BLASTX nr result
ID: Chrysanthemum22_contig00004186
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00004186
(2006 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_022035408.1| RNA polymerase sigma factor sigB-like [Helia... 799 0.0
ref|XP_021980822.1| RNA polymerase sigma factor sigB-like [Helia... 786 0.0
ref|XP_023742571.1| RNA polymerase sigma factor sigB [Lactuca sa... 765 0.0
gb|PLY96682.1| hypothetical protein LSAT_7X33460 [Lactuca sativa] 755 0.0
gb|KVH89314.1| RNA polymerase sigma-70, partial [Cynara carduncu... 716 0.0
ref|XP_022896521.1| RNA polymerase sigma factor sigB-like [Olea ... 447 e-146
ref|XP_017627350.1| PREDICTED: RNA polymerase sigma factor sigB ... 427 e-139
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-... 418 e-135
ref|XP_018817643.1| PREDICTED: RNA polymerase sigma factor sigB ... 411 e-132
ref|XP_017623577.1| PREDICTED: RNA polymerase sigma factor sigB-... 410 e-132
ref|XP_018817642.1| PREDICTED: RNA polymerase sigma factor sigB ... 410 e-132
ref|XP_017219646.1| PREDICTED: RNA polymerase sigma factor sigB-... 410 e-132
ref|XP_017245405.1| PREDICTED: RNA polymerase sigma factor sigB-... 404 e-130
gb|KZM96906.1| hypothetical protein DCAR_015732 [Daucus carota s... 398 e-127
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ... 392 e-125
ref|XP_023000238.1| RNA polymerase sigma factor sigB [Cucurbita ... 389 e-124
ref|XP_011623893.1| RNA polymerase sigma factor sigB [Amborella ... 386 e-123
gb|ERM94758.1| hypothetical protein AMTR_s00011p00258380 [Ambore... 386 e-123
gb|KJB46071.1| hypothetical protein B456_007G347300 [Gossypium r... 381 e-123
ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB ... 383 e-121
>ref|XP_022035408.1| RNA polymerase sigma factor sigB-like [Helianthus annuus]
gb|OTG29020.1| putative RNA polymerase sigma-70 region 1.2 [Helianthus annuus]
Length = 592
Score = 799 bits (2063), Expect = 0.0
Identities = 429/595 (72%), Positives = 461/595 (77%), Gaps = 4/595 (0%)
Frame = +2
Query: 191 KNMSCLLPQFKCLPDSFSIQFKTTLHSNNIPKCREPTFFPTRCILSTTAPPVSSTETTIL 370
+NMSCLLPQFKCLPDSFSI FKT H +N+ KCREPT PT+CILSTTAPPVS+ E+T+L
Sbjct: 11 QNMSCLLPQFKCLPDSFSIPFKTHNHHSNLSKCREPTVSPTQCILSTTAPPVSA-ESTVL 69
Query: 371 NXXXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXAGVLDIENFKLPSLESHTNSTS 550
+ +HSNSG ADRQW GVLDIENFKLPSL+SHTNS +
Sbjct: 70 SLEKLHLSSLE------LHSNSGTADRQWLSSSSSSSSTGVLDIENFKLPSLDSHTNSIT 123
Query: 551 GNRPWAYSSGAVGQGTSLPSEFVTTEYXXXXXXXXXXXXXXXXXXXXXXXMMMN--HQTP 724
G+RPWAY +GT+LPSEF T EY M MN H P
Sbjct: 124 GSRPWAY------KGTALPSEFTTKEYTDAAAEAVALAKAAVEVAKSAATMAMNMNHLQP 177
Query: 725 KPLITKSVPTVPEFDNSINDLGSLPSDVDEPTAXXXXXXXXXXSASIAVRSKRQVXXXXX 904
KPL K P + E DNSIN LG S+ EPT SA+IAVRSKRQV
Sbjct: 178 KPLDIKEEPKLSEPDNSINGLGPQVSEEMEPTMEELKLLEEQLSANIAVRSKRQVERKER 237
Query: 905 XXXXXXXXXXGIVSVKSAGRRV--AASTVTVKPGLSRRRGEKKDVLAFLGGMTNAKLLTA 1078
G +SVK+AG R A TV VKPG+SRRR EKKDVLAFLGGMTNAKLLTA
Sbjct: 238 RIRAAERAEAGSLSVKTAGGRGRGAGGTVAVKPGVSRRRAEKKDVLAFLGGMTNAKLLTA 297
Query: 1079 AEEVELSKGIQDLLKLQEVHKELTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDK 1258
AEEVELSKGIQDLLKLQEVHKEL TRFGV PTFAEWA AA IDQ+QLGRRLHYGEECRDK
Sbjct: 298 AEEVELSKGIQDLLKLQEVHKELETRFGVPPTFAEWATAAGIDQVQLGRRLHYGEECRDK 357
Query: 1259 MIRSNIRLVISVARGYYGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQA 1438
M+RSNIRLVISVAR YYGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQA
Sbjct: 358 MVRSNIRLVISVARSYYGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQA 417
Query: 1439 VQRSRAEQSRIIHVPYYMVEVQAKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAE 1618
VQRSRAEQSRIIHVPYYMVEVQ+KVNEA+ RLDK+LGR+PTRAEIAVETG+SIKRIQSAE
Sbjct: 418 VQRSRAEQSRIIHVPYYMVEVQSKVNEARQRLDKQLGRKPTRAEIAVETGISIKRIQSAE 477
Query: 1619 DAPRPARSLDIPVGIDNNTKLTDILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLV 1798
AP+PARS+DIPVG DN TKLTD++DDPDQETPEEILIKQTMSEDLEKVL TL EKEQ V
Sbjct: 478 HAPKPARSIDIPVGFDNKTKLTDLIDDPDQETPEEILIKQTMSEDLEKVLGTLNEKEQKV 537
Query: 1799 IRWRFGLEDGKSRTLQEIGDVMGVSRERVRQIELCAFRKLRNTDRTESLRQYLPQ 1963
IRWRFGLEDGK+RTLQEIGDVMGVSRERVRQIEL AFRKLRNTDRTE LRQYLPQ
Sbjct: 538 IRWRFGLEDGKTRTLQEIGDVMGVSRERVRQIELYAFRKLRNTDRTEILRQYLPQ 592
>ref|XP_021980822.1| RNA polymerase sigma factor sigB-like [Helianthus annuus]
gb|OTG37710.1| putative RNA polymerase sigma-70 like domain, RNA polymerase sigma
factor, SigB/C/D/F, plastid [Helianthus annuus]
Length = 610
Score = 786 bits (2030), Expect = 0.0
Identities = 423/609 (69%), Positives = 467/609 (76%), Gaps = 6/609 (0%)
Frame = +2
Query: 155 HHHYMYTSI-AADKNMSCLLPQFKCLPDSFSIQFKT-TLHSNNIPKCREPTFFPTRCILS 328
HHH+MY SI + +NMSCLLPQFK +PDSFS+QFK+ HS+N+P+CR P FF TRCILS
Sbjct: 10 HHHHMYASIPSVAQNMSCLLPQFKWVPDSFSVQFKSHNHHSSNLPRCRGPVFFLTRCILS 69
Query: 329 TTAPPVSSTETTILNXXXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXAGVLDIEN 508
TTAPPVS TE+T+L V S+S AADRQW GVLDIE
Sbjct: 70 TTAPPVS-TESTVLKLEKLQLSSLE------VRSDSAAADRQWSSSSSTTTTTGVLDIEK 122
Query: 509 FKLPSLESHTNSTSGNRPWAYSS--GAVGQGTSLPSEFVTTEYXXXXXXXXXXXXXXXXX 682
FKLPSL+SH NS++G+ WA S G V +GT+LPSE T+E
Sbjct: 123 FKLPSLDSHANSSAGSSSWANDSAVGQVNKGTTLPSELTTSE-CVAAAEAIALARAAVKV 181
Query: 683 XXXXXXMMMNHQTPKPLITKSVPTVPEFDNSINDLGSLPSDVDEPTAXXXXXXXXXXSAS 862
MMMNHQ PK L T P PE DN+I+ +GS S+ EPT+ SAS
Sbjct: 182 AKSAAEMMMNHQRPKTLDTNEKPKSPEPDNTIDGIGSQISEETEPTSEELKLLEEQLSAS 241
Query: 863 IAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSAGRRV--AASTVTVKPGLSRRRGEKKDVL 1036
IAVRSKRQV VS+KS G R AASTV VKPG SRRRG+KKDV
Sbjct: 242 IAVRSKRQVERKERRIRAAERAEASSVSMKSMGGRGRGAASTVAVKPGASRRRGDKKDVF 301
Query: 1037 AFLGGMTNAKLLTAAEEVELSKGIQDLLKLQEVHKELTTRFGVEPTFAEWAAAAHIDQIQ 1216
AFLGGMTNAKLLTAAEEVELSKGIQ LLKLQEVHK+L RFGV PTFAEWAAA IDQIQ
Sbjct: 302 AFLGGMTNAKLLTAAEEVELSKGIQSLLKLQEVHKQLEARFGVPPTFAEWAAALGIDQIQ 361
Query: 1217 LGRRLHYGEECRDKMIRSNIRLVISVARGYYGTKVHLQDIVQEGIRGLVKSAEKFDASKG 1396
LGRRLHYGEECRDKMIRSNIRLVISVAR YYGTKVHLQDIVQEGIRGLVKSAEKFDASKG
Sbjct: 362 LGRRLHYGEECRDKMIRSNIRLVISVARSYYGTKVHLQDIVQEGIRGLVKSAEKFDASKG 421
Query: 1397 FKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQAKVNEAKYRLDKKLGRRPTRAEIA 1576
FKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQ+KVNEAK+RLDK+LGR+PTRAEIA
Sbjct: 422 FKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQSKVNEAKHRLDKELGRKPTRAEIA 481
Query: 1577 VETGLSIKRIQSAEDAPRPARSLDIPVGIDNNTKLTDILDDPDQETPEEILIKQTMSEDL 1756
++TGLS+K+IQSAE AP+PARS+DIP+G DN TKLTD++DDPDQETPEE+LI+QTMSEDL
Sbjct: 482 IDTGLSVKKIQSAEQAPKPARSIDIPIGFDNKTKLTDLIDDPDQETPEEVLIRQTMSEDL 541
Query: 1757 EKVLCTLGEKEQLVIRWRFGLEDGKSRTLQEIGDVMGVSRERVRQIELCAFRKLRNTDRT 1936
KVL TL EKEQ VIRWRFGLEDGK+RTLQEIGDVMGVSRERVRQIEL AFRKLRNTDR
Sbjct: 542 GKVLSTLNEKEQKVIRWRFGLEDGKTRTLQEIGDVMGVSRERVRQIELNAFRKLRNTDRA 601
Query: 1937 ESLRQYLPQ 1963
E+LRQYLPQ
Sbjct: 602 ETLRQYLPQ 610
>ref|XP_023742571.1| RNA polymerase sigma factor sigB [Lactuca sativa]
Length = 599
Score = 765 bits (1975), Expect = 0.0
Identities = 421/612 (68%), Positives = 459/612 (75%), Gaps = 9/612 (1%)
Frame = +2
Query: 155 HHHYMYTSIA-ADKNMSCLLPQFKCLPDSFSIQFKT-TLHSNNIPKCREPTFFPTRCILS 328
+ HYM+ SI+ +NMSCLLPQFKC+PDSF+IQFKT HS N+PKCREP FFPTRC+LS
Sbjct: 9 YDHYMFASISPVAENMSCLLPQFKCIPDSFTIQFKTHNHHSPNLPKCREPIFFPTRCVLS 68
Query: 329 TTAPPVSSTETTILNXXXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXA---GVLD 499
TTAPPVS TE+T+LN VHSNS A DR W + GVLD
Sbjct: 69 TTAPPVS-TESTVLNLEKLKLSSLE------VHSNSTATDRHWSSSSSSSSSSSSTGVLD 121
Query: 500 IENFKLPSLESHTNSTSGNRPWAYSSGAVGQG---TSLPSEFVTTEYXXXXXXXXXXXXX 670
IENF+LPSLE HTNS G+RPWAY++ V QG T+LPSE TTEY
Sbjct: 122 IENFQLPSLEPHTNSIGGSRPWAYTA-KVNQGNTGTTLPSELKTTEYTEAAAEAVALAKA 180
Query: 671 XXXXXXXXXXMMMNHQTPKPLITKSVPTVPEFDNSINDLGSLPSDVDEPTAXXXXXXXXX 850
MM H TP ++SI + G S+ PT
Sbjct: 181 ALKLAKTAAAMMTPHHTPD-------------NHSIPECGPQLSEEVGPTPEELELLEEQ 227
Query: 851 XSASIAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSAGR-RVAASTVTVKPGLSRRRGEKK 1027
SASIAVRSKRQV G+VSVKS R R S+ VKPG+SRRRGEKK
Sbjct: 228 LSASIAVRSKRQVERKARRLRATEKAEAGVVSVKSGSRNRGRPSSAAVKPGVSRRRGEKK 287
Query: 1028 DVLAFLGGMTNAKLLTAAEEVELSKGIQDLLKLQEVHKELTTRFGVEPTFAEWAAAAHID 1207
DVLAFLGGMTNAKLLTA EEVELSKGIQDLLKLQEVHK+L +FGV PTFAEWAAAA ID
Sbjct: 288 DVLAFLGGMTNAKLLTADEEVELSKGIQDLLKLQEVHKQLAAQFGVPPTFAEWAAAAGID 347
Query: 1208 QIQLGRRLHYGEECRDKMIRSNIRLVISVARGYYGTKVHLQDIVQEGIRGLVKSAEKFDA 1387
QIQLGRRLH+GEECRDKMIRSNIRLVISVAR YYGTKVHLQDIVQEGIRGLVKSAEKFDA
Sbjct: 348 QIQLGRRLHHGEECRDKMIRSNIRLVISVARSYYGTKVHLQDIVQEGIRGLVKSAEKFDA 407
Query: 1388 SKGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQAKVNEAKYRLDKKLGRRPTRA 1567
SKGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQA+VNEAKYRL+KKLGR TRA
Sbjct: 408 SKGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQARVNEAKYRLNKKLGRAATRA 467
Query: 1568 EIAVETGLSIKRIQSAEDAPRPARSLDIPVGIDNNTKLTDILDDPDQETPEEILIKQTMS 1747
EIAVETG S+KRIQSAE AP+PARSLD+ VG +NNTKLTD++DDPDQETPEEILIKQTMS
Sbjct: 468 EIAVETGFSVKRIQSAEVAPKPARSLDVRVGFENNTKLTDLIDDPDQETPEEILIKQTMS 527
Query: 1748 EDLEKVLCTLGEKEQLVIRWRFGLEDGKSRTLQEIGDVMGVSRERVRQIELCAFRKLRNT 1927
EDL+KVL TL KEQ VIRWRFGLEDG++RTLQEIGDVMGVSRERVRQIEL AFRKLRNT
Sbjct: 528 EDLDKVLNTLNVKEQQVIRWRFGLEDGRTRTLQEIGDVMGVSRERVRQIELYAFRKLRNT 587
Query: 1928 DRTESLRQYLPQ 1963
D TE+LRQYLPQ
Sbjct: 588 DETETLRQYLPQ 599
>gb|PLY96682.1| hypothetical protein LSAT_7X33460 [Lactuca sativa]
Length = 576
Score = 755 bits (1949), Expect = 0.0
Identities = 415/597 (69%), Positives = 449/597 (75%), Gaps = 8/597 (1%)
Frame = +2
Query: 197 MSCLLPQFKCLPDSFSIQFKT-TLHSNNIPKCREPTFFPTRCILSTTAPPVSSTETTILN 373
MSCLLPQFKC+PDSF+IQFKT HS N+PKCREP FFPTRC+LSTTAPPVS TE+T+LN
Sbjct: 1 MSCLLPQFKCIPDSFTIQFKTHNHHSPNLPKCREPIFFPTRCVLSTTAPPVS-TESTVLN 59
Query: 374 XXXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXA---GVLDIENFKLPSLESHTNS 544
VHSNS A DR W + GVLDIENF+LPSLE HTNS
Sbjct: 60 LEKLKLSSLE------VHSNSTATDRHWSSSSSSSSSSSSTGVLDIENFQLPSLEPHTNS 113
Query: 545 TSGNRPWAYSSGAVGQG---TSLPSEFVTTEYXXXXXXXXXXXXXXXXXXXXXXXMMMNH 715
G+RPWAY++ V QG T+LPSE TTEY MM H
Sbjct: 114 IGGSRPWAYTA-KVNQGNTGTTLPSELKTTEYTEAAAEAVALAKAALKLAKTAAAMMTPH 172
Query: 716 QTPKPLITKSVPTVPEFDNSINDLGSLPSDVDEPTAXXXXXXXXXXSASIAVRSKRQVXX 895
TP ++SI + G S+ PT SASIAVRSKRQV
Sbjct: 173 HTPD-------------NHSIPECGPQLSEEVGPTPEELELLEEQLSASIAVRSKRQVER 219
Query: 896 XXXXXXXXXXXXXGIVSVKSAGR-RVAASTVTVKPGLSRRRGEKKDVLAFLGGMTNAKLL 1072
G+VSVKS R R S+ VKPG+SRRRGEKKDVLAFLGGMTNAKLL
Sbjct: 220 KARRLRATEKAEAGVVSVKSGSRNRGRPSSAAVKPGVSRRRGEKKDVLAFLGGMTNAKLL 279
Query: 1073 TAAEEVELSKGIQDLLKLQEVHKELTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECR 1252
TA EEVELSKGIQDLLKLQEVHK+L +FGV PTFAEWAAAA IDQIQLGRRLH+GEECR
Sbjct: 280 TADEEVELSKGIQDLLKLQEVHKQLAAQFGVPPTFAEWAAAAGIDQIQLGRRLHHGEECR 339
Query: 1253 DKMIRSNIRLVISVARGYYGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIR 1432
DKMIRSNIRLVISVAR YYGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIR
Sbjct: 340 DKMIRSNIRLVISVARSYYGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIR 399
Query: 1433 QAVQRSRAEQSRIIHVPYYMVEVQAKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQS 1612
QAVQRSRAEQSRIIHVPYYMVEVQA+VNEAKYRL+KKLGR TRAEIAVETG S+KRIQS
Sbjct: 400 QAVQRSRAEQSRIIHVPYYMVEVQARVNEAKYRLNKKLGRAATRAEIAVETGFSVKRIQS 459
Query: 1613 AEDAPRPARSLDIPVGIDNNTKLTDILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQ 1792
AE AP+PARSLD+ VG +NNTKLTD++DDPDQETPEEILIKQTMSEDL+KVL TL KEQ
Sbjct: 460 AEVAPKPARSLDVRVGFENNTKLTDLIDDPDQETPEEILIKQTMSEDLDKVLNTLNVKEQ 519
Query: 1793 LVIRWRFGLEDGKSRTLQEIGDVMGVSRERVRQIELCAFRKLRNTDRTESLRQYLPQ 1963
VIRWRFGLEDG++RTLQEIGDVMGVSRERVRQIEL AFRKLRNTD TE+LRQYLPQ
Sbjct: 520 QVIRWRFGLEDGRTRTLQEIGDVMGVSRERVRQIELYAFRKLRNTDETETLRQYLPQ 576
>gb|KVH89314.1| RNA polymerase sigma-70, partial [Cynara cardunculus var. scolymus]
Length = 646
Score = 716 bits (1847), Expect = 0.0
Identities = 392/611 (64%), Positives = 443/611 (72%), Gaps = 10/611 (1%)
Frame = +2
Query: 161 HYMYTSIAADKNMSCLLPQFKCLPDSFSIQFKT-TLHSNNIPKCREPTFFPTRCILSTTA 337
HYMY SIA +NMSCLLPQFKCLPDSFSIQFKT HS +PKCREPTFFPTRCILSTTA
Sbjct: 64 HYMYASIA--ENMSCLLPQFKCLPDSFSIQFKTLNHHSPQLPKCREPTFFPTRCILSTTA 121
Query: 338 PPVSSTETTILNXXXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXAGVLDIENFKL 517
PP ST++T+LN VHSNSG A+RQW AGVLDIENF+L
Sbjct: 122 PP-PSTDSTVLNLEKLQLSSLE------VHSNSGGAERQWSSSASSTT-AGVLDIENFQL 173
Query: 518 PSLESHTNSTSGNRPWAYSSGAVGQ------GTSLPSEFVTTEYXXXXXXXXXXXXXXXX 679
PS+ESHT+S G+RPW Y G+VG+ G + PSEF T+EY
Sbjct: 174 PSIESHTSSVVGSRPWVYP-GSVGRSIEGDIGATSPSEFATSEYAAAAAEAIALAKAAVK 232
Query: 680 XXXXXXXMMMNHQTPKPLITKSVPTVPEFDNSINDLGSLPSDVDEPTAXXXXXXXXXXSA 859
MM+NH K L KS P + E DNS+N GS S+ EPT+ S+
Sbjct: 233 VAKSAAAMMLNHHNTKALDIKSTPNISESDNSVNVTGSQTSEETEPTSEELEILEAQLSS 292
Query: 860 SIAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSAGR---RVAASTVTVKPGLSRRRGEKKD 1030
I VRSKRQV GIVSV SA R AS + +P RRR K D
Sbjct: 293 IITVRSKRQVERKARRMRAAEKAEAGIVSVNSAAMSRVRAGASAASARPSAGRRRSGK-D 351
Query: 1031 VLAFLGGMTNAKLLTAAEEVELSKGIQDLLKLQEVHKELTTRFGVEPTFAEWAAAAHIDQ 1210
VLAFLGGMT+AKLLTAAEEVELSKGIQDL+KLQE+HK+L RFGV PTFAEWAAAA DQ
Sbjct: 352 VLAFLGGMTSAKLLTAAEEVELSKGIQDLMKLQEIHKDLEKRFGVPPTFAEWAAAAGTDQ 411
Query: 1211 IQLGRRLHYGEECRDKMIRSNIRLVISVARGYYGTKVHLQDIVQEGIRGLVKSAEKFDAS 1390
I LGRR+H+GEECRDKMIRSNIRLVISVAR +YGTKVHLQDI+QEGI+GLVKSAEKFDAS
Sbjct: 412 ISLGRRVHHGEECRDKMIRSNIRLVISVARSFYGTKVHLQDIIQEGIQGLVKSAEKFDAS 471
Query: 1391 KGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQAKVNEAKYRLDKKLGRRPTRAE 1570
KGFKFSTYAHWWIRQAVQRS +Q+KVNEAK+RLD++LGR+PTR E
Sbjct: 472 KGFKFSTYAHWWIRQAVQRS----------------LQSKVNEAKHRLDRELGRKPTREE 515
Query: 1571 IAVETGLSIKRIQSAEDAPRPARSLDIPVGIDNNTKLTDILDDPDQETPEEILIKQTMSE 1750
IA+ETG+SIKRIQ+AE AP+PA+SLDI VG+D + KLTD++ DPDQETPEEIL KQ MS+
Sbjct: 516 IAIETGISIKRIQAAELAPKPAQSLDINVGLDGSLKLTDLIHDPDQETPEEILFKQHMSD 575
Query: 1751 DLEKVLCTLGEKEQLVIRWRFGLEDGKSRTLQEIGDVMGVSRERVRQIELCAFRKLRNTD 1930
DL+KVL TL EKEQLVIRWRFGLEDGK+RTLQEIGDVMGVSRERVRQIELC FRKLRNT
Sbjct: 576 DLQKVLNTLSEKEQLVIRWRFGLEDGKTRTLQEIGDVMGVSRERVRQIELCGFRKLRNTK 635
Query: 1931 RTESLRQYLPQ 1963
RTE+LRQYLP+
Sbjct: 636 RTEALRQYLPE 646
>ref|XP_022896521.1| RNA polymerase sigma factor sigB-like [Olea europaea var. sylvestris]
Length = 601
Score = 447 bits (1151), Expect = e-146
Identities = 275/631 (43%), Positives = 366/631 (58%), Gaps = 44/631 (6%)
Frame = +2
Query: 197 MSCLLPQFKCLPDSFSIQFKTTLHSNNIP-KCREPTFFPTRCILSTTAPPVSSTETTILN 373
MSCL+PQF+CLPD+FS+ FK+ HS+ P K R+P +F T+CILST V E L
Sbjct: 1 MSCLVPQFRCLPDTFSVNFKSQNHSSTHPAKSRDPIYFRTQCILSTATTTVLELEKLQL- 59
Query: 374 XXXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXAGVLDIENFKLPSLESHTNSTSG 553
V SNS ADR + VLD++ KLPSL+ H+NS +
Sbjct: 60 ------------PSLEVISNSVPADRS-----SKPTRSAVLDLDKLKLPSLDVHSNSIAA 102
Query: 554 NRPWAYSSGAVG------QGTSLPSEFVTTE--YXXXXXXXXXXXXXXXXXXXXXXXMMM 709
NR W Y Q T +T E MM+
Sbjct: 103 NRTWTYIEAVCPPTEANLQATLATETLITIEEAVVAAAAAEALALAKAAVKVAKDAAMMV 162
Query: 710 NHQTPKPLITKSVPTVPEFDNSI---NDLGSLPSDVD----------------------- 811
++T ++ +PE DN + N L + V+
Sbjct: 163 CNRTAMMSDCETTEIMPEVDNLLLERNQLANFSERVNGRESKVTVGLGENHSASFLLTES 222
Query: 812 --EPTAXXXXXXXXXXSASIAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSAGRRVAASTV 985
EP+ S SIAVRSKRQ+ A ++ AA+ V
Sbjct: 223 DVEPSHEELELLKAQLSRSIAVRSKRQIERKARRTR--------------AAQKAAANVV 268
Query: 986 TVKPG-LSRRRGEKKDV-----LAFLGGMTNA-KLLTAAEEVELSKGIQDLLKLQEVHKE 1144
VK G SR++G +D+ L +L G T++ KLLTAAEE +LS GIQDLLKL+ + KE
Sbjct: 269 CVKSGSTSRKKGVLQDIDYSDPLRYLRGTTSSSKLLTAAEEQKLSVGIQDLLKLERLQKE 328
Query: 1145 LTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISVARGYYGTKVH 1324
LT R+G + TFA+WAAAA +DQ L RL+YG C+DKMI+SNIRLVIS+A+ Y G ++
Sbjct: 329 LTERYGDQFTFAQWAAAASVDQKTLRERLNYGILCKDKMIKSNIRLVISIAKYYQGVGMN 388
Query: 1325 LQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQ 1504
LQD+VQEG RGLV+ AEKFDASKGFKFSTYAHWWI+QAV++S ++QSR I +P++MVE
Sbjct: 389 LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 448
Query: 1505 AKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIPVGIDNNTKLT 1684
KV EA+ +L + GR+P E+A TGLS+KR+ + P+ RSLD +GI+ N K +
Sbjct: 449 YKVKEARKQLFNENGRQPDNEEVAEATGLSMKRLNAVLFTPKAPRSLDQKIGINQNLKPS 508
Query: 1685 DILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKSRTLQEIGDVM 1864
+I+ DP+ ET E++LIK+ M +DL KVL TL +E+ VIRWRFGLEDG+ +TLQEIG++M
Sbjct: 509 EIIADPEAETAEDLLIKEFMKQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGELM 568
Query: 1865 GVSRERVRQIELCAFRKLRNTDRTESLRQYL 1957
GVSRER+RQIE CAFRKL+N RT+ L+QY+
Sbjct: 569 GVSRERIRQIESCAFRKLKNKKRTKHLQQYV 599
>ref|XP_017627350.1| PREDICTED: RNA polymerase sigma factor sigB [Gossypium arboreum]
gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
Length = 578
Score = 427 bits (1098), Expect = e-139
Identities = 265/631 (41%), Positives = 358/631 (56%), Gaps = 44/631 (6%)
Frame = +2
Query: 197 MSCLLPQFKCLPDSFSIQFKTTLHSNNIPKCREPTFFPTRCILSTTAPPVSSTETTILNX 376
MSCLLPQFKC PD+FSIQF+ H ++ K +E F ++C+LSTT+ +ST TT
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRA--HHSHHSKHKESICFRSQCVLSTTSS--TSTATT---- 52
Query: 377 XXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXAGVLDIENFKLPSLESHTNSTSGN 556
VLD+E +LPS E+H+NS +
Sbjct: 53 -------------------------------------AVLDVEKLRLPSFEAHSNSVVTD 75
Query: 557 RPWAYSSGAVGQ------GTSLPSEFVTTE----YXXXXXXXXXXXXXXXXXXXXXXXMM 706
RPW Y+ GA G G +L +E + T M+
Sbjct: 76 RPWTYT-GATGPPSEASFGATLATENLLTSDEAVIAAAAAEAVALARAAAKVAKDAAIMV 134
Query: 707 MNHQTPKP------------------LITKS--VPTVPEF--------DNSINDLGSLPS 802
NH + K L T++ V ++ ++ + S
Sbjct: 135 KNHSSAKTEMKSPGSSATDTLTSKWGLFTEAERAGIVGDYVSDELEMEEDDFEQNSTKES 194
Query: 803 DVDEPTAXXXXXXXXXXSASIAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSAGRRVAAST 982
D EPT S SIAVRS RQ +VSVKS
Sbjct: 195 DELEPTNEELKLLEEQLSRSIAVRSNRQPERKAKRTRAAEKAATNVVSVKSGSTN----- 249
Query: 983 VTVKPGLSRRRGEKKDV-----LAFLGGMTN-AKLLTAAEEVELSKGIQDLLKLQEVHKE 1144
+RRG +D+ L +L G TN +KLLTA EE+ELS+GIQDLLKL+ +H+E
Sbjct: 250 -------RKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKLEVLHEE 302
Query: 1145 LTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISVARGYYGTKVH 1324
L R G PTFA+WAAAA +D+ L RL+YG C+DKMI+SNIRLVIS+A+ Y G ++
Sbjct: 303 LAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICKDKMIKSNIRLVISIAKNYQGAGMN 362
Query: 1325 LQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQ 1504
LQD+VQEG RGL++ AEKFDASKGFKFSTYAHWWI+QAV++S ++QSR I +P++MVE
Sbjct: 363 LQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 422
Query: 1505 AKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIPVGIDNNTKLT 1684
+V EA+ +L + GR+P E+A TGLS+KR+ + AP+ RSLD +GI+ N K +
Sbjct: 423 YRVKEARKQLYSENGRQPDNIEVAEATGLSMKRLTAVLLAPKAPRSLDQKIGINQNLKPS 482
Query: 1685 DILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKSRTLQEIGDVM 1864
+++ DP+ ++ E+IL+KQ M +DLEKVL +L +E+ VIRWRFG+EDG+ +TLQEIG+ M
Sbjct: 483 EVIADPEADSAEDILLKQFMKKDLEKVLDSLSPRERQVIRWRFGMEDGRMKTLQEIGESM 542
Query: 1865 GVSRERVRQIELCAFRKLRNTDRTESLRQYL 1957
GVSRER+RQIELCAFRKL+N RT+ L+QYL
Sbjct: 543 GVSRERIRQIELCAFRKLKNKRRTKHLQQYL 573
>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
Length = 572
Score = 418 bits (1074), Expect = e-135
Identities = 263/630 (41%), Positives = 352/630 (55%), Gaps = 43/630 (6%)
Frame = +2
Query: 197 MSCLLPQFKCLPDSFSIQFKTTLH-----SNNIPKCREPTFFPTRCILSTTAPPVSSTET 361
M+CLLPQFKC PD+ SI FKT H +N+ K R+ F T+CILSTT +++T
Sbjct: 1 MACLLPQFKCSPDTLSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCILSTTTATMTTT-- 58
Query: 362 TILNXXXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXAGVLDIENFKLPSLESHTN 541
V+D E ++PSLE+H
Sbjct: 59 -------------------------------------------VVDDEKLRMPSLEAHLI 75
Query: 542 STSGNRPWAYSSGAVGQGT------SLPSEFVTT--EYXXXXXXXXXXXXXXXXXXXXXX 697
S +RP Y GA+ T +L +E + T E
Sbjct: 76 SVPADRPLTYI-GAIDPPTKAKFEATLATEPLITGDEALIAAAAVEAVALAKAAVEIAKD 134
Query: 698 XMMMNHQTPKPLITKSVPTVP-EFDNSINDLGSL---------------------PSDVD 811
+M P K P +P E D ++ L SD
Sbjct: 135 AALMVSTNPSSKSDKWPPDIPSELDTYWHETAQLNEIEQVDMVHHSLGAESRPKEDSDYL 194
Query: 812 EPTAXXXXXXXXXXSASIAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSAGRRVAASTVTV 991
+PT S SIAVRS RQ A +VAA+ V V
Sbjct: 195 DPTDEELKLLQMQLSKSIAVRSGRQTERRARRAR--------------AAEKVAANVVAV 240
Query: 992 KPGLSRRRGEK-------KDVLAFLGGMTN-AKLLTAAEEVELSKGIQDLLKLQEVHKEL 1147
K G S R+ D L +L G T+ ++LLTA EE+E S+GIQDLLKL+++++EL
Sbjct: 241 KSGSSSRKKRSALQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQDLLKLEKLYEEL 300
Query: 1148 TTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISVARGYYGTKVHL 1327
R+G +PTFA+WAAAA IDQ L +RL+YG C+DKMI+SNIRLVIS+A+ Y G ++L
Sbjct: 301 AERYGGQPTFAQWAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNL 360
Query: 1328 QDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQA 1507
QD+VQEG RGLV+ AEKFDASKGFKFSTYAHWWI+QAV++S ++QSR I +P++MVE
Sbjct: 361 QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY 420
Query: 1508 KVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIPVGIDNNTKLTD 1687
+V EA+ +L + GR P E+A TGLS+KR+ + P+ RSLD +GI+ N K ++
Sbjct: 421 RVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSE 480
Query: 1688 ILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKSRTLQEIGDVMG 1867
++ DPD ET EE+L+K+ M +DLEKVL +L +E+ VIRWRFGLEDG+ +TLQEIG++MG
Sbjct: 481 VIADPDAETTEELLMKKFMKQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMG 540
Query: 1868 VSRERVRQIELCAFRKLRNTDRTESLRQYL 1957
VSRER+RQIE CAFRKL+N RT++L+QYL
Sbjct: 541 VSRERIRQIESCAFRKLKNKKRTKNLQQYL 570
>ref|XP_018817643.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Juglans
regia]
Length = 585
Score = 411 bits (1057), Expect = e-132
Identities = 260/640 (40%), Positives = 352/640 (55%), Gaps = 53/640 (8%)
Frame = +2
Query: 197 MSCLLPQFKCLPDSFSIQFKTTLHSNNIP-------KCREPTFFPTRCILSTTAPPVSST 355
MSCLLPQFKC PD+FSIQF+T HS + K R+ +CILSTT+ S
Sbjct: 1 MSCLLPQFKCHPDTFSIQFRTHQHSVSTTHSHPQNEKSRDRIDIRAQCILSTTSFSTSIG 60
Query: 356 ETTILNXXXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXAGVLDIENFKLPSLESH 535
T +LN + +LPSLE+
Sbjct: 61 STAVLN------------------------------------------MGKLRLPSLETD 78
Query: 536 TNSTSGNRPWAYSSGAVGQGTSLPSE-------FVTTE--YXXXXXXXXXXXXXXXXXXX 688
++ + N+PW Y GAVG T E +T+E
Sbjct: 79 SDPFTTNKPWTYM-GAVGPPTEAKFEATLATETLITSEEAVIAAAAAEAVTLAKAAVKFA 137
Query: 689 XXXXMMMNHQTPKPLITKSV--------------------------PTVPE---FDNSIN 781
M++N+ + T+S P PE +N
Sbjct: 138 KDAAMLVNNNHSEKADTRSSVSFEADVLHFNWVQPVKTDRAAIVGDPRGPEAGLLENHSM 197
Query: 782 DLGSLPSDVDEPTAXXXXXXXXXXSASIAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSAG 961
+ SD EPT S S AVRS+RQ A
Sbjct: 198 QHATKESDDLEPTDKELDLVQEQLSKSPAVRSRRQTERKAKRA--------------KAA 243
Query: 962 RRVAASTVTVKPGLSRRRG-------EKKDVLAFLGGMTN-AKLLTAAEEVELSKGIQDL 1117
+ AA+ V+VKPG + R+ + D L +L T+ +KLLT+ EE+ELS+GIQDL
Sbjct: 244 EKAAANVVSVKPGSTSRKKRVSLQDIDYSDPLRYLRATTSTSKLLTSTEELELSEGIQDL 303
Query: 1118 LKLQEVHKELTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISVA 1297
LKL+++H+EL R G +P FA+WAAAA +DQ L +RL+YG C+DKMI+SNIRLVIS+A
Sbjct: 304 LKLEKLHEELAERCGSQPAFAQWAAAAGVDQKTLRKRLNYGTLCKDKMIKSNIRLVISIA 363
Query: 1298 RGYYGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRIIH 1477
+ Y G ++L+D+VQEG RGLV+ AEKFDASKGFKFSTYAHWWI+QAV++S ++QSR I
Sbjct: 364 KNYQGAGMNLEDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 423
Query: 1478 VPYYMVEVQAKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIPV 1657
+P++MVE +V EA+ +L + GR+P EIA TGLS+KR+ + P+ RSL+ +
Sbjct: 424 LPFHMVEATYRVKEARKQLYSENGRQPDDVEIAEATGLSMKRLTAVLLTPKAPRSLEQKI 483
Query: 1658 GIDNNTKLTDILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKSR 1837
GI+ N K ++++ DPD ET EE+L+KQ M +DLE VL +L +E+ VIRWRFG+EDG+ +
Sbjct: 484 GINQNLKPSEVIADPDAETAEELLMKQFMKQDLENVLDSLNPRERQVIRWRFGMEDGRMK 543
Query: 1838 TLQEIGDVMGVSRERVRQIELCAFRKLRNTDRTESLRQYL 1957
TLQEIG+ MGVSRER+RQIE CAFRKL+N RT+ L+QYL
Sbjct: 544 TLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL 583
>ref|XP_017623577.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1
[Gossypium arboreum]
Length = 574
Score = 410 bits (1054), Expect = e-132
Identities = 258/621 (41%), Positives = 339/621 (54%), Gaps = 34/621 (5%)
Frame = +2
Query: 197 MSCLLPQFKCLPDSFSIQFKTTLHSNNIPKCREPTFFPTRCILSTTAPPVSSTETTILNX 376
MSCLLPQFKC PD+FSI F+T H ++ + +E F C+LSTT+P S+ T+
Sbjct: 1 MSCLLPQFKCQPDTFSINFRT--HHSHHSRHKESICFRAHCVLSTTSPSASTRTTS---- 54
Query: 377 XXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXAGVLDIENFKLPSLESHTNSTSGN 556
VLD+E +LP E+ NS
Sbjct: 55 --------------------------------------VLDVEKLRLPFFEAQPNSIVAE 76
Query: 557 RPWAYSSGAVGQ-----GTSLPSEFVTTE----YXXXXXXXXXXXXXXXXXXXXXXXMMM 709
R Y G GT+L +E + T M
Sbjct: 77 RERTYIGGTGPPSEACFGTTLGTENLLTSDEAVIAAAAAEAVALARAAVKVSKDAVLMFK 136
Query: 710 NHQTPKP-----------------------LITKSVPTVPEFDNSINDLGSLP-SDVDEP 817
N+ + K ++ S+ EF+ ++ S SD EP
Sbjct: 137 NYSSAKTESKSATDTSTSNWVIFTEAERAGIVGDSLEDDCEFEEGDSEQNSTKESDEPEP 196
Query: 818 TAXXXXXXXXXXSASIAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSAGRRVAASTVTVKP 997
T S +IAVRSKRQ +VSVKS+ T K
Sbjct: 197 TNEELELLEEQLSGNIAVRSKRQPERKARRMRAAEKAATNVVSVKSSS--------TNKK 248
Query: 998 GLSRRRGEKKDVLAFLGGMTN-AKLLTAAEEVELSKGIQDLLKLQEVHKELTTRFGVEPT 1174
R D L FL G + ++LLTA EE+ELS+GIQDLLKL+ V +EL RFG PT
Sbjct: 249 RHGAVRDGNSDPLRFLRGTNDTSRLLTANEELELSEGIQDLLKLESVQEELAKRFGELPT 308
Query: 1175 FAEWAAAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISVARGYYGTKVHLQDIVQEGIR 1354
FA WAAAA +DQ L RRL YG C+DKMI+SNIRLVIS+A+ Y GT ++ QD+VQEG R
Sbjct: 309 FARWAAAAGVDQKTLRRRLDYGVLCKDKMIKSNIRLVISIAKNYLGTGMNFQDLVQEGCR 368
Query: 1355 GLVKSAEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQAKVNEAKYRL 1534
GL+K AEKFDASKGFKFSTYAHWWI+QAV++ +EQSR I +P YMVE +V EA+ +L
Sbjct: 369 GLIKGAEKFDASKGFKFSTYAHWWIKQAVRKFLSEQSRTIRLPLYMVEATYRVKEARKQL 428
Query: 1535 DKKLGRRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIPVGIDNNTKLTDILDDPDQET 1714
+ GR+P E+A TGLS+KR+ + P+ RSLD +GI N K ++++ DP+ +T
Sbjct: 429 YSENGRQPDNKEVAEATGLSMKRLTTVLLTPKAPRSLDQKIGIYQNLKPSEVIADPEADT 488
Query: 1715 PEEILIKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKSRTLQEIGDVMGVSRERVRQI 1894
E+IL KQ M EDLEKVL +L +E+ VIRWRFG+EDG+++TLQEIG+ +GVSRER+RQI
Sbjct: 489 SEDILTKQLMKEDLEKVLESLSPRERQVIRWRFGMEDGRTKTLQEIGESIGVSRERIRQI 548
Query: 1895 ELCAFRKLRNTDRTESLRQYL 1957
E+ AFRKL++ RT+ L+QYL
Sbjct: 549 EMSAFRKLKSKTRTKHLQQYL 569
>ref|XP_018817642.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Juglans
regia]
Length = 586
Score = 410 bits (1055), Expect = e-132
Identities = 259/641 (40%), Positives = 352/641 (54%), Gaps = 54/641 (8%)
Frame = +2
Query: 197 MSCLLPQFKCLPDSFSIQFKTTLHSNNIP-------KCREPTFFPTRCILSTTAPPVSST 355
MSCLLPQFKC PD+FSIQF+T HS + K R+ +CILSTT+ S
Sbjct: 1 MSCLLPQFKCHPDTFSIQFRTHQHSVSTTHSHPQNEKSRDRIDIRAQCILSTTSFSTSIG 60
Query: 356 ETTILNXXXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXAGVLDIENFKLPSLESH 535
T +LN + +LPSLE+
Sbjct: 61 STAVLN------------------------------------------MGKLRLPSLETD 78
Query: 536 TNSTSGNRPWAYSSGAVG--------QGTSLPSEFVTTE--YXXXXXXXXXXXXXXXXXX 685
++ + N+PW Y GAVG + T +T+E
Sbjct: 79 SDPFTTNKPWTYM-GAVGPPTEKAKFEATLATETLITSEEAVIAAAAAEAVTLAKAAVKF 137
Query: 686 XXXXXMMMNHQTPKPLITKSV--------------------------PTVPE---FDNSI 778
M++N+ + T+S P PE +N
Sbjct: 138 AKDAAMLVNNNHSEKADTRSSVSFEADVLHFNWVQPVKTDRAAIVGDPRGPEAGLLENHS 197
Query: 779 NDLGSLPSDVDEPTAXXXXXXXXXXSASIAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSA 958
+ SD EPT S S AVRS+RQ A
Sbjct: 198 MQHATKESDDLEPTDKELDLVQEQLSKSPAVRSRRQTERKAKRA--------------KA 243
Query: 959 GRRVAASTVTVKPGLSRRRG-------EKKDVLAFLGGMTN-AKLLTAAEEVELSKGIQD 1114
+ AA+ V+VKPG + R+ + D L +L T+ +KLLT+ EE+ELS+GIQD
Sbjct: 244 AEKAAANVVSVKPGSTSRKKRVSLQDIDYSDPLRYLRATTSTSKLLTSTEELELSEGIQD 303
Query: 1115 LLKLQEVHKELTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISV 1294
LLKL+++H+EL R G +P FA+WAAAA +DQ L +RL+YG C+DKMI+SNIRLVIS+
Sbjct: 304 LLKLEKLHEELAERCGSQPAFAQWAAAAGVDQKTLRKRLNYGTLCKDKMIKSNIRLVISI 363
Query: 1295 ARGYYGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRII 1474
A+ Y G ++L+D+VQEG RGLV+ AEKFDASKGFKFSTYAHWWI+QAV++S ++QSR I
Sbjct: 364 AKNYQGAGMNLEDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 423
Query: 1475 HVPYYMVEVQAKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIP 1654
+P++MVE +V EA+ +L + GR+P EIA TGLS+KR+ + P+ RSL+
Sbjct: 424 RLPFHMVEATYRVKEARKQLYSENGRQPDDVEIAEATGLSMKRLTAVLLTPKAPRSLEQK 483
Query: 1655 VGIDNNTKLTDILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKS 1834
+GI+ N K ++++ DPD ET EE+L+KQ M +DLE VL +L +E+ VIRWRFG+EDG+
Sbjct: 484 IGINQNLKPSEVIADPDAETAEELLMKQFMKQDLENVLDSLNPRERQVIRWRFGMEDGRM 543
Query: 1835 RTLQEIGDVMGVSRERVRQIELCAFRKLRNTDRTESLRQYL 1957
+TLQEIG+ MGVSRER+RQIE CAFRKL+N RT+ L+QYL
Sbjct: 544 KTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL 584
>ref|XP_017219646.1| PREDICTED: RNA polymerase sigma factor sigB-like [Daucus carota
subsp. sativus]
gb|KZM87901.1| hypothetical protein DCAR_025002 [Daucus carota subsp. sativus]
Length = 576
Score = 410 bits (1053), Expect = e-132
Identities = 258/615 (41%), Positives = 352/615 (57%), Gaps = 29/615 (4%)
Frame = +2
Query: 197 MSCLLPQFKCLPDSFSIQFKTTLHSNNIP--KCREPTFFPTRCILSTTAPPVSSTETTIL 370
MSCLLPQFKC SFSI + LH + K REP +F +C S+T TT+L
Sbjct: 1 MSCLLPQFKC---SFSIHLRPLLHQTSTQPLKDREPFYFRAQC---------SATVTTVL 48
Query: 371 NXXXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXAGVLDIENFKLPSLESHTNSTS 550
+ HSN AA+R W VLD+E L SL H++ +
Sbjct: 49 DIPSLE-----------AHSNPVAANRPWSPSTS----TAVLDLEKLHLASLGIHSDFAA 93
Query: 551 GNRPWAYSSGA-----VGQGTSLPSEFVTTE---YXXXXXXXXXXXXXXXXXXXXXXXMM 706
NRPW Y S G SLP++ T MM
Sbjct: 94 TNRPWTYVSDIDPALEASFGASLPTKTSLTSKEAVIAAAALEAVALAREAAKTAKDAVMM 153
Query: 707 MNH------------QTPKPLITKSVPTVPEFDNSINDLGSLPSDVDEPTAXXXXXXXXX 850
+NH + P+P + ++V T+ ++ + SDV EPTA
Sbjct: 154 VNHINSTTSYIKALAERPQPQLRQTVDTMVVGESEVAQ-SECVSDVVEPTAEEAELLQAE 212
Query: 851 XSASIAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSAGRRVAASTVTVKPGLS--RRRGEK 1024
SIAVRS+RQ A + +A+ V+VK G S +RRG +
Sbjct: 213 LVKSIAVRSRRQPQRKARRAR--------------AAKNTSATVVSVKSGSSSQKRRGSR 258
Query: 1025 K----DVLAFLGGM-TNAKLLTAAEEVELSKGIQDLLKLQEVHKELTTRFGVEPTFAEWA 1189
+ D L +L T++ LLTA EE ELSKGIQ LL+L++++KEL+ R+G EP+F +WA
Sbjct: 259 EIDHSDPLRYLRQTSTSSILLTATEERELSKGIQVLLRLEKIYKELSERYGGEPSFMQWA 318
Query: 1190 AAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISVARGYYGTKVHLQDIVQEGIRGLVKS 1369
AA +DQ L R+++YG C+DKMI SN+RLV+S+A+ Y GT ++ QD+VQEG RGLV+
Sbjct: 319 LAAGVDQTTLRRQINYGTFCKDKMIMSNVRLVVSIAKKYVGTGMNFQDLVQEGCRGLVRG 378
Query: 1370 AEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQAKVNEAKYRLDKKLG 1549
AEKFDASKGFKFSTYAHWWI+Q+V++ ++QSR I +P++MV+ KV EA+ L G
Sbjct: 379 AEKFDASKGFKFSTYAHWWIKQSVRKFLSDQSRTIRLPFHMVDATFKVKEARKNLYNANG 438
Query: 1550 RRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIPVGIDNNTKLTDILDDPDQETPEEIL 1729
R+ + EIA TGLS++R+ + P+ RSLD +G N K ++I DP+ ET EE+L
Sbjct: 439 RKASNEEIAEATGLSMRRLSAVLLVPKAPRSLDQNIGFSLNLKPSEITADPEAETSEELL 498
Query: 1730 IKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKSRTLQEIGDVMGVSRERVRQIELCAF 1909
IKQ+M +DLEKVL +L +E+ V+ RFGL+DG+ +TLQEIG++MGVSRER+RQIELCAF
Sbjct: 499 IKQSMRQDLEKVLNSLKPREKQVVICRFGLDDGRMKTLQEIGELMGVSRERIRQIELCAF 558
Query: 1910 RKLRNTDRTESLRQY 1954
RKL+N RT+ L QY
Sbjct: 559 RKLKNKRRTKRLHQY 573
>ref|XP_017245405.1| PREDICTED: RNA polymerase sigma factor sigB-like, partial [Daucus
carota subsp. sativus]
Length = 566
Score = 404 bits (1039), Expect = e-130
Identities = 248/596 (41%), Positives = 342/596 (57%), Gaps = 23/596 (3%)
Frame = +2
Query: 239 FSIQFKTTLHS--NNIPKCREPTFFPTRCILSTTAPPVSSTETTILNXXXXXXXXXXXXX 412
FSI FKT L S + K RE + +C S+T TT+L+
Sbjct: 1 FSIHFKTHLQSFPSQPLKYRETIYSRVQC---------SATVTTVLDTPSLE-------- 43
Query: 413 XXXVHSNSGAADRQWXXXXXXXXXAGVLDIENFKLPSLESHTNSTSGNRPWAYSSGAVGQ 592
HSNS AA+R W VLD+E L SLE H+NS + +RPW + S
Sbjct: 44 ---AHSNSVAANRSWSESTSN----AVLDLEKLHLASLEVHSNSVATDRPWTHISDMDPP 96
Query: 593 G-TSLPSEFVTTE---YXXXXXXXXXXXXXXXXXXXXXXXMMMNHQTPKPLITKSVPTVP 760
+LP E + T M+ +H+ + K
Sbjct: 97 SEATLPMENLLTSEEAVIAAAASEAVALARAAAKSAKDAAMINSHKNSTKIDVKPTALTY 156
Query: 761 EFDNSINDLGSLP----------------SDVDEPTAXXXXXXXXXXSASIAVRSKRQVX 892
E +S+++ L SDV+EPT SIAVRS RQ
Sbjct: 157 EAVDSLSERPELTQLGVAGVSQISQSEGRSDVEEPTVEELQILQEELGKSIAVRSSRQPE 216
Query: 893 XXXXXXXXXXXXXXGIVSVKSAGRRVAASTVTVKPGLSRRRGEKKDVLAFLGGMTNA-KL 1069
+VSVKS K + + + D L +L T++ KL
Sbjct: 217 RKARRARAAEKASATVVSVKSGSMS--------KKKRASQEIDHSDPLRYLRQTTSSSKL 268
Query: 1070 LTAAEEVELSKGIQDLLKLQEVHKELTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEEC 1249
LTA EE ELS+GIQ LL+L++++KEL+ R+G EP+F +WA+AA +DQI L R+++YG+ C
Sbjct: 269 LTATEEQELSEGIQALLRLEKIYKELSERYGGEPSFIQWASAAGVDQITLRRQINYGKFC 328
Query: 1250 RDKMIRSNIRLVISVARGYYGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWI 1429
+DKMI+SN+RLVIS+A+ Y + ++LQD+VQEG RGLV+ AEKFDASKGFKFSTYAHWWI
Sbjct: 329 KDKMIKSNVRLVISIAKNYLKSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWI 388
Query: 1430 RQAVQRSRAEQSRIIHVPYYMVEVQAKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQ 1609
+QAV++ ++QSR I +P YMVE +V EA+ L K GR+ + E+A TGL++ R+
Sbjct: 389 KQAVRKFLSDQSRTIRLPIYMVEAGYRVKEARQNLYNKNGRQASHEELAEATGLTMSRLS 448
Query: 1610 SAEDAPRPARSLDIPVGIDNNTKLTDILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKE 1789
+ AP+P RSLD +G D + K +D++ DP+ ET EE+LIK+ M +DL KVL TL +E
Sbjct: 449 NVLLAPKPPRSLDQKIGFDLDLKPSDVIADPEAETSEELLIKELMRQDLNKVLDTLKPRE 508
Query: 1790 QLVIRWRFGLEDGKSRTLQEIGDVMGVSRERVRQIELCAFRKLRNTDRTESLRQYL 1957
+ V+RWRFGL+DG+ +TLQEIG++MGVSRER+RQIELCAFRKL+N RT+SL+QY+
Sbjct: 509 KQVVRWRFGLDDGRMKTLQEIGEIMGVSRERIRQIELCAFRKLKNKRRTKSLQQYI 564
>gb|KZM96906.1| hypothetical protein DCAR_015732 [Daucus carota subsp. sativus]
Length = 574
Score = 398 bits (1022), Expect = e-127
Identities = 231/532 (43%), Positives = 319/532 (59%), Gaps = 21/532 (3%)
Frame = +2
Query: 425 HSNSGAADRQWXXXXXXXXXAGVLDIENFKLPSLESHTNSTSGNRPWAYSSGAVGQG-TS 601
HSNS AA+R W VLD+E L SLE H+NS + +RPW + S +
Sbjct: 53 HSNSVAANRSWSESTSN----AVLDLEKLHLASLEVHSNSVATDRPWTHISDMDPPSEAT 108
Query: 602 LPSEFVTTE---YXXXXXXXXXXXXXXXXXXXXXXXMMMNHQTPKPLITKSVPTVPEFDN 772
LP E + T M+ +H+ + K E +
Sbjct: 109 LPMENLLTSEEAVIAAAASEAVALARAAAKSAKDAAMINSHKNSTKIDVKPTALTYEAVD 168
Query: 773 SINDLGSLP----------------SDVDEPTAXXXXXXXXXXSASIAVRSKRQVXXXXX 904
S+++ L SDV+EPT SIAVRS RQ
Sbjct: 169 SLSERPELTQLGVAGVSQISQSEGRSDVEEPTVEELQILQEELGKSIAVRSSRQPERKAR 228
Query: 905 XXXXXXXXXXGIVSVKSAGRRVAASTVTVKPGLSRRRGEKKDVLAFLGGMTNA-KLLTAA 1081
+VSVKS K + + + D L +L T++ KLLTA
Sbjct: 229 RARAAEKASATVVSVKSGSMS--------KKKRASQEIDHSDPLRYLRQTTSSSKLLTAT 280
Query: 1082 EEVELSKGIQDLLKLQEVHKELTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDKM 1261
EE ELS+GIQ LL+L++++KEL+ R+G EP+F +WA+AA +DQI L R+++YG+ C+DKM
Sbjct: 281 EEQELSEGIQALLRLEKIYKELSERYGGEPSFIQWASAAGVDQITLRRQINYGKFCKDKM 340
Query: 1262 IRSNIRLVISVARGYYGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQAV 1441
I+SN+RLVIS+A+ Y + ++LQD+VQEG RGLV+ AEKFDASKGFKFSTYAHWWI+QAV
Sbjct: 341 IKSNVRLVISIAKNYLKSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 400
Query: 1442 QRSRAEQSRIIHVPYYMVEVQAKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAED 1621
++ ++QSR I +P YMVE +V EA+ L K GR+ + E+A TGL++ R+ +
Sbjct: 401 RKFLSDQSRTIRLPIYMVEAGYRVKEARQNLYNKNGRQASHEELAEATGLTMSRLSNVLL 460
Query: 1622 APRPARSLDIPVGIDNNTKLTDILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLVI 1801
AP+P RSLD +G D + K +D++ DP+ ET EE+LIK+ M +DL KVL TL +E+ V+
Sbjct: 461 APKPPRSLDQKIGFDLDLKPSDVIADPEAETSEELLIKELMRQDLNKVLDTLKPREKQVV 520
Query: 1802 RWRFGLEDGKSRTLQEIGDVMGVSRERVRQIELCAFRKLRNTDRTESLRQYL 1957
RWRFGL+DG+ +TLQEIG++MGVSRER+RQIELCAFRKL+N RT+SL+QY+
Sbjct: 521 RWRFGLDDGRMKTLQEIGEIMGVSRERIRQIELCAFRKLKNKRRTKSLQQYI 572
>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
emb|CBI40014.3| unnamed protein product, partial [Vitis vinifera]
Length = 575
Score = 392 bits (1008), Expect = e-125
Identities = 208/397 (52%), Positives = 280/397 (70%), Gaps = 1/397 (0%)
Frame = +2
Query: 770 NSINDLGSLPSDVDEPTAXXXXXXXXXXSASIAVRSKRQVXXXXXXXXXXXXXXXGIVSV 949
NS+ D+ D+ EPT S SI VRS RQV G+VSV
Sbjct: 185 NSLQDVTEDSDDL-EPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSV 243
Query: 950 KSAGRRVAASTVTVKPGLSRRRGEKKDVLAFLGGMTN-AKLLTAAEEVELSKGIQDLLKL 1126
+S + + + +S + + D L +L G T+ ++LLTA EE+ELS+GIQDLLKL
Sbjct: 244 RSG-------STSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKL 296
Query: 1127 QEVHKELTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISVARGY 1306
+++ ++L RFGV+PTFA+WAAAA +DQ L RR +YG C+DKMI+SNIRLVIS+A+ Y
Sbjct: 297 EKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNY 356
Query: 1307 YGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPY 1486
G +++QD+VQEG RGLV+ AEKFDASKGFKFSTYAHWWI+QAV++S ++QSR I +P+
Sbjct: 357 QGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 416
Query: 1487 YMVEVQAKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIPVGID 1666
+MVE +V EA+ +L + GR P E+A TGLS+KR+ + P+ RSLD +GI+
Sbjct: 417 HMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGIN 476
Query: 1667 NNTKLTDILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKSRTLQ 1846
N K ++++ DPD ET EE+LIKQ M EDLEKVL +L +E+ VIRWR+GLEDG+++TLQ
Sbjct: 477 QNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQ 536
Query: 1847 EIGDVMGVSRERVRQIELCAFRKLRNTDRTESLRQYL 1957
EIG++MGVSRER+RQIE CAFRKL+N RT+ L+QYL
Sbjct: 537 EIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYL 573
Score = 65.9 bits (159), Expect = 2e-07
Identities = 38/87 (43%), Positives = 48/87 (55%)
Frame = +2
Query: 197 MSCLLPQFKCLPDSFSIQFKTTLHSNNIPKCREPTFFPTRCILSTTAPPVSSTETTILNX 376
MSCLLPQFKC PD+FS K + S N RE +F +C LSTT+PP+S++ T +L+
Sbjct: 1 MSCLLPQFKCPPDTFSTHPKLHILSKN----REAIYFRVQCALSTTSPPLSTSTTAVLDI 56
Query: 377 XXXXXXXXXXXXXXXVHSNSGAADRQW 457
HSNS AA R W
Sbjct: 57 EKLRLPSLES------HSNSVAAHRPW 77
>ref|XP_023000238.1| RNA polymerase sigma factor sigB [Cucurbita maxima]
Length = 584
Score = 389 bits (1000), Expect = e-124
Identities = 250/627 (39%), Positives = 338/627 (53%), Gaps = 40/627 (6%)
Frame = +2
Query: 197 MSCLLPQFKCLPDSFSIQFKTTLHSNNIPKCREPTFFPTRCILSTTAPPVSSTETTILNX 376
MSCLLPQFKC P++FSIQFKT ++ T P SS T L
Sbjct: 1 MSCLLPQFKCHPETFSIQFKTPA-------------------ITITPTPTSSHHHTFLPT 41
Query: 377 XXXXXXXXXXXXXXXVHSNSGAADRQWXXXXXXXXXAGVLDIENFKLPSLESHTNSTSGN 556
AA A +++ KLP +++T+S S
Sbjct: 42 ANSTYFKVRDPHSLRTQCILSAATST--------GTATTFNVDRLKLPPFDTNTDSVSAE 93
Query: 557 RPWAYSSGAVGQG---TSLPSEFVTTEYXXXXXXXXXXXXXXXXXXXXXXXMMMNHQTPK 727
R +Y GAV T L SE T +++N+
Sbjct: 94 RLRSYL-GAVESSLASTLLTSEEATIA---AAAAEAVALAKAAVKAANDAALLVNNSNSA 149
Query: 728 PLITKSVPTVPE-----------------------------FDNSINDLGSLPSDVDEPT 820
+TKS + + + + SD EPT
Sbjct: 150 RSVTKSQSSSKSNALHFKWDQFMESERADIIGEPVGVNNRPVEGDALEPSTAESDDMEPT 209
Query: 821 AXXXXXXXXXXSASIAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSAGRRVAASTVTVKPG 1000
+ S SIAVRS RQ A + A S V++K G
Sbjct: 210 SEELELLQDEFSKSIAVRSNRQTERKARRTR--------------ASEKAATSVVSLKSG 255
Query: 1001 LSRRRGEKK-------DVLAFLGGMTNA-KLLTAAEEVELSKGIQDLLKLQEVHKELTTR 1156
S R+ D L +L T+A KLLTA++E+ELS+GIQDLLKL+ + +EL R
Sbjct: 256 SSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSEGIQDLLKLERLKEELAGR 315
Query: 1157 FGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISVARGYYGTKVHLQDI 1336
+G EPTFA+WAAAA ++Q L +RL+YG C+DKMI+SNIRLVIS+A+ Y G ++LQD+
Sbjct: 316 YGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGGGMNLQDL 375
Query: 1337 VQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEVQAKVN 1516
VQEG RGLV+ AEKFDASKGFKFSTYAHWWI+QAV++S ++QSR I +P++MVE KV
Sbjct: 376 VQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVK 435
Query: 1517 EAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIPVGIDNNTKLTDILD 1696
EA+ +L GR P EIAV GLS+KR+ + P+ RSL+ GI+ N K ++++
Sbjct: 436 EARKQLYTANGRLPADEEIAVAAGLSMKRLATVLMTPKAPRSLEQKFGINQNLKPSEVIS 495
Query: 1697 DPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKSRTLQEIGDVMGVSR 1876
DP+ T E++LIKQ M ++LEKVL +L +E+ +IRWR+G+EDG+ +TLQEIG++MGVSR
Sbjct: 496 DPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGMEDGRMKTLQEIGEMMGVSR 555
Query: 1877 ERVRQIELCAFRKLRNTDRTESLRQYL 1957
ER+RQIELCAFRKL+N RT+ L+QYL
Sbjct: 556 ERIRQIELCAFRKLKNKKRTKHLQQYL 582
>ref|XP_011623893.1| RNA polymerase sigma factor sigB [Amborella trichopoda]
Length = 563
Score = 386 bits (992), Expect = e-123
Identities = 197/339 (58%), Positives = 257/339 (75%), Gaps = 8/339 (2%)
Frame = +2
Query: 965 RVAASTVTVKPGLSRRRG-------EKKDVLAFLGGMTNA-KLLTAAEEVELSKGIQDLL 1120
+ AA+ +TVK G + RR + D L +L G TN+ KLLTA EE+ELS+GIQDLL
Sbjct: 222 KAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYLRGTTNSTKLLTATEELELSEGIQDLL 281
Query: 1121 KLQEVHKELTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISVAR 1300
KL+++HKELT RFG EPTF +WAAAA IDQ L RRL YG C+DKMI+SNIRLVIS+A+
Sbjct: 282 KLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRRRLSYGTHCKDKMIKSNIRLVISIAK 341
Query: 1301 GYYGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRIIHV 1480
Y G + +QD+VQEG RGLV+ AEKFDASKGFKFSTYAHWWI+QAV++S ++QSR I +
Sbjct: 342 NYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 401
Query: 1481 PYYMVEVQAKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIPVG 1660
P++MV+ +V EA +L + GR P E+A TGLS+KR+ + P+ RSLD +G
Sbjct: 402 PFHMVDATYRVREATKQLYSENGRHPNDEEVAEATGLSMKRLTTVLLTPKAPRSLDQKIG 461
Query: 1661 IDNNTKLTDILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKSRT 1840
I+ N K ++++ DP+ ET E++L+KQ M +DLEKVL TL +E+ V+RWRFGLEDG+ +T
Sbjct: 462 INQNLKPSEVISDPEAETAEDLLMKQFMKQDLEKVLNTLNPREKQVVRWRFGLEDGRMKT 521
Query: 1841 LQEIGDVMGVSRERVRQIELCAFRKLRNTDRTESLRQYL 1957
LQEIG++MGVSRER+RQIE AFRKL+N RT++LRQYL
Sbjct: 522 LQEIGELMGVSRERIRQIESSAFRKLKNKKRTKNLRQYL 560
>gb|ERM94758.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
Length = 570
Score = 386 bits (992), Expect = e-123
Identities = 197/339 (58%), Positives = 257/339 (75%), Gaps = 8/339 (2%)
Frame = +2
Query: 965 RVAASTVTVKPGLSRRRG-------EKKDVLAFLGGMTNA-KLLTAAEEVELSKGIQDLL 1120
+ AA+ +TVK G + RR + D L +L G TN+ KLLTA EE+ELS+GIQDLL
Sbjct: 229 KAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYLRGTTNSTKLLTATEELELSEGIQDLL 288
Query: 1121 KLQEVHKELTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISVAR 1300
KL+++HKELT RFG EPTF +WAAAA IDQ L RRL YG C+DKMI+SNIRLVIS+A+
Sbjct: 289 KLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRRRLSYGTHCKDKMIKSNIRLVISIAK 348
Query: 1301 GYYGTKVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRIIHV 1480
Y G + +QD+VQEG RGLV+ AEKFDASKGFKFSTYAHWWI+QAV++S ++QSR I +
Sbjct: 349 NYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 408
Query: 1481 PYYMVEVQAKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIPVG 1660
P++MV+ +V EA +L + GR P E+A TGLS+KR+ + P+ RSLD +G
Sbjct: 409 PFHMVDATYRVREATKQLYSENGRHPNDEEVAEATGLSMKRLTTVLLTPKAPRSLDQKIG 468
Query: 1661 IDNNTKLTDILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKSRT 1840
I+ N K ++++ DP+ ET E++L+KQ M +DLEKVL TL +E+ V+RWRFGLEDG+ +T
Sbjct: 469 INQNLKPSEVISDPEAETAEDLLMKQFMKQDLEKVLNTLNPREKQVVRWRFGLEDGRMKT 528
Query: 1841 LQEIGDVMGVSRERVRQIELCAFRKLRNTDRTESLRQYL 1957
LQEIG++MGVSRER+RQIE AFRKL+N RT++LRQYL
Sbjct: 529 LQEIGELMGVSRERIRQIESSAFRKLKNKKRTKNLRQYL 567
>gb|KJB46071.1| hypothetical protein B456_007G347300 [Gossypium raimondii]
Length = 446
Score = 381 bits (979), Expect = e-123
Identities = 206/392 (52%), Positives = 270/392 (68%), Gaps = 6/392 (1%)
Frame = +2
Query: 800 SDVDEPTAXXXXXXXXXXSASIAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSAGRRVAAS 979
SD EPT S SIAVRS RQ +VSVKS
Sbjct: 62 SDELEPTNEELKLLEEQLSRSIAVRSHRQTERKAKRTRAAEKAATNVVSVKSGSTN---- 117
Query: 980 TVTVKPGLSRRRGEKKDV-----LAFLGGMTN-AKLLTAAEEVELSKGIQDLLKLQEVHK 1141
+RRG +D+ L +L G TN +KLLTA EE+ELS+GIQDLLKL+ +H+
Sbjct: 118 --------RKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKLEGLHE 169
Query: 1142 ELTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISVARGYYGTKV 1321
EL R G PTFA+WAAAA +D+ L RL+YG C DKMI+SNIRLVIS+A+ Y G +
Sbjct: 170 ELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICMDKMIKSNIRLVISIAKNYQGAGM 229
Query: 1322 HLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMVEV 1501
+LQD+VQEG RGL++ AEKFDASKGFKFSTYAHWWI+QAV++S ++QSR I +P++MVE
Sbjct: 230 NLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEA 289
Query: 1502 QAKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIPVGIDNNTKL 1681
+V EA+ +L + GR+P E+A TGLS+KR+ + AP+ RSLD +GI+ N K
Sbjct: 290 TYRVKEARKQLFSENGRQPDNIEVAEATGLSMKRLTAVLLAPKAPRSLDQKIGINQNLKP 349
Query: 1682 TDILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKSRTLQEIGDV 1861
++++ DP+ ++ E+IL+KQ M +DLEKVL +L +E+ VIRWRFG+EDG+ +TLQEIG+
Sbjct: 350 SEVIADPEADSAEDILLKQFMKKDLEKVLDSLSPRERQVIRWRFGMEDGRVKTLQEIGES 409
Query: 1862 MGVSRERVRQIELCAFRKLRNTDRTESLRQYL 1957
MGVSRER+RQIELCAFRKL+N RT+ L+QYL
Sbjct: 410 MGVSRERIRQIELCAFRKLKNKRRTKHLQQYL 441
>ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Theobroma
cacao]
Length = 579
Score = 383 bits (984), Expect = e-121
Identities = 208/394 (52%), Positives = 276/394 (70%), Gaps = 8/394 (2%)
Frame = +2
Query: 800 SDVDEPTAXXXXXXXXXXSASIAVRSKRQVXXXXXXXXXXXXXXXGIVSVKSAGRRVAAS 979
SD EPT S SIAVRS+RQ A + AA+
Sbjct: 195 SDELEPTNEELERLEEQLSRSIAVRSRRQTERKAKRTR--------------AAEKAAAN 240
Query: 980 TVTVKPGLS--RRRGEKKDV-----LAFLGGMTN-AKLLTAAEEVELSKGIQDLLKLQEV 1135
V+VK G + +RRG +DV L +L G T+ ++LLTA EE+ELS+GIQDLLKL+ +
Sbjct: 241 VVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERL 300
Query: 1136 HKELTTRFGVEPTFAEWAAAAHIDQIQLGRRLHYGEECRDKMIRSNIRLVISVARGYYGT 1315
+EL R G +PTFA+WAAAA +DQ L RL+YG C+DKMI+SNIRLVIS+A+ Y G
Sbjct: 301 QEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGA 360
Query: 1316 KVHLQDIVQEGIRGLVKSAEKFDASKGFKFSTYAHWWIRQAVQRSRAEQSRIIHVPYYMV 1495
++LQD+VQEG RGLV+ AEKFDASKGFKFSTYAHWWI+QAV++S ++QSR I +P++MV
Sbjct: 361 GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV 420
Query: 1496 EVQAKVNEAKYRLDKKLGRRPTRAEIAVETGLSIKRIQSAEDAPRPARSLDIPVGIDNNT 1675
E +V EA+ +L + GR P E+A TGLS+KR+ + P+ RSLD +GI+ N
Sbjct: 421 EATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNL 480
Query: 1676 KLTDILDDPDQETPEEILIKQTMSEDLEKVLCTLGEKEQLVIRWRFGLEDGKSRTLQEIG 1855
K ++++ DP+ ET E++LIKQ M +DLEKVL +L ++E+ VIRWRFG+EDG+ +TLQEIG
Sbjct: 481 KPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIG 540
Query: 1856 DVMGVSRERVRQIELCAFRKLRNTDRTESLRQYL 1957
++MGVSRER+RQIE CAFRKL+N RT+ L+QYL
Sbjct: 541 ELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL 574
Score = 70.5 bits (171), Expect = 7e-09
Identities = 39/87 (44%), Positives = 50/87 (57%)
Frame = +2
Query: 197 MSCLLPQFKCLPDSFSIQFKTTLHSNNIPKCREPTFFPTRCILSTTAPPVSSTETTILNX 376
MSCLLPQFKC PD+FSIQF+T H ++ K +E F T+C+LSTT+ S+T T +L+
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRT--HHSHHSKHKEHICFRTQCVLSTTSSSTSTTATAVLD- 57
Query: 377 XXXXXXXXXXXXXXXVHSNSGAADRQW 457
H NS A DR W
Sbjct: 58 -----VEKLRLPSFEAHPNSVAVDRPW 79