLDVSNAFLHGHLQERVLCQQPTGFEDAARP 1031
Query: 964 DYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRGSDTAYLLLYVDD 785
VC L RSLYGL+QAPRAWF+RFA T +GF S+ D SLFV RGSDTAYLLLYVDD
Sbjct: 1032 ADVCLLSRSLYGLRQAPRAWFKRFADHATSLGFVQSRADPSLFVLRRGSDTAYLLLYVDD 1091
Query: 784 IILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSGMFLSQSKFAEEILERA 605
+IL+ASS++ LQR+I L EF + D+G L YFLGI RT G LSQSK+A ++LERA
Sbjct: 1092 MILSASSSSLLQRIIDRLQAEFKVKDMGPLKYFLGIEVQRTADGFVLSQSKYATDVLERA 1151
Query: 604 HMQKCNPCRTPVDTESKLGPDGTP-FDDPTLYRSLAGALQYLTFTRPDISYAVQQVCLYM 428
M C TP D + KL D P F D + YRS+AGALQYLT TRPDI+YAVQQVCL+M
Sbjct: 1152 GMANCKAVATPADAKPKLSSDEGPLFQDSSWYRSIAGALQYLTLTRPDIAYAVQQVCLHM 1211
Query: 427 HDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDADWAGCPVTRRSTSGYCVF 248
H PR+ H LKRILRY++GT GL L S++ L A++DADWAGCP TRRSTSG+C+F
Sbjct: 1212 HAPREAHVTLLKRILRYIKGTAAFGLHLRASTSPTLTAFSDADWAGCPDTRRSTSGFCIF 1271
Query: 247 LGDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWIRNLLRELHHPLSTATIVYCDNV 68
LGD+L+SWS+KRQ T+SRSSAEAEYRGVAN VAE W+R LL ELH + ATI YCDN+
Sbjct: 1272 LGDSLISWSSKRQTTVSRSSAEAEYRGVANAVAECTWLRQLLGELHCRVPQATIAYCDNI 1331
Query: 67 SAVYLSTNPVQHQRTKHIEIDI 2
S+VY+S NPV H+RTKHIE+DI
Sbjct: 1332 SSVYMSKNPVHHKRTKHIELDI 1353
Score = 89.0 bits (219), Expect = 8e-14
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Frame = -3
Query: 3539 SDKLMAMNHLTTFVPIKLDVDEMNYSSWVYYFSHLCHGYGILDHLVDXXXXXXXXXXXXX 3360
S ++ ++ + VP+ LD+D NYS W F + +G+ H+ +
Sbjct: 23 STSVLQTVNIRSHVPVVLDLDVSNYSQWRCSFESVLGKFGLEAHVQEPPALDL------- 75
Query: 3359 TKDLEWLKVDFIIRSWIFSMLASNLQKRLVVLNPQ-TAKEVWVYLETIFQDNKRPRAMAL 3183
+ EW + D + +W+ + +A N+ VV P+ +A VW +E +F+DN R++ L
Sbjct: 76 -RTAEWRRADHCVVNWLHNSIAKNVFD--VVYKPRASAFTVWSDIEGVFRDNAVQRSVYL 132
Query: 3182 KAELRNLKLGDLTVDAYFQKIELIASVLNGLGSPLSNDNIVTFALQGLPNTYDVISTVIA 3003
+ E R++ GD+T+ Y K++ +A L + P+S + V L+GL + + IA
Sbjct: 133 ETEFRSINQGDMTITQYTAKLKQLADGLRDINMPVSEPSQVLNLLRGLNTKFRSLRASIA 192
Query: 3002 SREPFPDLKTVRSLLTTQEMCM----KSKVQDPLVDATSAS 2892
R P T RS L E+ M K++ + L T +S
Sbjct: 193 DRNPPHTFMTARSYLLLAELQMQHDAKAEAGEALYAGTGSS 233
>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
Length = 1417
Score = 870 bits (2249), Expect = 0.0
Identities = 463/921 (50%), Positives = 568/921 (61%), Gaps = 5/921 (0%)
Frame = -1
Query: 2749 DPFGFSVKDFLTRWVLLRCDSTGDLYPVTQQSSTHPPFALLSFSYTTWHRRLGHPGEDVL 2570
DP GFS+KD T+ V LRCDS GDLYP+ + S H A S S WH RLGHPG L
Sbjct: 454 DPTGFSIKDLQTQVVKLRCDSPGDLYPL-RLPSPHALSATSSPSVEHWHLRLGHPGSASL 512
Query: 2569 RRLESSNSISCNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVWTSPIPSES 2390
++ S CNKS C AC +G ++LPFH+S S+ F +VH+DVWTSPI S S
Sbjct: 513 SKVLGSFDFQCNKSAPHH-CSACHVGTNVRLPFHSSSSQTLFPFQLVHTDVWTSPIYSNS 571
Query: 2389 GFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEYDNT 2210
G+KYY +FLD F+H++W +P+ KS+++ F AY + QFG+ + ALQ D+G EYD+
Sbjct: 572 GYKYYVVFLDDFTHYIWTFPVRNKSEVFHTVRSFFAYAHTQFGLPVLALQTDNGKEYDSY 631
Query: 2209 RFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALNMAA 2030
G R SCP++SQQNGK+ER+ L ++ P S+W EAL A
Sbjct: 632 ALRSLLSLHGAVLRLSCPYSSQQNGKAERILRTINDYVRTMLVHSAAPLSFWAEALQTAT 691
Query: 2029 YLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYP--YITVAHKLQPRSTACVFLG 1856
+L N P A + P+ L P+YD+LRVFGCLCYP T HKL PRS ACVF+G
Sbjct: 692 HLINRRPCRATGSLTPYQLLLGAPPTYDHLRVFGCLCYPNTIATAPHKLSPRSLACVFIG 751
Query: 1855 YPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHYDFLNTTNTIPLPVHPT 1676
YPA+HRG+RC D+ S ++ SRHV F EDVFPF SP + P P H
Sbjct: 752 YPADHRGYRCYDMVSRRVFTSRHVTFVEDVFPFRDA---PSPR------PSAPPPPDHGD 802
Query: 1675 PAVINEXXXXXXXXXXXXXTDLHEPLPQPASPNQHTSSPPSVAQSLPTPQADXXXXXXXX 1496
++ H P +P +SPPS A S P+ A
Sbjct: 803 DTIV-----------LLPAPAQHVVTPVGTAPAHDAASPPSPASSTPSSAAPAHDVAPPP 851
Query: 1495 XXXXXXXXXXXXXP--MVTRAKAGISKPLERMNCHVT-TVSPLPRSHIQALRVPHWKQAM 1325
M TRA+AGISKP R T T+SP P S ALR P+W+ AM
Sbjct: 852 SPETSSPASASPPRHAMTTRARAGISKPNPRYAMTATSTLSPTPSSVRAALRDPNWRAAM 911
Query: 1324 LDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARLVANGRSQQQGID 1145
E++AL+ N TW LVPRPP I+ W+F+ K HADG+L +YKAR V G +Q+ G+D
Sbjct: 912 QAEFDALLANRTWTLVPRPPGARIITGKWVFKTKLHADGSLDKYKARWVVRGFNQRPGVD 971
Query: 1144 CDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYMHQPPGFVDPAHP 965
ETFSPVVKPATIRTVL+L S+ WP HQLDV NAFLHG L E V QP GF D A P
Sbjct: 972 FGETFSPVVKPATIRTVLTLISSKQWPAHQLDVSNAFLHGHLQERVLCQQPTGFEDAARP 1031
Query: 964 DYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRGSDTAYLLLYVDD 785
VC L RSLYGL+QAPRAWF+RFA T +GF S+ D SLFV RGSDTAYLLLYVDD
Sbjct: 1032 ADVCLLSRSLYGLRQAPRAWFKRFADHATSLGFVQSRADPSLFVLRRGSDTAYLLLYVDD 1091
Query: 784 IILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSGMFLSQSKFAEEILERA 605
+IL+ASS++ LQR+I L EF + D+G L YFLGI RT G LSQSK+A
Sbjct: 1092 MILSASSSSLLQRIIDRLQAEFKVKDMGPLKYFLGIEVQRTADGFVLSQSKYAT------ 1145
Query: 604 HMQKCNPCRTPVDTESKLGPDGTPFDDPTLYRSLAGALQYLTFTRPDISYAVQQVCLYMH 425
DD + YRS+AGALQYLT TRPDI+YAVQQVCL+MH
Sbjct: 1146 -------------------------DDSSWYRSIAGALQYLTLTRPDIAYAVQQVCLHMH 1180
Query: 424 DPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDADWAGCPVTRRSTSGYCVFL 245
PR+ H LKRILRY++GT GL L S++ L A++DADWAGCP TRRSTSG+C+FL
Sbjct: 1181 APREAHVTLLKRILRYIKGTAAFGLHLRASTSPTLTAFSDADWAGCPDTRRSTSGFCIFL 1240
Query: 244 GDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWIRNLLRELHHPLSTATIVYCDNVS 65
GD+L+SWS+KRQ T+SRSSAEAEYRGVAN VAE W+R LL ELH + ATI YCDN+S
Sbjct: 1241 GDSLISWSSKRQTTVSRSSAEAEYRGVANAVAECTWLRQLLGELHCRVPQATIAYCDNIS 1300
Query: 64 AVYLSTNPVQHQRTKHIEIDI 2
+VY+S NPV H+RTKHIE+DI
Sbjct: 1301 SVYMSKNPVHHKRTKHIELDI 1321
Score = 89.0 bits (219), Expect = 8e-14
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Frame = -3
Query: 3539 SDKLMAMNHLTTFVPIKLDVDEMNYSSWVYYFSHLCHGYGILDHLVDXXXXXXXXXXXXX 3360
S ++ ++ + VP+ LD+D NYS W F + +G+ H+ +
Sbjct: 23 STSVLQTVNIRSHVPVVLDLDVSNYSQWRCSFESVLGKFGLEAHVQEPPALDL------- 75
Query: 3359 TKDLEWLKVDFIIRSWIFSMLASNLQKRLVVLNPQ-TAKEVWVYLETIFQDNKRPRAMAL 3183
+ EW + D + +W+ + +A N+ VV P+ +A VW +E +F+DN R++ L
Sbjct: 76 -RTAEWRRADHCVVNWLHNSIAKNVFD--VVYKPRASAFTVWSDIEGVFRDNAVQRSVYL 132
Query: 3182 KAELRNLKLGDLTVDAYFQKIELIASVLNGLGSPLSNDNIVTFALQGLPNTYDVISTVIA 3003
+ E R++ GD+T+ Y K++ +A L + P+S + V L+GL + + IA
Sbjct: 133 ETEFRSINQGDMTITQYTAKLKQLADGLRDINMPVSEPSQVLNLLRGLNTKFRSLRASIA 192
Query: 3002 SREPFPDLKTVRSLLTTQEMCM----KSKVQDPLVDATSAS 2892
R P T RS L E+ M K++ + L T +S
Sbjct: 193 DRNPPHTFMTARSYLLLAELQMQHDAKAEAGEALYAGTGSS 233
>gb|OTG05826.1| putative serine/threonine-protein kinase, active site protein
[Helianthus annuus]
Length = 1471
Score = 841 bits (2173), Expect = 0.0
Identities = 423/820 (51%), Positives = 539/820 (65%), Gaps = 18/820 (2%)
Frame = -1
Query: 2749 DPFGFSVKDFLTRWVLLRCDSTGDLYPVTQQSSTHPPFALLSFSYTTWHRRLGHPGEDVL 2570
DP+GFS+KD T L R +S GDLY T + P L++ SY WH RLGHPG VL
Sbjct: 652 DPYGFSLKDLTTGEHLSRHNSEGDLYTFT---APEPSSCLVAASYLPWHDRLGHPGAQVL 708
Query: 2569 RRLESSNSISCNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVWTSPIPSES 2390
L + CNK+K+SA C +C + +LPF+ S S + FDI+H D+WTSPIPS+
Sbjct: 709 DTLIRFFNFPCNKNKVSAFCDSCHVSNSKRLPFYASTSTTFAPFDIIHCDLWTSPIPSKQ 768
Query: 2389 GFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEYDNT 2210
G+KY + +D+F+HFVWVYPL KS+ + F F ++ QF IK QCD GGE+DN
Sbjct: 769 GYKYCMVLIDNFTHFVWVYPLKFKSETFPTFTKFHRLIHTQFNRKIKTFQCDLGGEFDNN 828
Query: 2209 RFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALNMAA 2030
F +F G+ FRF+CPHTS QNG++ERM L A++PP++WVEAL+ AA
Sbjct: 829 AFKEFANQNGLLFRFACPHTSSQNGRAERMIRRLNDVIRSLLIHANLPPAFWVEALHTAA 888
Query: 2029 YLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYI--TVAHKLQPRSTACVFLG 1856
YL NILP+ + P LY PSYD+LRVFGC CYP T HKL P++ C+FLG
Sbjct: 889 YLHNILPTKRLKFFTPTFALYLRHPSYDHLRVFGCACYPNTSATQPHKLHPQANRCIFLG 948
Query: 1855 YPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFAS--------LHQYTSPHYDFLNTTNT 1700
YP + RG+RCLD ++ K+ +SRHV FDE+ FP+ + L P +DF+ T T
Sbjct: 949 YPPDFRGYRCLDPTTGKVSISRHVTFDENTFPYTTPQPTTFQFLDDSIPPGFDFIPTQPT 1008
Query: 1699 I-------PLPVHPTPAVINEXXXXXXXXXXXXXTDLHEPLPQPASPNQHTSSPPSVAQS 1541
P+ P P+V ++ P+PA+ + TS+ P + +
Sbjct: 1009 TTPPGPNPPIQTGPNPSVQPATPAPSQHSPPPFRPIIYTRRPKPAATS--TSAQPDLLPT 1066
Query: 1540 LPTPQADXXXXXXXXXXXXXXXXXXXXXPMVTRAKAGISKPLERMNCHVTTVSPLPRSHI 1361
P PM TR+K G SKP ++N H TT+SP+P ++
Sbjct: 1067 NSQPTQPAHDHHSHTSAAQSTTVPPNLHPMATRSKTGSSKPAHKLNLHTTTISPIPSTYG 1126
Query: 1360 QALRVPHWKQAMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARL 1181
+A P+W QAM E+NAL N TW LVPRP N ++R MWLFRHKF +DG+L RY ARL
Sbjct: 1127 KAFTDPNWVQAMQAEFNALQVNDTWELVPRPDNHPVIRCMWLFRHKFKSDGSLERYMARL 1186
Query: 1180 VANGRSQQQGIDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYM 1001
V NG+SQ GIDCD+TFSPVVKPATIRTVLSLAVSR WPIHQLDVKNAFLHG L+ETVYM
Sbjct: 1187 VVNGKSQTVGIDCDDTFSPVVKPATIRTVLSLAVSRAWPIHQLDVKNAFLHGHLNETVYM 1246
Query: 1000 HQPPGFVDPAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRG 821
HQP GF D +P++VC L++SLYGLKQAPRAW+ RFA ++T GF+ SK D SLFV+ G
Sbjct: 1247 HQPAGFTDKRYPNFVCRLKKSLYGLKQAPRAWYNRFASYITSHGFKSSKCDNSLFVYSHG 1306
Query: 820 SDTAYLLLYVDDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSGMFLS 641
TAYLLLYVDDI+LTASS +FL+++I L EFAMTDLG L++FLGI T T G+FL+
Sbjct: 1307 PHTAYLLLYVDDIVLTASSDSFLKQIIQTLSREFAMTDLGRLHHFLGIKVTHTAHGLFLN 1366
Query: 640 QSKFAEEILERAHMQKCNPCRTPVDTESKLG-PDGTPFDDPTLYRSLAGALQYLTFTRPD 464
Q ++A+EI+ RA M C PC TPVD +KL G PF DPTLYRSLAGALQYLTFTRPD
Sbjct: 1367 QEQYAKEIINRASMTNCKPCSTPVDLATKLSTTSGAPFPDPTLYRSLAGALQYLTFTRPD 1426
Query: 463 ISYAVQQVCLYMHDPRDTHFHALKRILRYLRGTLDHGLQL 344
ISYAVQQ+CL+MHDPR+ HF +KRI+RYL+GTL++G+++
Sbjct: 1427 ISYAVQQICLFMHDPREPHFAFMKRIIRYLQGTLNYGIRI 1466
Score = 67.0 bits (162), Expect = 4e-07
Identities = 38/142 (26%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Frame = -3
Query: 3344 WLKVDFIIRSWIFSMLASNLQKRLVVLNPQTAKEVWVYLETIFQDNKRPRAMALKAELRN 3165
W ++D ++ WI + ++ +L R V+ T E WV++E + NK+ RA AL+ N
Sbjct: 242 WKELDALVLQWILNTISDSLVGR-VIHTATTTHEAWVHIEKVLLSNKQARAAALETTFVN 300
Query: 3164 LKLGDL-TVDAYFQKIELIASVLNGLGSPLSNDNIVTFALQGLPNTYDVISTVIASREPF 2988
L L ++D Y +++ +A+ L + P++ V + GLP YD + +I +
Sbjct: 301 LTLAACSSLDDYCTRLQDLANQLADVDHPITESRFVLQVVHGLPAEYDTTAALIHQNQ-- 358
Query: 2987 PDLKTVRSLLTTQEMCMKSKVQ 2922
D T R++L +++ ++++ Q
Sbjct: 359 ADWDTARTMLNDEKIRLEARQQ 380
>gb|PNY14825.1| hypothetical protein L195_g011512 [Trifolium pratense]
Length = 696
Score = 781 bits (2017), Expect = 0.0
Identities = 398/660 (60%), Positives = 474/660 (71%), Gaps = 12/660 (1%)
Frame = -1
Query: 1945 NLRVFGCLCYPYITVA--HKLQPRSTACVFLGYPANHRGFRCLDLSSNKIILSRHVRFDE 1772
+LR FGCLC+P + HKLQPRST C+FLGYP NHRG++CL++ ++KII+ RHV FDE
Sbjct: 2 HLRTFGCLCFPLFPASTIHKLQPRSTPCIFLGYPPNHRGYKCLNMKTHKIIICRHVLFDE 61
Query: 1771 DVFPFASLHQYTSPHYDFLNTTNTIPLPVHPTPAVINEXXXXXXXXXXXXXTDLHEPLPQ 1592
FP+A LH P Y FL+ + L H T L +P P
Sbjct: 62 SNFPYAKLHTPHPPTYTFLDNDISPYLIDHITT--------------------LDQPPPT 101
Query: 1591 PASPNQHTSSPPSVAQSLPT------PQADXXXXXXXXXXXXXXXXXXXXXPMVTRAKAG 1430
A+ +H+S PP S T P VTR++ G
Sbjct: 102 SANNARHSSPPPPAPTSATTTRPPSPPPPPSPPPLPNPLPPIYQPTSQTNSKPVTRSQHG 161
Query: 1429 ISKPLER---MNCHVTTVSPLPRSHIQALRVPHWKQAMLDEYNALITNGTWVLVPRPPNV 1259
I KP ++ ++ HVT SPLPR+ + AL+ P+WK AM DEYNALI N TW LVPRPPNV
Sbjct: 162 IFKPNQKYCGLHNHVTK-SPLPRNPVSALKDPNWKMAMHDEYNALIKNETWDLVPRPPNV 220
Query: 1258 NIVRSMWLFRHKFHADGTLSRYKARLVANGRSQQQGIDCDETFSPVVKPATIRTVLSLAV 1079
N++RSMW+FRHK ++DG+ R+KARLV +G QQ GIDC ETFSPVVKPATIRTVLS+A+
Sbjct: 221 NVIRSMWIFRHKENSDGSFERHKARLVGDGAGQQVGIDCGETFSPVVKPATIRTVLSIAI 280
Query: 1078 SRDWPIHQLDVKNAFLHGDLSETVYMHQPPGFVDPAHPDYVCHLQRSLYGLKQAPRAWFQ 899
S W IHQLDVKNAFLHG+L ETVYM+QP GF +P HPD+VC L++SLYGLKQAPRAW++
Sbjct: 281 SHSWHIHQLDVKNAFLHGELKETVYMYQPLGFRNPQHPDHVCRLRKSLYGLKQAPRAWYK 340
Query: 898 RFAGFVTRIGFQHSKTDASLFVFHRGSDTAYLLLYVDDIILTASSTTFLQRVITALHGEF 719
RFA + + IGF SK D SLF++ + S AYLLLYVDDIILT SS T Q +I+ L EF
Sbjct: 341 RFADYASSIGFCQSKCDNSLFIYKKDSHVAYLLLYVDDIILTTSSDTLRQSIISLLSSEF 400
Query: 718 AMTDLGSLNYFLGISATRTTSGMFLSQSKFAEEILERAHMQKCNPCRTPVDTESKL-GPD 542
AM DLG LNYFLGI+ R G+FLSQ K+AEEIL RA M C C TPVDT+ KL
Sbjct: 401 AMKDLGHLNYFLGIAVQRHAHGLFLSQKKYAEEILSRAGMSSCKTCPTPVDTKPKLSATH 460
Query: 541 GTPFDDPTLYRSLAGALQYLTFTRPDISYAVQQVCLYMHDPRDTHFHALKRILRYLRGTL 362
P+ DP+LYRSLAGALQYLTFTRPDISYAVQQ+CL+MH+P DTH HAL+RILRY+RGT
Sbjct: 461 SVPYADPSLYRSLAGALQYLTFTRPDISYAVQQICLFMHNPMDTHMHALRRILRYIRGTT 520
Query: 361 DHGLQLHVSSTAQLIAYTDADWAGCPVTRRSTSGYCVFLGDNLLSWSAKRQVTLSRSSAE 182
+GL L+ SST+ LI+YTDADW GCP TRRSTSGYCVFLGDNLLSWS+KRQ TLSRSSAE
Sbjct: 521 HYGLHLYPSSTSSLISYTDADWGGCPDTRRSTSGYCVFLGDNLLSWSSKRQPTLSRSSAE 580
Query: 181 AEYRGVANVVAETAWIRNLLRELHHPLSTATIVYCDNVSAVYLSTNPVQHQRTKHIEIDI 2
AEYRGVANVV+E+ W+RNLL ELH P+ AT+VYCDNVSA+YLS NPVQHQRTKHIE+DI
Sbjct: 581 AEYRGVANVVSESCWLRNLLLELHCPIHKATMVYCDNVSAIYLSGNPVQHQRTKHIEMDI 640
>gb|OTF91857.1| putative ribonuclease H-like domain, Reverse transcriptase,
RNA-dependent DNA polymerase [Helianthus annuus]
Length = 1146
Score = 776 bits (2005), Expect = 0.0
Identities = 404/715 (56%), Positives = 494/715 (69%), Gaps = 23/715 (3%)
Frame = -1
Query: 2077 ASIPPSYWVEALNMAAYLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYI--T 1904
A++PPS+WVEAL+ A YL NILP+ +N P LY P Y++LRVFGC CYP T
Sbjct: 16 ANLPPSFWVEALHTATYLHNILPTKRLNFYTPTFALYLRHPDYEHLRVFGCACYPNTSAT 75
Query: 1903 VAHKLQPRSTACVFLGYPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHY 1724
HKL RS C+FLGYP + RG+RC D ++ K+ +SRHV FDE VFP+ H +S Y
Sbjct: 76 QPHKLHYRSVRCIFLGYPPDFRGYRCFDPTTGKVHISRHVTFDEHVFPYTIPHSPSS--Y 133
Query: 1723 DFLNTT-------------------NTIPLPVHPTPAVINEXXXXXXXXXXXXXTDLHEP 1601
+FL+ N P PT I++ T +
Sbjct: 134 NFLDDPTPPGFTFHRPSPQAQQAKPNQQAQPNQPTQTPISDLPVHPAHPVTAPYTFTYSR 193
Query: 1600 LPQPASPNQHTSSPPSVAQSLPTPQADXXXXXXXXXXXXXXXXXXXXXPMVTRAKAGISK 1421
P+P Q SP + ++PTP M TR+K+ +
Sbjct: 194 RPRPLPIPQPIPSPGLLPHTVPTPAYSTTQPTTSTLNQHP---------MTTRSKSCAN- 243
Query: 1420 PLERMNCHVTTVSPLPRSHIQALRVPHWKQAMLDEYNALITNGTWVLVPRPPNVNIVRSM 1241
L ++ H T++SP+P S+ +AL P+W AM EY+AL N TW LVPRP + ++R M
Sbjct: 244 -LSSIH-HTTSLSPVPTSYAKALTDPNWLHAMQTEYSALQDNETWELVPRPHDHPVIRCM 301
Query: 1240 WLFRHKFHADGTLSRYKARLVANGRSQQQGIDCDETFSPVVKPATIRTVLSLAVSRDWPI 1061
WLFRHKF +DGTL RYKARLV NG SQ G+DCDETFSPVVKPATIRTVLSLAVSR W I
Sbjct: 302 WLFRHKFKSDGTLERYKARLVVNGNSQTVGVDCDETFSPVVKPATIRTVLSLAVSRAWSI 361
Query: 1060 HQLDVKNAFLHGDLSETVYMHQPPGFVDPAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFV 881
HQLDVKNAFLHG+L+ETV+MHQPPGF D PD+VC L++SLYGLKQAPRAW+ RF F+
Sbjct: 362 HQLDVKNAFLHGELNETVFMHQPPGFYDKRFPDHVCRLKKSLYGLKQAPRAWYTRFENFI 421
Query: 880 TRIGFQHSKTDASLFVFHR-GSDTAYLLLYVDDIILTASSTTFLQRVITALHGEFAMTDL 704
T GF+ S D SLFV+H+ S+ AYLLLYVDDI+LTAS+ L +I L EFAMTDL
Sbjct: 422 TSKGFRSSTCDQSLFVYHQDASNIAYLLLYVDDIVLTASNDRLLNDIIGTLSREFAMTDL 481
Query: 703 GSLNYFLGISATRTTSGMFLSQSKFAEEILERAHMQKCNPCRTPVDTESKLGP-DGTPFD 527
G L++FLGI T+ G+FLSQ+++A++I+ RA M C PC TPVD SKL DG F
Sbjct: 482 GRLHHFLGIKVTQQKHGIFLSQAQYAKDIIARASMSSCKPCATPVDLSSKLSANDGPLFS 541
Query: 526 DPTLYRSLAGALQYLTFTRPDISYAVQQVCLYMHDPRDTHFHALKRILRYLRGTLDHGLQ 347
DPTLYRSLAGALQYLTFTRPD+SYAVQQVCL+MH+PR+ HF +KR++RYL+GT+D+GL+
Sbjct: 542 DPTLYRSLAGALQYLTFTRPDLSYAVQQVCLFMHEPREPHFAFMKRMIRYLQGTIDYGLR 601
Query: 346 LHVSSTAQLIAYTDADWAGCPVTRRSTSGYCVFLGDNLLSWSAKRQVTLSRSSAEAEYRG 167
+ S + L+AY+DADW GCP +RRSTSGYCVFLGDNL+SWSAKRQ T+SRSSAEAEYRG
Sbjct: 602 IVKSGSHNLVAYSDADWGGCPDSRRSTSGYCVFLGDNLISWSAKRQPTVSRSSAEAEYRG 661
Query: 166 VANVVAETAWIRNLLRELHHPLSTATIVYCDNVSAVYLSTNPVQHQRTKHIEIDI 2
VAN VAET+WIRNLL ELH PL A++V+CDNVSAVYLS NPVQHQRTKHIEIDI
Sbjct: 662 VANAVAETSWIRNLLLELHTPLQRASVVFCDNVSAVYLSNNPVQHQRTKHIEIDI 716
>gb|PRQ42184.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1024
Score = 764 bits (1973), Expect = 0.0
Identities = 421/936 (44%), Positives = 550/936 (58%), Gaps = 28/936 (2%)
Frame = -1
Query: 2728 KDFLTRWVLLRCDSTGDLYPVT-----QQSSTHP--PFALL-SFSYTTWHRRLGHPGEDV 2573
KD + VL G L+P+ QSST P P L S S TTWH+RLGHP
Sbjct: 44 KDLPSGKVLFHGPCNGSLFPIRLKKSLPQSSTQPSTPSVLFTSASSTTWHKRLGHPSPQA 103
Query: 2572 LRRLESSNSIS--CNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVW-TSPI 2402
LRRL S + ++ C+ S LC CQLG++ KLPF S + I+HSDVW + I
Sbjct: 104 LRRLVSHHQLNVLCSSSP-PPLCSDCQLGRRSKLPFVNSSCTTTAPLQIIHSDVWGPTSI 162
Query: 2401 PSESGFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGE 2222
S SGFKYY +F+D +S F W++PLH KS+++ F F+ V QF IK+L+CD+GGE
Sbjct: 163 LSVSGFKYYVLFIDDWSRFTWLFPLHCKSEVFHSFQKFKLLVENQFDTKIKSLRCDNGGE 222
Query: 2221 YDNTRFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEAL 2042
Y + F F GI +FSCPHT +QNG +ER Q+S+P YWVE +
Sbjct: 223 YTSAVFQSFLSNNGIAQQFSCPHTPEQNGMAERKHRHLIELTRTLFAQSSLPFKYWVEIV 282
Query: 2041 NMAAYLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYIT--VAHKLQPRSTAC 1868
+ YL N LPS++++ PF +L+N +P Y+ LR +GCLC+P++ AHKL RS C
Sbjct: 283 QTSVYLINRLPSSSLHFISPFEQLFNTAPDYNFLRAYGCLCFPWLKPYAAHKLDFRSRKC 342
Query: 1867 VFLGYPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHYDFLNTTNTIPLP 1688
VFLGY +G+RCLD ++ ++ +SRHV FDE+ FPF P N P+P
Sbjct: 343 VFLGYSLYQKGYRCLDPTNGRVYVSRHVIFDENTFPFKEKLSAPQP-------ANPPPIP 395
Query: 1687 VHPTPAVINEXXXXXXXXXXXXXTDLHEPLP---QPASPNQHTSS--PPSVAQSLPTPQ- 1526
+P + L EP P QP +P T S PP + TP
Sbjct: 396 SYPILLPL--------------PPSLSEPTPNIIQPTTPTNPTLSLSPPPSPSPIQTPPI 441
Query: 1525 ---ADXXXXXXXXXXXXXXXXXXXXXPMVTRAKAGISKPLERMNCH------VTTVSPLP 1373
M TR+K I KP H +TT S LP
Sbjct: 442 TQLTSPPHPPPPTRSRQHPPPGPPSHNMQTRSKNNIFKPKAFSTKHQFTSAFLTTPSQLP 501
Query: 1372 RSHIQALRVPHWKQAMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRY 1193
+++QA + P W AM DE AL +GTWVLVP P+ N+V W+FR K+ ADG++ RY
Sbjct: 502 STYLQASKDPKWVTAMCDEIFALHRSGTWVLVPPHPSHNVVGCRWIFRIKYRADGSIDRY 561
Query: 1192 KARLVANGRSQQQGIDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSE 1013
KARLVA G +QQ G+D +TFS V KPATIR VLSLAV DW I QLDV NAFLHG L+E
Sbjct: 562 KARLVAKGFTQQAGLDYSKTFSHVAKPATIRVVLSLAVQNDWTISQLDVSNAFLHGHLTE 621
Query: 1012 TVYMHQPPGFVDPAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFV 833
V+M QPPGFVD P YVC L++SLYGLKQAPRAW++ + +GF S D SLFV
Sbjct: 622 DVFMAQPPGFVDSTKPSYVCQLKKSLYGLKQAPRAWYEALYQCLLTLGFSASLADPSLFV 681
Query: 832 FHRGSDTAYLLLYVDDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSG 653
H T +LL+YVDDI+LT S Q +I L FA+ DLG+L+YFLG+ R++
Sbjct: 682 KH-DQHTTFLLVYVDDIVLTGSCPLHCQSLIQQLSQRFAIKDLGALHYFLGLEVQRSSDS 740
Query: 652 MFLSQSKFAEEILERAHMQKCNPCRTPVDTESKLGPDGTPFDDPTLYRSLAGALQYLTFT 473
++L QSK+ ++L + +M P +P + G P DP+ YRS+ GALQYLT+T
Sbjct: 741 LYLCQSKYTHDLLSKFNMLGVKPNASPESSSKLDSHSGEPLSDPSTYRSMVGALQYLTWT 800
Query: 472 RPDISYAVQQVCLYMHDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDADWA 293
RPDI++AV QVC +MH+PR H A+KRI RYL+GT D GL +A L ++DADWA
Sbjct: 801 RPDIAHAVNQVCQHMHNPRTPHLTAVKRIFRYLKGTPDQGLHFTKGPSA-LTIFSDADWA 859
Query: 292 GCPVTRRSTSGYCVFLGDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWIRNLLREL 113
GCP+ RRST+ YCVFLG NL+SWSAK+Q ++SRSS EAEYR +A VAE W+ L R+L
Sbjct: 860 GCPIDRRSTTSYCVFLGSNLISWSAKKQSSVSRSSTEAEYRALALSVAEVLWLCFLFRDL 919
Query: 112 HHPLSTATIVYCDNVSAVYLSTNPVQHQRTKHIEID 5
L + YCDN+SA+ L+ NP+ H RTKH+ +D
Sbjct: 920 KVFLGQPPLFYCDNISAIALAANPIFHNRTKHVAVD 955
>gb|KYP64614.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1291
Score = 757 bits (1954), Expect = 0.0
Identities = 406/924 (43%), Positives = 541/924 (58%), Gaps = 26/924 (2%)
Frame = -1
Query: 2698 RCDSTGDLYPVTQ--QSSTHPPFALLSFSYTTWHRRLGHPGEDVLRRLESSNSISCNKSK 2525
RCD LY + Q Q+ +L S+ WH RLGH DV+ +L ++ +
Sbjct: 321 RCDQ--GLYVMDQGPQALLTTSSSLPRASFELWHSRLGHVNFDVINKLNKQGYLNVSSIL 378
Query: 2524 LSALC-HACQLGKQIKLPFHTSESKVASIFDIVHSDVW-TSPIPSESGFKYYAIFLDHFS 2351
+C CQ+ K +L F+ + + +++ D++H D+W SP+ S +G+ Y+ IF+D FS
Sbjct: 379 PKPICCTTCQMAKSKRLVFYDNNKRASAVLDLIHCDLWGPSPVASVAGYSYFVIFVDDFS 438
Query: 2350 HFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEYDNTRFHDFFRTTGIQF 2171
F W YPL KSD YD + F+ +V QF IK Q D+G E+ N + D F ++G+
Sbjct: 439 RFTWFYPLRHKSDFYDVLVRFKVFVENQFSRFIKVFQSDNGTEFTNNKVQDLFASSGVLH 498
Query: 2170 RFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALNMAAYLSNILPSTAINN 1991
RFSCPHT QNG+ ER L+Q+ +P YWV+A + A Y+ N +PS ++
Sbjct: 499 RFSCPHTQAQNGRVERKHRHVLEIGLAMLYQSHVPTRYWVDAFSSAVYIINRVPSQVLSG 558
Query: 1990 EVPFTKLYNHSPSYDNLRVFGCLCYPYIT--VAHKLQPRSTACVFLGYPANHRGFRCLDL 1817
++PFT L+ +P+Y N FGC +P + + +K PRS+ C+FLGY ++H+GF+CLDL
Sbjct: 559 QIPFTLLFQVAPTYANFHPFGCRVFPCLRPYMKNKFSPRSSPCIFLGYSSHHKGFKCLDL 618
Query: 1816 SSNKIILSRHVRFDEDVFPFA-----SLHQYTSPHYDFL------NTTNTIPLPVHPTPA 1670
++++I +SRH +FDE FPFA S+ S Y+ + + + + LP P P
Sbjct: 619 TTSRIYVSRHAQFDETCFPFAGSPSSSIDLMVSSFYEPITGFKSSSMSASSSLPTRPPPV 678
Query: 1669 VINEXXXXXXXXXXXXXTDLHEPLPQPASPNQHTSSPPSVAQSLPTPQADXXXXXXXXXX 1490
P PA P SS P P+P A
Sbjct: 679 TTLSCPSCVSLDAALA--------PHPAPPVAPASSEPVSPPRTPSP-ASTSPIVLPASS 729
Query: 1489 XXXXXXXXXXXPMVTRAKAGISKPLER--MNCHVTT-------VSPLPRSHIQALRVPHW 1337
M TR++ GI +P R + H T V+ P+ A++ P W
Sbjct: 730 DASIQPAPVAVRMQTRSQNGIFRPNPRYALAHHQPTALLTALHVASDPKGFKSAMKHPQW 789
Query: 1336 KQAMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARLVANGRSQQ 1157
AM DE +AL N TW LVPRP NIV S W+FR K +DGT+ R KARLVA G +Q
Sbjct: 790 LAAMEDELSALRNNHTWTLVPRPSAPNIVGSKWVFRTKHKSDGTIERLKARLVAQGFTQI 849
Query: 1156 QGIDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYMHQPPGFVD 977
G D TFSPVVK TIR +LSLAV WP+HQLDVKNAFLHG L+E VYM QPPGFVD
Sbjct: 850 PGFDYSLTFSPVVKATTIRLILSLAVLNGWPLHQLDVKNAFLHGHLTEIVYMEQPPGFVD 909
Query: 976 PAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRGSDTAYLLL 797
P P +VC L ++LYGLKQAPRAWFQR + F+ R GF S+ D SLF F+RG T YLL+
Sbjct: 910 PRFPTHVCRLNKALYGLKQAPRAWFQRLSSFLMRSGFICSRADPSLFFFYRGRITLYLLV 969
Query: 796 YVDDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSGMFLSQSKFAEEI 617
YVDDIILT S FL + I L+ EFA+ LG L YFLG+ T T G+FL Q+K+A ++
Sbjct: 970 YVDDIILTGSDPPFLTQFIARLNAEFAIKYLGKLGYFLGLEITYTADGLFLGQAKYAHDL 1029
Query: 616 LERAHMQKCNPCRTPVDTESKLGPDGTPFDDPTLYRSLAGALQYLTFTRPDISYAVQQVC 437
L RA M + P TP+ L DG + DPT YRSL GALQYLT TRPD+SYAV V
Sbjct: 1030 LSRAMMLEAKPVSTPLAAGFHLVSDGVAYSDPTQYRSLVGALQYLTITRPDLSYAVNTVS 1089
Query: 436 LYMHDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDADWAGCPVTRRSTSGY 257
++ P HF A+KRILRY+ GT GL S + ++ Y+DADWA C TRRST GY
Sbjct: 1090 QFLQAPTIDHFQAVKRILRYVCGTQHFGLTFRSSPSPAVLGYSDADWARCTDTRRSTYGY 1149
Query: 256 CVFLGDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWIRNLLRELHHPLSTATIVYC 77
+FLGDNLLSWSAK+Q T++RSS E+EYR +AN +E W+ NLLREL LS ++
Sbjct: 1150 AIFLGDNLLSWSAKKQPTVARSSCESEYRAMANTASELVWLLNLLRELRVGLSATPLLLS 1209
Query: 76 DNVSAVYLSTNPVQHQRTKHIEID 5
DN SA++++ NPV H+R KHI++D
Sbjct: 1210 DNQSALFMAQNPVAHKRAKHIDLD 1233
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 754 bits (1946), Expect = 0.0
Identities = 417/939 (44%), Positives = 545/939 (58%), Gaps = 24/939 (2%)
Frame = -1
Query: 2749 DPFGFSVKDFLTRWVLLRCDSTGDLYPVTQQSSTH------PPFALL--SFSYTTWHRRL 2594
DPFGF VKD T +L + S G LYP +S P AL+ TWHRRL
Sbjct: 677 DPFGFYVKDLSTGKMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAKADIHTWHRRL 736
Query: 2593 GHPGEDVLRRLESSNSISC-NKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDV 2417
GHP L + N + ++C ACQLGK +L F T + ++H+DV
Sbjct: 737 GHPSGGTLHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRLSFSTLPCTSSRPLQLLHTDV 796
Query: 2416 W-TSPIPSESGFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQ 2240
W SP S +G+++Y I +D F+ + W+YPLH KSD++ F + + +++++
Sbjct: 797 WGPSPTSSCTGYRFYLIIVDDFTKYSWLYPLHFKSDVFSTLKTFILKLQTLLDLQVQSIR 856
Query: 2239 CDHGGEYDNTRFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPS 2060
D GGE+ N FF GI + SC HTS+QNG +ER L Q+ +P
Sbjct: 857 SDSGGEFLNKSLQSFFNEQGITHQLSCLHTSEQNGCAERKHRHVVEMGRTLLSQSDLPTQ 916
Query: 2059 YWVEALNMAAYLSNILP--STAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYITV--AHK 1892
+WVEA YL N LP S+ I+ P+ L++ SP Y L+ FGC CYP++ K
Sbjct: 917 FWVEAFQTVVYLINRLPPQSSVIS---PWELLFHASPKYHTLKAFGCACYPWLQPYSRDK 973
Query: 1891 LQPRSTACVFLGYPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHYDFLN 1712
L +S CVFLGY NH G+RC D SN++ +SRHV FDE +FP+ SL S H ++
Sbjct: 974 LDFKSKQCVFLGYSLNHSGYRCWDPISNRLYISRHVVFDESLFPYKSLSSQASHHSPCVS 1033
Query: 1711 TTNTIPLPVH-PTPAVINEXXXXXXXXXXXXXTDLHEPLPQPASPNQHTSSPPSVAQSLP 1535
+ P+ +H P P E + P S HT+ P S +SL
Sbjct: 1034 SPLHPPMSLHLPLPVSHLEQQSSPAAALEGR----NASPPSIFSTAAHTTIPSSAQESLH 1089
Query: 1534 TPQADXXXXXXXXXXXXXXXXXXXXXPMVTRAKAGISKP---------LERMNCHVTTVS 1382
TP M+TRAKAGI KP L +T +
Sbjct: 1090 TPPVSSSPAEPPPLPPPIPVNTHT---MITRAKAGIHKPKVFTATKHQLPSTVDSLTALP 1146
Query: 1381 PLPRSHIQALRVPHWKQAMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTL 1202
P P + +QA + HW +AM E+ AL + GTW LVP NIV W+F+ K DGT+
Sbjct: 1147 PTPSTFLQASKSSHWMEAMQFEFQALQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTI 1206
Query: 1201 SRYKARLVANGRSQQQGIDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGD 1022
RYKARLVA G QQ+G+D ETFSPV KP TIR +LS+AVS W IHQLDV NAFLHG
Sbjct: 1207 ERYKARLVAKGFHQQEGLDFSETFSPVAKPTTIRILLSIAVSYYWFIHQLDVSNAFLHGH 1266
Query: 1021 LSETVYMHQPPGFVDPAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDAS 842
L E VYM QPPGFVDP+ P +VC L++SLYGLKQAPRAW++ F + +GF S +D S
Sbjct: 1267 LKEDVYMVQPPGFVDPSKPHHVCKLRKSLYGLKQAPRAWYEAFYTAILSLGFSSSHSDTS 1326
Query: 841 LFVFHRGSDTAYLLLYVDDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRT 662
LF+ R + ++L+YVDDII+T SS T Q +I+ L F + DLG +NYFLGI ++
Sbjct: 1327 LFI-KRDTSITFILVYVDDIIITGSSVTECQSIISQLQTMFPVKDLGDINYFLGIEVHKS 1385
Query: 661 TSGMFLSQSKFAEEILERAHMQKCNPCRTPVDTESKLGPDGTPFDDPTLYRSLAGALQYL 482
G+ L Q+K+A ++L++ M PC TPV T SKL GT DPT YRS GALQYL
Sbjct: 1386 DQGLLLHQAKYALDLLKKTDMLGAKPCATPVST-SKLDHSGTLLSDPTSYRSTVGALQYL 1444
Query: 481 TFTRPDISYAVQQVCLYMHDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDA 302
T+TRPD+++AV QVC YMH P+ H A+KRILRYL+GT+D GL S L A++DA
Sbjct: 1445 TWTRPDLAFAVNQVCQYMHSPQTIHLQAVKRILRYLKGTVDLGLWFTKGSQC-LTAWSDA 1503
Query: 301 DWAGCPVTRRSTSGYCVFLGDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWIRNLL 122
DWAGCPV RRSTSGYCVFLG NL+SWSAK+Q T++RSS EAEYR +AN AE W+ +L
Sbjct: 1504 DWAGCPVDRRSTSGYCVFLGSNLISWSAKKQATVARSSTEAEYRSLANTAAEITWVCKIL 1563
Query: 121 RELHHPLSTATIVYCDNVSAVYLSTNPVQHQRTKHIEID 5
++ PL ++YCDN S + L+ NPV H RTKH+EID
Sbjct: 1564 HDISFPLLKTPVIYCDNKSVIALAFNPVFHARTKHVEID 1602
>gb|OTG14868.1| putative zinc finger, CCHC-type [Helianthus annuus]
Length = 1386
Score = 744 bits (1922), Expect = 0.0
Identities = 406/954 (42%), Positives = 541/954 (56%), Gaps = 43/954 (4%)
Frame = -1
Query: 2737 FSVKDFLTRWVLLRCDSTGDLYPVTQQ-----SSTHPPFALLSFSYTTWHRRLGHPGEDV 2573
F ++D T+ VL R LY + SS+ P A S+ WH RLGH DV
Sbjct: 391 FHIQDRHTKQVLARGRCENGLYILQPGHHALVSSSSRPKA----SFEVWHSRLGHVHFDV 446
Query: 2572 LRRLESSNSISCNKSKLSAL-CHACQLGKQIKLPFHTSESKVASIFDIVHSDVW-TSPIP 2399
+ L+ +S + C CQL K +LPF + + D++H D+W SP+
Sbjct: 447 ISILQKLGILSITSLLPKPVTCRPCQLAKSQRLPFELNNKRALHPLDLIHCDLWGPSPVV 506
Query: 2398 SESGFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEY 2219
S ++YY F+D S F W+YPL KS+ Y +F +V QF IK Q D G E+
Sbjct: 507 SVDNYRYYVAFVDDHSRFCWIYPLRLKSEFYKVLTIFMKFVQTQFSRKIKVFQSDGGTEF 566
Query: 2218 DNTRFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALN 2039
N F G R SCP+T QQNG+ ER +F A +P +WV+A +
Sbjct: 567 VNHNVRSLFEENGTFHRLSCPYTPQQNGRVERKHRHIVETGLAMMFNAKLPSKFWVDAFS 626
Query: 2038 MAAYLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYIT--VAHKLQPRSTACV 1865
A Y+ N LP+ +N + PF L++ +P+Y+ R FGC +PY+ HKL PRS C+
Sbjct: 627 SAVYIINRLPTPLLNGKSPFEVLFSETPNYNVFRAFGCRVFPYLRDYSEHKLAPRSIPCI 686
Query: 1864 FLGYPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQY----TSPHYDFLNTTNTI 1697
F+GY ++G+RCLD +S+++ ++RH RF+E++FPF T P F T
Sbjct: 687 FIGYSPTYKGYRCLDPTSSRVYITRHARFNENIFPFHGTTDNQPFSTLPLTSFDEDTFFT 746
Query: 1696 PLPVHPTPAVINEXXXXXXXXXXXXXTDLH---EPLPQ------PASPNQ---------- 1574
P P P D +P+P+ P SPN
Sbjct: 747 PHTHCPKPTPTPTPTPNLTKTPCHLCMDFPPPPQPIPETTPSSPPPSPNNSTTPNSPLSP 806
Query: 1573 HTSSPPS--VAQSLPTPQADXXXXXXXXXXXXXXXXXXXXXPMVTRAKAGISKPLERMNC 1400
HTS+ P+ ++ +PTP M+TRAKAG+ +P +
Sbjct: 807 HTSTSPTTDISSPIPTPPPPPPPPLPTHP-------------MITRAKAGVFRPRHIADL 853
Query: 1399 HVTTVSPL---------PRSHIQALRVPHWKQAMLDEYNALITNGTWVLVPRPPNVNIVR 1247
T PL P+ A++ W AM E +AL N TW LVPRP N ++V
Sbjct: 854 SHVTRHPLHQALFASNDPKGFKTAIKDAKWSSAMHKELDALYKNNTWSLVPRPVNRHVVG 913
Query: 1246 SMWLFRHKFHADGTLSRYKARLVANGRSQQQGIDCDETFSPVVKPATIRTVLSLAVSRDW 1067
S WLFR K+H+DG++ R+KARLVA G SQ GID TFSPVVK +T+R +LSLA+ DW
Sbjct: 914 SKWLFRTKYHSDGSVERHKARLVAQGFSQFPGIDYSHTFSPVVKASTVRIILSLAILNDW 973
Query: 1066 PIHQLDVKNAFLHGDLSETVYMHQPPGFVDPAHPDYVCHLQRSLYGLKQAPRAWFQRFAG 887
+HQLDV NAFLHG L+E VYM QPPGF++P P++VC L ++LYGLKQAPRAWF R +
Sbjct: 974 RLHQLDVNNAFLHGHLNECVYMEQPPGFINPNFPNHVCKLNKALYGLKQAPRAWFHRLST 1033
Query: 886 FVTRIGFQHSKTDASLFVFHRGSDTAYLLLYVDDIILTASSTTFLQRVITALHGEFAMTD 707
F+ GF+ S+ D SLF+F R + YLL+YVDD+ILT + L+ I LH EFA+ D
Sbjct: 1034 FLISNGFKCSRADPSLFIFKRDNCIMYLLVYVDDLILTGNQDNVLRSFINRLHNEFAIKD 1093
Query: 706 LGSLNYFLGISATRTTSGMFLSQSKFAEEILERAHMQKCNPCRTPVDTESKLGPDGTPFD 527
LG LNYFLG+ T T++G+FL+QSK+A +IL RA M P TP+ T G F
Sbjct: 1094 LGELNYFLGLEVTYTSNGLFLNQSKYASDILVRACMMDAKPATTPLATNVTFSNSGELFS 1153
Query: 526 DPTLYRSLAGALQYLTFTRPDISYAVQQVCLYMHDPRDTHFHALKRILRYLRGTLDHGLQ 347
DPT YRS+ GALQYLT TRPDISYAV QV ++H P HF +KRILRY++GTL GL
Sbjct: 1154 DPTQYRSIVGALQYLTITRPDISYAVNQVSQFLHAPTIDHFQGVKRILRYIKGTLSFGLT 1213
Query: 346 LHVSSTAQLIAYTDADWAGCPVTRRSTSGYCVFLGDNLLSWSAKRQVTLSRSSAEAEYRG 167
S LI ++DADWA C TRRST GY +FLG NL+SWSAK+Q T+SRSS E+EYR
Sbjct: 1214 FSKPSQNTLIGFSDADWARCLETRRSTYGYSIFLGGNLVSWSAKKQPTVSRSSCESEYRA 1273
Query: 166 VANVVAETAWIRNLLRELHHPLSTATIVYCDNVSAVYLSTNPVQHQRTKHIEID 5
+AN AE WI +LLRELH ++ + CDN SA++L+ NPV H+R KH++ID
Sbjct: 1274 MANTAAEIIWITHLLRELHALPASRPTILCDNRSAIFLTQNPVSHKRVKHLDID 1327
>gb|PKU63244.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 953
Score = 721 bits (1862), Expect = 0.0
Identities = 401/909 (44%), Positives = 528/909 (58%), Gaps = 8/909 (0%)
Frame = -1
Query: 2707 VLLRCDSTGDLYPVTQQSSTHPP-FALLSFSYTT--WHRRLGHPGEDVLRRLESSNSISC 2537
+LL LY V SST P ALLS WH RLGHP +L RL +N+
Sbjct: 6 LLLHGPCHNGLYSV---SSTKPQDLALLSIQTVPNLWHSRLGHPAAAILNRLSVNNNHIH 62
Query: 2536 NKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVW-TSPIPSESGFKYYAIFLD 2360
NKS + +C CQL K +L F TS + F++VHSDVW S S G++Y+ F+D
Sbjct: 63 NKSH-NTMCTTCQLAKSKQLYFPTSVTTTTKPFELVHSDVWGPSHTTSIQGYRYFVTFID 121
Query: 2359 HFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEYDNTRFHDFFRTTG 2180
+S F WV+PL QKS+ + F+ F +V F +I ++ D GGEY N F + +T G
Sbjct: 122 DYSRFCWVFPLTQKSEFFHVFVNFHKFVQVHFNANICTIRTDGGGEYLNKNFKLYCKTWG 181
Query: 2179 IQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALNMAAYLSNILPSTA 2000
I ++ CP+TS QNG +ER L Q++ P + WVEAL+ A +L N LP+
Sbjct: 182 IFHQYMCPYTSAQNGVAERKNRHILETIRSLLIQSNTPHTLWVEALHTAIHLINRLPTVT 241
Query: 1999 INNEVPFTKLYNHSPSYDNLRVFGCLCYPYITV--AHKLQPRSTACVFLGYPANHRGFRC 1826
I + PF LY PSY +L+ FGCLC+P++ KL P S CVF+GY N +GFRC
Sbjct: 242 IQYKTPFEMLYQKLPSYTHLKTFGCLCFPWLKPYSKSKLSPLSIPCVFVGYALNQKGFRC 301
Query: 1825 LDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHYDFLNTTNTIPLPVHPTPAVIN--EXX 1652
D ++ +I +SRHV F+E FPF T + + PL + PT +VI
Sbjct: 302 FDPNTQRIFVSRHVIFNETKFPFQDQSLQTHKNNHRVPENQIPPLLLVPTSSVITAGNPT 361
Query: 1651 XXXXXXXXXXXTDLHEPLPQPASPNQHTSSPPSVAQSLPTPQADXXXXXXXXXXXXXXXX 1472
T LH P + TS PSV
Sbjct: 362 NNSNLAIPSQVTQLHSNFPNSSISPTETSQAPSVPVK----------------------- 398
Query: 1471 XXXXXPMVTRAKAGISKPLERMNCHVTTVSPLPRSHIQALRVPHWKQAMLDEYNALITNG 1292
M TR++AGI KP + ++P P S+ +A++ HW+QAM EY AL + G
Sbjct: 399 NLRSHKMQTRSQAGILKPKPVFDLTHQVITPDPTSYKEAVKHEHWRQAMSHEYQALQSQG 458
Query: 1291 TWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARLVANGRSQQQGIDCDETFSPVVKP 1112
TW LVP N NI+ W +R K+ +DGTL+R+KARLVA G +Q+ GID ETFSPV K
Sbjct: 459 TWTLVPPTDNQNILGCKWTYRTKYKSDGTLARHKARLVALGYNQEFGIDYIETFSPVAKI 518
Query: 1111 ATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYMHQPPGFVDPAHPDYVCHLQRSLY 932
T+R +L LA+ W IHQLDV NAFLHG+LSETV+M QP GFVD HP YVC L ++LY
Sbjct: 519 TTVRVLLILALHHQWAIHQLDVSNAFLHGELSETVFMKQPIGFVDNQHPTYVCKLNKALY 578
Query: 931 GLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRGSDTAYLLLYVDDIILTASSTTFL 752
GLKQAPR WF+ GF+ ++ F S +D SL ++ + + Y+L+YVDDII+T ++++ +
Sbjct: 579 GLKQAPRKWFEMLIGFLHQLEFTTSHSDPSLLIYRKDTSKVYVLIYVDDIIVTGNNSSVI 638
Query: 751 QRVITALHGEFAMTDLGSLNYFLGISATRTTSGMFLSQSKFAEEILERAHMQKCNPCRTP 572
+++ L +F M LGSLN FLGI+ T T +GMFL Q+++AE+IL RA MQ P TP
Sbjct: 639 TQLLEQLQHKFKMRKLGSLNQFLGITVTHTPTGMFLQQTRYAEDILARAGMQNSKPVSTP 698
Query: 571 VDTESKLGPDGTPFDDPTLYRSLAGALQYLTFTRPDISYAVQQVCLYMHDPRDTHFHALK 392
+ + F +P LYR L GALQYLT T PDISYAV + C MH PR F ALK
Sbjct: 699 CCIKKASEGNTELFSNPQLYRQLIGALQYLTLTHPDISYAVNRACQQMHQPRINDFDALK 758
Query: 391 RILRYLRGTLDHGLQLHVSSTAQLIAYTDADWAGCPVTRRSTSGYCVFLGDNLLSWSAKR 212
+ILRY+RGT GL ++ SS L + D+DWAG R+ST+GYC FLG +L+SWS K+
Sbjct: 759 QILRYIRGTTQFGLPINGSSLT-LQSNVDSDWAGDHTDRKSTTGYCNFLGTSLISWSVKK 817
Query: 211 QVTLSRSSAEAEYRGVANVVAETAWIRNLLRELHHPLSTATIVYCDNVSAVYLSTNPVQH 32
Q T++RSS EAEYR +A V E W+R LL EL P T YCDN SA+ L+ NPV H
Sbjct: 818 QTTIARSSTEAEYRAIALVTTEIIWLRRLLHELDCPQLEPTKFYCDNTSAIALANNPVYH 877
Query: 31 QRTKHIEID 5
RTKHIEID
Sbjct: 878 ARTKHIEID 886
>gb|PKU68501.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 1035
Score = 720 bits (1859), Expect = 0.0
Identities = 380/932 (40%), Positives = 538/932 (57%), Gaps = 18/932 (1%)
Frame = -1
Query: 2746 PFGFSVKDFLTRWVLLRCDSTGDLYPVT--QQSSTHPPFALLSFSYTTWHRRLGHPGEDV 2573
P GF +KD T+ LL+ LY + +ST + S S WH RLGHP V
Sbjct: 62 PSGFCIKDLQTQATLLQGPCRNGLYTIRIPPPASTSSALSATSSSSYRWHTRLGHPHPQV 121
Query: 2572 LRRLESSN-SISCNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVW-TSPIP 2399
L + +N ++ + S + C C+ K KL F S + ++H DVW +P
Sbjct: 122 LASISQANRDLAISTSVFT--CSTCKAAKSHKLVFPVSSRSNVTPLALLHFDVWGPTPTI 179
Query: 2398 SESGFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEY 2219
S G+KYY + +D FS F W++ L KS++ I F+ ++ Q IK +Q D G E+
Sbjct: 180 SHQGYKYYLVIIDDFSRFTWLFMLRAKSEVPKIIIHFKIFIENQLSHKIKCIQTDGGSEF 239
Query: 2218 DNTRFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALN 2039
N F + GI R SCP+T +QNG +ER L A +P +W +A
Sbjct: 240 TNNELKSFLQNNGIHHRISCPYTPEQNGMAERKNRHIIETTRTLLQTAHLPYQFWPDAAL 299
Query: 2038 MAAYLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYITVA--HKLQPRSTACV 1865
A +L N +PS I N+ PF L+ P+Y +L+ FGC CYP+ + HKL+P+++ C+
Sbjct: 300 TAVHLINRMPSVTIQNKTPFELLHQTKPTYSHLKTFGCACYPWTPPSQRHKLEPKASQCL 359
Query: 1864 FLGYPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFA--SLHQYTSPHYDFLNTTNTIPL 1691
FLGY +++G++CL++S+NKI+ SRHV F+ED+FPF+ H TSP +T + L
Sbjct: 360 FLGYHESYKGYKCLNVSTNKILFSRHVTFEEDLFPFSLSPTHPSTSPSVPASSTNPYLLL 419
Query: 1690 PVHPTPAVINEXXXXXXXXXXXXXTDLHEPLPQPASPNQHTSSPPSVAQSLPTPQADXXX 1511
P T+ QP +P TSSPP + S P
Sbjct: 420 PTSTLSTSHVTHQPSNSPTTPTSPTEQTNLTSQPTTPPHTTSSPPPIPSSHP-------- 471
Query: 1510 XXXXXXXXXXXXXXXXXXPMVTRAKAGISKPLERMNC-----HVTTVSPLPRSHIQALRV 1346
M+TR K G KP +N ++ P P S+ +A+++
Sbjct: 472 -------------------MITRLKTGTLKPRTLLNLLHKLQPISQPLPDPTSYSEAVKI 512
Query: 1345 PHWKQAMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARLVANGR 1166
P W++AM E+ AL GTW+LVP PPN N++ S W +R K+H++GT++RYKARLVA G
Sbjct: 513 PQWREAMALEFLALQQQGTWLLVPPPPNANVLGSRWTYRTKYHSNGTIARYKARLVAQGH 572
Query: 1165 SQQQGIDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYMHQPPG 986
Q+ G+D +TF PV K TIR L +A++ WPIHQ+DV NAFLHGDL ETVYM QP G
Sbjct: 573 RQEHGLDYHDTFCPVAKMPTIRVFLLIALNHSWPIHQMDVANAFLHGDLHETVYMTQPKG 632
Query: 985 FVDPAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRGSDTAY 806
F D +P +VC L++++YGLKQAPR WF +F+ ++ GF+ S++D SLFVF + + Y
Sbjct: 633 FEDNINPSHVCLLKKAIYGLKQAPRQWFHKFSSYIISYGFKQSQSDHSLFVFSQSNIQIY 692
Query: 805 LLLYVDDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSGMFLSQSKFA 626
LL+YVDDI+L+ + + + +I L +F + LG+ ++FLGI T S +FLSQS +A
Sbjct: 693 LLIYVDDILLSGNHSQTVSALINQLSKQFTIKYLGTASHFLGIQIHTTDSSLFLSQSTYA 752
Query: 625 EEILERAHMQKCNPCRTPVDTESKLGPDGTPFDDPTL-----YRSLAGALQYLTFTRPDI 461
+ IL +A + C P P T+ TPF DP L Y+ G+LQYLT TRPDI
Sbjct: 753 KSILHQAGLTACKPLSNPNCTKLPT----TPFSDPILHNPLSYKQFTGSLQYLTITRPDI 808
Query: 460 SYAVQQVCLYMHDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDADWAGCPV 281
SY+V +C +MHDP+ H+H LKR+LRY++GT GL + QL++ +DADWA P+
Sbjct: 809 SYSVNVLCQHMHDPQPVHYHLLKRLLRYIQGTTHFGLPIS-KGPLQLMSMSDADWASDPI 867
Query: 280 TRRSTSGYCVFLGDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWIRNLLRELHHPL 101
TRRSTSGYC FLG L+SWS K+Q T++RSS EAEYR +A A+ W+R LL + + +
Sbjct: 868 TRRSTSGYCSFLGSTLISWSVKKQHTVARSSTEAEYRAIAAATADILWLRKLLHDFNISI 927
Query: 100 STATIVYCDNVSAVYLSTNPVQHQRTKHIEID 5
TI+YCDN+SA+ ++ NPV H RTKHIEID
Sbjct: 928 DQPTILYCDNMSAIAIANNPVLHARTKHIEID 959
>gb|PNX84476.1| hypothetical protein L195_g040537 [Trifolium pratense]
Length = 544
Score = 701 bits (1808), Expect = 0.0
Identities = 338/488 (69%), Positives = 395/488 (80%), Gaps = 4/488 (0%)
Frame = -1
Query: 1453 MVTRAKAGISKPLERMNCHVTT---VSPLPRSHIQALRVPHWKQAMLDEYNALITNGTWV 1283
M TRA+ GI KP + N H ++ +SPLP + + AL P+WK AM DEY+ALI N TW
Sbjct: 1 MTTRAQHGIFKPRQLFNLHTSSSNQISPLPTNPLNALHDPNWKMAMKDEYDALIENKTWD 60
Query: 1282 LVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARLVANGRSQQQGIDCDETFSPVVKPATI 1103
LVPRP N NI+RS+W+FRHK ADG+ RYKARLV NG +QQ G+DC ETFSPVVKPATI
Sbjct: 61 LVPRPSNANIIRSLWIFRHKKKADGSFERYKARLVGNGSNQQTGVDCGETFSPVVKPATI 120
Query: 1102 RTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYMHQPPGFVDPAHPDYVCHLQRSLYGLK 923
RTVLS+A+S+ W +HQLDVKNAFLHG+L+ETVYM+QPPGF DP HPDYVC L++SLYGLK
Sbjct: 121 RTVLSIAISKSWCLHQLDVKNAFLHGNLNETVYMYQPPGFRDPQHPDYVCLLKKSLYGLK 180
Query: 922 QAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRGSDTAYLLLYVDDIILTASSTTFLQRV 743
QAPRAW+QRF FV +GF HS D SLF++H G DTAY+LLYVDDIILT SS T Q +
Sbjct: 181 QAPRAWYQRFTDFVATLGFSHSVCDHSLFIYHHGDDTAYILLYVDDIILTTSSDTLRQSI 240
Query: 742 ITALHGEFAMTDLGSLNYFLGISATRTTSGMFLSQSKFAEEILERAHMQKCNPCRTPVDT 563
++ L EFAM DLG L+YFLGIS TR + GMFLSQ K+AEEI+ERA M C P TPVDT
Sbjct: 241 MSKLSSEFAMKDLGPLSYFLGISVTRHSEGMFLSQQKYAEEIIERAAMSSCKPVSTPVDT 300
Query: 562 ESKL-GPDGTPFDDPTLYRSLAGALQYLTFTRPDISYAVQQVCLYMHDPRDTHFHALKRI 386
++KL G G P+ DP+ YRSLAGALQYLTFTRPDISYAVQQ+CL+MHDP+ H ALKRI
Sbjct: 301 KAKLSGTSGNPYHDPSEYRSLAGALQYLTFTRPDISYAVQQICLFMHDPKTQHMTALKRI 360
Query: 385 LRYLRGTLDHGLQLHVSSTAQLIAYTDADWAGCPVTRRSTSGYCVFLGDNLLSWSAKRQV 206
+RY++GT HGL L SS +L AYTDADW GCP TRRSTSGYCV+LGDNL+SWSAKRQ
Sbjct: 361 IRYIKGTSTHGLHLSPSSIEKLTAYTDADWGGCPDTRRSTSGYCVYLGDNLVSWSAKRQP 420
Query: 205 TLSRSSAEAEYRGVANVVAETAWIRNLLRELHHPLSTATIVYCDNVSAVYLSTNPVQHQR 26
TLSRSSAEAEYRGVANVV+E+ W+RNLL EL P++ AT+VYCDNVSAVYLS NP+QHQR
Sbjct: 421 TLSRSSAEAEYRGVANVVSESCWLRNLLLELQCPVTKATLVYCDNVSAVYLSGNPIQHQR 480
Query: 25 TKHIEIDI 2
TKHIE+DI
Sbjct: 481 TKHIEMDI 488
>gb|PKU65522.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 1382
Score = 730 bits (1885), Expect = 0.0
Identities = 386/925 (41%), Positives = 548/925 (59%), Gaps = 10/925 (1%)
Frame = -1
Query: 2749 DPFGFSVKDFLTRWVLLRCDSTGDLYPVTQQSSTHPPFALLSFSYTT--WHRRLGHPGED 2576
+P GF KD T+ +LL+ LYP+ + + P AL + S WH+RLGHP +
Sbjct: 416 NPAGFVFKDLKTQQILLQGPCNNGLYPIQTAALSIPTQALAATSTDANLWHQRLGHPNDR 475
Query: 2575 VLRRLESSNSISCNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVW-TSPIP 2399
VL++L S++ I C +K C +C+ K KL F S S+ SI D++HSD+W +P+
Sbjct: 476 VLQKL-SNSIIHCRFNKFHISCSSCKESKSHKLVFDKSVSRRNSILDLIHSDIWGPAPVV 534
Query: 2398 SESGFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEY 2219
S GF+YY +F+D FS F W++ + K+++++ F F+ + K IK ++ D G EY
Sbjct: 535 SHHGFRYYVLFVDDFSRFSWIFSIRCKTEVFNVFTAFKNQIEKYTSRSIKMIRTDGGTEY 594
Query: 2218 DNTRFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALN 2039
N F + RT GI + SCP+T +QNG +ER L ASIP +YW EA+
Sbjct: 595 VNHTFTQYMRTHGITHQISCPYTPEQNGVAERKHRHILETSRTLLNTASIPYNYWPEAIL 654
Query: 2038 MAAYLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYITVA--HKLQPRSTACV 1865
+ YL N +PS N PF + P YD+LR FGC C+ + HKLQP+S +CV
Sbjct: 655 TSVYLINRMPSPNTTNLSPFELFHKTQPRYDHLRTFGCECFYLLPPHSHHKLQPKSKSCV 714
Query: 1864 FLGYPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHYDFLNTTNTIPLPV 1685
FLGY ++G++CLDL++NKI +SRH F+E VFPF + SP + T++IP +
Sbjct: 715 FLGYSDTYKGYKCLDLTTNKIHISRHTDFNEHVFPFKN-----SPQSPNIQPTSSIPFLL 769
Query: 1684 HPTPAVINEXXXXXXXXXXXXXTDLHEPLPQPASPNQHTSSPPSVAQSLPTPQADXXXXX 1505
P A N H L ++ T + P+++ +P P
Sbjct: 770 QPISAQDNS----------------HTILGNNSAT---TYAQPTISSQVPQPTQSDISSN 810
Query: 1504 XXXXXXXXXXXXXXXXPMVTRAKAGISKPLERMNC-HVT---TVSPLPRSHIQALRVPHW 1337
M+TRAK G KP R+N H T T+ P S+ +A + W
Sbjct: 811 SNQAEAVHPNSSSTYHHMLTRAKTGSLKPRIRLNLLHSTSQNTIPITPTSYTEAAKQSEW 870
Query: 1336 KQAMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARLVANGRSQQ 1157
+ AM E+ AL GTW LV P + I+ W +R K+HADGT++++KARLVA G Q+
Sbjct: 871 RTAMALEFFALQKQGTWSLVEPPHDATILGCKWTYRIKYHADGTIAKHKARLVAQGNHQE 930
Query: 1156 QGIDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYMHQPPGFVD 977
G+D ETFSPV K TIR +L++A++ +WP+HQLDV NAFLHG++ ET+YM QP GF D
Sbjct: 931 YGLDYTETFSPVAKLPTIRVLLTVALNNEWPVHQLDVANAFLHGNIEETIYMAQPRGFED 990
Query: 976 PAHPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRGSDTAYLLL 797
P+HP +VC L +++YGLKQAPR W+ F ++T IGF H+ D S+ F +LL+
Sbjct: 991 PSHPQHVCRLHKAIYGLKQAPRQWYNTFTSYLTSIGFFHNTADPSMLCFKTNCTQVFLLI 1050
Query: 796 YVDDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSGMFLSQSKFAEEI 617
YVDDI++T ++ T + +I LH +F+M DLG N FLG+ + FLSQ +A +
Sbjct: 1051 YVDDILITGNNQTEISMIIEKLHKQFSMKDLGQANDFLGVKIDTLNNSYFLSQKSYAWSL 1110
Query: 616 LERAHMQKCNPCRTPVDTE-SKLGPDGTPFDDPTLYRSLAGALQYLTFTRPDISYAVQQV 440
L+ A M CNP P T+ + D DPTLYR L GALQYLT TRPDI+Y+V Q+
Sbjct: 1111 LQLAQMTACNPLANPSCTKLPTVFQDDPLLSDPTLYRRLTGALQYLTITRPDIAYSVNQL 1170
Query: 439 CLYMHDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDADWAGCPVTRRSTSG 260
+MH+P H + LKR+LRYL+GTLD+G+ + S+ L +++DADWAG P++RRSTSG
Sbjct: 1171 SQHMHNPLSQHVYLLKRLLRYLKGTLDYGIPISKSNLV-LSSFSDADWAGDPISRRSTSG 1229
Query: 259 YCVFLGDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWIRNLLRELHHPLSTATIVY 80
YC FLG+ ++SW+ K+Q T++RSS E+EYR +A + A+ W+R LL + T +Y
Sbjct: 1230 YCSFLGNTIISWTVKKQHTVARSSTESEYRALAALTADIIWLRRLLADFGINQDEPTDMY 1289
Query: 79 CDNVSAVYLSTNPVQHQRTKHIEID 5
CDN+SA+ L+ NPV H RTKHIEID
Sbjct: 1290 CDNMSAIALANNPVFHARTKHIEID 1314
>gb|PKU86178.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 1017
Score = 718 bits (1853), Expect = 0.0
Identities = 380/924 (41%), Positives = 550/924 (59%), Gaps = 9/924 (0%)
Frame = -1
Query: 2749 DPFGFSVKDFLTRWVLLRCDSTGDLYPV-TQQSSTHPPFALLSFSYTTWHRRLGHPGEDV 2573
D G+++KD T +LLR + LYP+ T+ S + +S + + WHRRLGHP V
Sbjct: 57 DSSGYTIKDPTTNHILLRGQARHGLYPIFTESPSPNTALVAVSSTESLWHRRLGHPSYRV 116
Query: 2572 LRRLESSNSISCNKSKLSALCHACQLGKQIKLPFHTSESKVASIFDIVHSDVW-TSPIPS 2396
L++L+ S + S C+AC+L K KLPF +S S+ +S+ ++HSDVW S + S
Sbjct: 117 LQKLQKYVSPQLSFVSSSFHCNACELAKSHKLPFTSSISRSSSVLQLIHSDVWGPSSVIS 176
Query: 2395 ESGFKYYAIFLDHFSHFVWVYPLHQKSDLYDKFIVFRAYVNKQFGVDIKALQCDHGGEYD 2216
G+KYY IF+D FS F W++PL KS++ F+ F+ V +QF IK + D GGEY
Sbjct: 177 LQGYKYYIIFVDDFSRFSWLFPLTAKSEVPLIFVRFQRLVERQFNAKIKIFRSDGGGEYT 236
Query: 2215 NTRFHDFFRTTGIQFRFSCPHTSQQNGKSERMXXXXXXXXXXXLFQASIPPSYWVEALNM 2036
+ +F T+GI + +CP+T +QNG +ER LF ++IP +W+ A+
Sbjct: 237 SKQFQSLLATSGIVHQLTCPYTPEQNGLAERKHRHIIETTRALLFHSNIPQKFWIHAVQT 296
Query: 2035 AAYLSNILPSTAINNEVPFTKLYNHSPSYDNLRVFGCLCYPYITVA--HKLQPRSTACVF 1862
+L N LPS + P+ L+N P Y++ R+FGCLCYP++ A K P+S CVF
Sbjct: 297 VVHLINRLPSLSNKLSSPYQMLFNKPPDYNSFRIFGCLCYPFLPQAALSKFHPKSIPCVF 356
Query: 1861 LGYPANHRGFRCLDLSSNKIILSRHVRFDEDVFPFASLHQYTSPHYDFLNTTNTIPLPVH 1682
+GYP + +G+ C ++SS K I+SRHV+F E +FPF Q T TT T PL +
Sbjct: 357 VGYPLSSKGYICYNISSGKFIVSRHVKFLETIFPF---QQSTPEPVQSSTTTYTPPLTLV 413
Query: 1681 PT---PAVINEXXXXXXXXXXXXXTDLHEPLPQPASPNQHTSSPPSVAQSLPTPQADXXX 1511
PT P I+ P P P ++ PP+ +LPT +
Sbjct: 414 PTMVQPISIS-------------------PPPSSKLPPPQSTLPPAETATLPT--SSTAE 452
Query: 1510 XXXXXXXXXXXXXXXXXXPMVTRAKAGISKPLERMNCHVTTVSPLPRSHIQALRVPHWKQ 1331
PM+TR++ G KP ++ + + P + QA++ W+Q
Sbjct: 453 LPQSSPVIEPPASEIPSHPMLTRSRTGNLKPKHILSMNHFHIPVDPTCYSQAVKSSAWRQ 512
Query: 1330 AMLDEYNALITNGTWVLVPRPPNVNIVRSMWLFRHKFHADGTLSRYKARLVANGRSQQQG 1151
AM E+ AL GTW LVP P+ N++ W+++ K ++DG+++R+KARLVA G QQ G
Sbjct: 513 AMSAEFEALQHQGTWQLVPPHPSQNVLSCKWIYKSKLNSDGSIARHKARLVARGCHQQYG 572
Query: 1150 IDCDETFSPVVKPATIRTVLSLAVSRDWPIHQLDVKNAFLHGDLSETVYMHQPPGFVDPA 971
+D ++TFSPV K TIR L +AV+ W I QLDV NAFLHG L +TV+M QP GFVDP+
Sbjct: 573 LDYEDTFSPVAKLPTIRIFLKVAVTHHWQILQLDVSNAFLHGRLHDTVFMTQPQGFVDPS 632
Query: 970 HPDYVCHLQRSLYGLKQAPRAWFQRFAGFVTRIGFQHSKTDASLFVFHRGSDTAYLLLYV 791
PD+VC L++++YGLKQ+PR WF+ F+ ++ GF HS D SL ++ R S Y+L+YV
Sbjct: 633 FPDHVCLLKKAIYGLKQSPRKWFETFSTYLLNFGFTHSTADPSLLLYCRNSIHIYILVYV 692
Query: 790 DDIILTASSTTFLQRVITALHGEFAMTDLGSLNYFLGISATRTTSGMFLSQSKFAEEILE 611
DDI+LT + +++++ L EF M +LG ++YFLGI T+ G+ LSQS +A ++L
Sbjct: 693 DDILLTGNHNPTIEKLLLGLSTEFHMKNLGQVSYFLGIQILHTSDGLHLSQSSYARDLLT 752
Query: 610 RAHMQKCNPCRTPVDTE--SKLGPDGTPFDDPTLYRSLAGALQYLTFTRPDISYAVQQVC 437
RA M +C P +P+ T+ S P D +R L G+LQYLT TRPDIS+ V ++C
Sbjct: 753 RAGMTECKPISSPIPTKVLSSSAHLLVP-ADAEQFRHLVGSLQYLTITRPDISFTVNKLC 811
Query: 436 LYMHDPRDTHFHALKRILRYLRGTLDHGLQLHVSSTAQLIAYTDADWAGCPVTRRSTSGY 257
+MH P + F LKR+LRY++GT+ GL + S + +LIAY+D+DWAG P R+STSGY
Sbjct: 812 QHMHQPLEDDFKLLKRLLRYIKGTIFFGLPVR-SGSHELIAYSDSDWAGDPSNRKSTSGY 870
Query: 256 CVFLGDNLLSWSAKRQVTLSRSSAEAEYRGVANVVAETAWIRNLLRELHHPLSTATIVYC 77
C FLGD L+SW K+Q T++RSS EAEYR +A + W+R LL E H + T++ C
Sbjct: 871 CAFLGDTLISWFVKKQKTVARSSTEAEYRALATAATDLIWLRRLLAEFHISSTKPTLLLC 930
Query: 76 DNVSAVYLSTNPVQHQRTKHIEID 5
DN+S + L+ NP+ H RTKH+EID
Sbjct: 931 DNISVIALAHNPIFHARTKHVEID 954