BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00004180
         (2078 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI03048.1| Nucleotide-binding, alpha-beta plait [Cynara card...   439   e-143
ref|XP_021981790.1| regulator of nonsense transcripts UPF3-like ...   402   e-130
gb|KVI11060.1| Nucleotide-binding, alpha-beta plait, partial [Cy...   393   e-125
ref|XP_022027837.1| regulator of nonsense transcripts UPF3-like ...   387   e-125
ref|XP_022027836.1| regulator of nonsense transcripts UPF3-like ...   387   e-124
gb|OTG14412.1| putative regulator of nonsense-mediated decay, UP...   378   e-120
gb|OTG30754.1| putative regulator of nonsense-mediated decay, UP...   362   e-114
ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts...   345   e-107
ref|XP_023923242.1| regulator of nonsense transcripts UPF3-like ...   328   e-101
ref|XP_021663316.1| regulator of nonsense transcripts UPF3-like ...   326   e-100
ref|XP_019079126.1| PREDICTED: regulator of nonsense transcripts...   327   e-100
ref|XP_023731231.1| regulator of nonsense transcripts UPF3-like ...   324   e-100
ref|XP_021663318.1| regulator of nonsense transcripts UPF3-like ...   324   1e-99
ref|XP_021663319.1| regulator of nonsense transcripts UPF3-like ...   323   3e-99
ref|XP_019079129.1| PREDICTED: regulator of nonsense transcripts...   323   5e-99
ref|XP_020533244.1| regulator of nonsense transcripts UPF3 isofo...   323   7e-99
ref|XP_019079128.1| PREDICTED: regulator of nonsense transcripts...   323   1e-98
ref|XP_021663317.1| regulator of nonsense transcripts UPF3-like ...   320   5e-98
gb|PNT42665.1| hypothetical protein POPTR_004G225800v3 [Populus ...   319   1e-97
ref|XP_011028362.1| PREDICTED: regulator of nonsense transcripts...   320   1e-97

>gb|KVI03048.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
            scolymus]
          Length = 549

 Score =  439 bits (1128), Expect = e-143
 Identities = 254/423 (60%), Positives = 276/423 (65%), Gaps = 42/423 (9%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEYLEFLE VSKPVENLPSAEIQL              PIVTPLMDFIRQKRAAKGGPR
Sbjct: 136  DPEYLEFLEFVSKPVENLPSAEIQLERKEAERAGAAKEAPIVTPLMDFIRQKRAAKGGPR 195

Query: 487  ----------------------RPLPNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYV 600
                                  R LPNGKL+                   EKR  STMYV
Sbjct: 196  DNFLSSVIWYLCILTAFNNLLQRSLPNGKLMRRAGASSSSSSSSIVKRGSEKRMTSTMYV 255

Query: 601  QRDSGKGTNVKVKSSYVKRDG-QVSDKS-------GSVALEEERGAIGATDTGNXXXXXX 756
             RDSGK TNVK KS+YVKRD  QVS+KS       GSV  EEERGA GA+DTG       
Sbjct: 256  LRDSGKSTNVKDKSAYVKRDDRQVSEKSLSSSAASGSVLQEEERGAFGASDTGKKKILLL 315

Query: 757  XXXXXXXPHV---VTLQQNSSSVKSGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFS 927
                   PHV   +T QQNSSSVK  YGSGA RQNQR EASGRIIRSILLNKDTR++Q S
Sbjct: 316  KGKEKEIPHVTTGLTPQQNSSSVKLAYGSGAGRQNQRHEASGRIIRSILLNKDTRQSQAS 375

Query: 928  AVPSEQNQTLNQDKDXXXXXXLNVPPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRD 1107
            AV SEQNQTLNQDKD       N+P L KDSNG+P+DKVHGHD HGFY+EKQD+RSRNRD
Sbjct: 376  AVQSEQNQTLNQDKDRRPPRPQNMP-LLKDSNGLPDDKVHGHDLHGFYSEKQDKRSRNRD 434

Query: 1108 KPDRGVWTPLRRTEGTHASDEXXXXXXXXXXXVLPESAEG---------TRGEAKCDLSS 1260
            KPDRGVWTPLRR++G HASDE           VLP+SAEG         TRGEAK DLS+
Sbjct: 435  KPDRGVWTPLRRSDGPHASDESLSSSTSQSTQVLPDSAEGLYLSCGSPVTRGEAKYDLSN 494

Query: 1261 EHSLEYKPIGTGRGGHFSSDNGSHKHSGRRASTHNTKDADGSLNLNEGKPSKRGVSSGYV 1440
            E           RGGHFS+DNGSHKHSGRR S+HN KDADG  NL+EGKP K+GVS+GY 
Sbjct: 495  E-----------RGGHFSADNGSHKHSGRRISSHNAKDADGPSNLSEGKPPKKGVSAGYG 543

Query: 1441 SHE 1449
            SHE
Sbjct: 544  SHE 546


>ref|XP_021981790.1| regulator of nonsense transcripts UPF3-like [Helianthus annuus]
          Length = 487

 Score =  402 bits (1033), Expect = e-130
 Identities = 234/398 (58%), Positives = 263/398 (66%), Gaps = 5/398 (1%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEYLEFLE +SKPVENLPSAEIQL              PIVTPLMDF+RQKRAAKG  R
Sbjct: 115  DPEYLEFLEFISKPVENLPSAEIQLEKKEAERAGAAKEAPIVTPLMDFVRQKRAAKGVSR 174

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYVKRDG- 663
            R L NGKL+                   EKRT STMYV +DSGK  N K KS+YVK+D  
Sbjct: 175  RSLLNGKLMRRAGASSSNSSSVVVKHGSEKRTTSTMYVLKDSGKSRNSKEKSTYVKKDDR 234

Query: 664  QVSDKSGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVT---LQQNSSSVKSGYGS 834
            QVSDKSGSV LEEE+ A GA DTG                VVT    QQNS   K  Y S
Sbjct: 235  QVSDKSGSVVLEEEKSASGAPDTGKKKILLLKGKEKEILQVVTDLTPQQNSPPAKPAYAS 294

Query: 835  GAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQNQTLNQDKDXXXXXXLNVPPLSK 1014
            GAARQNQR EASGRIIRSIL+NKD R+NQ     SE NQ+LNQ+KD         PP + 
Sbjct: 295  GAARQNQRHEASGRIIRSILVNKDARQNQ-----SEPNQSLNQEKDRR-------PPRAP 342

Query: 1015 DSNGVPNDKVHGHDSHGFYNEKQDRRSRN-RDKPDRGVWTPLRRTEGTHASDEXXXXXXX 1191
                + +DKVHGHD H      +D+ SRN RDKPDRGVWTPLRR++G   SDE       
Sbjct: 343  ----LNDDKVHGHDLH------KDKLSRNNRDKPDRGVWTPLRRSDG---SDESLSSSAS 389

Query: 1192 XXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSGRRASTHNTK 1371
                V  +SAEGT GEAK D+S+E  +E KP+GTGRG HF SDNG+HKHSGRRAST+N K
Sbjct: 390  RSTQVGSDSAEGTCGEAKYDVSNERGVELKPVGTGRGAHFFSDNGTHKHSGRRASTNNAK 449

Query: 1372 DADGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSGS 1485
            DADGS N+N+GKPSKRGVS+GY SHEKRVWVQKPSSGS
Sbjct: 450  DADGSSNVNDGKPSKRGVSAGYGSHEKRVWVQKPSSGS 487


>gb|KVI11060.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
            var. scolymus]
          Length = 556

 Score =  393 bits (1009), Expect = e-125
 Identities = 218/404 (53%), Positives = 265/404 (65%), Gaps = 19/404 (4%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEYL+FLE ++KPVENLPSAEIQL              PIVTPLMDF+RQKRAAKGGPR
Sbjct: 115  DPEYLQFLELLAKPVENLPSAEIQLERKEAERAGTAKEAPIVTPLMDFVRQKRAAKGGPR 174

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXXE--KRTPSTMYVQRDSGKGTNVKVKSSYV--- 651
            R LPNGKL                       +RT +TMYV RD+GKG + K KS+Y+   
Sbjct: 175  RSLPNGKLTRRASGASSSSSSSTPLKRGSERRRTSTTMYVPRDTGKGRSGKEKSTYIQVQ 234

Query: 652  KRDGQ-VSDKS-------GSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVT---LQ 798
            KRD Q +S+KS       GSV LEE RG+ G  D G              PH+ T    Q
Sbjct: 235  KRDDQSLSEKSVGSYAASGSVVLEEGRGSSGTPDIGKKKILLLKGKEKEIPHMTTGLSPQ 294

Query: 799  QNSSSVKSGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQNQTLNQDKDXX 978
            Q+S SVK  +GSGA +QNQ++EASGRIIRSILLNKDT++NQ      +QNQT ++  D  
Sbjct: 295  QSSLSVKLSHGSGALKQNQQREASGRIIRSILLNKDTQQNQ----SEQQNQTSSRVMDRR 350

Query: 979  XXXXLNVPPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTH 1158
                 NVPP  KDSNG+P+D V GHD HGFY+EKQD+R+RNRD+PDRGVWTPLRR++G+H
Sbjct: 351  PPRPPNVPPPLKDSNGLPDDMVAGHDLHGFYSEKQDKRTRNRDRPDRGVWTPLRRSDGSH 410

Query: 1159 ASDEXXXXXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKH 1338
            ASDE           + P+SAEGT GE K DLS+    ++K IG+GRGGHFS DNGSHKH
Sbjct: 411  ASDESLSSSTSQSTQMQPDSAEGTHGEVKSDLSNARGGDFKTIGSGRGGHFSVDNGSHKH 470

Query: 1339 SGRRASTHNTKDADGSLNLNEGKPSKRGVSSGY---VSHEKRVW 1461
             GRR  +HN KDADGS +L+EGKP+KRGVS+GY   +  E + W
Sbjct: 471  GGRRGPSHNAKDADGSPSLSEGKPAKRGVSAGYETSLGSEVKFW 514


>ref|XP_022027837.1| regulator of nonsense transcripts UPF3-like isoform X2 [Helianthus
            annuus]
          Length = 437

 Score =  387 bits (994), Expect = e-125
 Identities = 229/396 (57%), Positives = 259/396 (65%), Gaps = 3/396 (0%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEYLEFLE VSKPVENLPSAEIQL              PIVTPLMDF+RQKRAAKGGPR
Sbjct: 83   DPEYLEFLEFVSKPVENLPSAEIQLERKEAERAGAAKEAPIVTPLMDFVRQKRAAKGGPR 142

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYVKRDG- 663
            R LPNGKL+                   EKRT STMYV R+SGK TN K KS+Y KRD  
Sbjct: 143  RSLPNGKLMRRAGASSSSSSTVAKRGS-EKRTSSTMYVLRNSGKSTNGKEKSTYAKRDDR 201

Query: 664  QVSDKSGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVTL--QQNSSSVKSGYGSG 837
            QVSDK GSV LEEERGA GA DTG                V +L  QQNSS++K      
Sbjct: 202  QVSDKPGSVILEEERGASGAPDTGKKKILLLKGKEKEIQVVTSLTPQQNSSTIKP----- 256

Query: 838  AARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQNQTLNQDKDXXXXXXLNVPPLSKD 1017
            AAR NQR EASGRIIRSIL+NKDTR+NQ     S+Q+Q + Q+KD          PL KD
Sbjct: 257  AARTNQRHEASGRIIRSILVNKDTRQNQ-----SDQSQNVYQEKDRKPPRG----PLLKD 307

Query: 1018 SNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHASDEXXXXXXXXX 1197
            S+G+P+DK      HG  N        N+DKPDRGVWTPLR ++G+ ++           
Sbjct: 308  SDGLPDDK------HGCMN--------NKDKPDRGVWTPLRCSDGSQSAK---------- 343

Query: 1198 XXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSGRRASTHNTKDA 1377
              VLP+SAEGTR EAK D+S+E  +E K  G GRGGHFSS+NG+HKHSGRRA THN KDA
Sbjct: 344  --VLPDSAEGTREEAKYDVSNERGVELKTTGAGRGGHFSSENGTHKHSGRRALTHNAKDA 401

Query: 1378 DGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSGS 1485
            DGS N NEGKP KRGVS+GY SHEKRVWVQKPSSGS
Sbjct: 402  DGSSNSNEGKPLKRGVSAGYGSHEKRVWVQKPSSGS 437


>ref|XP_022027836.1| regulator of nonsense transcripts UPF3-like isoform X1 [Helianthus
            annuus]
          Length = 469

 Score =  387 bits (994), Expect = e-124
 Identities = 229/396 (57%), Positives = 259/396 (65%), Gaps = 3/396 (0%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEYLEFLE VSKPVENLPSAEIQL              PIVTPLMDF+RQKRAAKGGPR
Sbjct: 115  DPEYLEFLEFVSKPVENLPSAEIQLERKEAERAGAAKEAPIVTPLMDFVRQKRAAKGGPR 174

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYVKRDG- 663
            R LPNGKL+                   EKRT STMYV R+SGK TN K KS+Y KRD  
Sbjct: 175  RSLPNGKLMRRAGASSSSSSTVAKRGS-EKRTSSTMYVLRNSGKSTNGKEKSTYAKRDDR 233

Query: 664  QVSDKSGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVTL--QQNSSSVKSGYGSG 837
            QVSDK GSV LEEERGA GA DTG                V +L  QQNSS++K      
Sbjct: 234  QVSDKPGSVILEEERGASGAPDTGKKKILLLKGKEKEIQVVTSLTPQQNSSTIKP----- 288

Query: 838  AARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQNQTLNQDKDXXXXXXLNVPPLSKD 1017
            AAR NQR EASGRIIRSIL+NKDTR+NQ     S+Q+Q + Q+KD          PL KD
Sbjct: 289  AARTNQRHEASGRIIRSILVNKDTRQNQ-----SDQSQNVYQEKDRKPPRG----PLLKD 339

Query: 1018 SNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHASDEXXXXXXXXX 1197
            S+G+P+DK      HG  N        N+DKPDRGVWTPLR ++G+ ++           
Sbjct: 340  SDGLPDDK------HGCMN--------NKDKPDRGVWTPLRCSDGSQSAK---------- 375

Query: 1198 XXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSGRRASTHNTKDA 1377
              VLP+SAEGTR EAK D+S+E  +E K  G GRGGHFSS+NG+HKHSGRRA THN KDA
Sbjct: 376  --VLPDSAEGTREEAKYDVSNERGVELKTTGAGRGGHFSSENGTHKHSGRRALTHNAKDA 433

Query: 1378 DGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSGS 1485
            DGS N NEGKP KRGVS+GY SHEKRVWVQKPSSGS
Sbjct: 434  DGSSNSNEGKPLKRGVSAGYGSHEKRVWVQKPSSGS 469


>gb|OTG14412.1| putative regulator of nonsense-mediated decay, UPF3 [Helianthus
            annuus]
          Length = 495

 Score =  378 bits (970), Expect = e-120
 Identities = 223/393 (56%), Positives = 253/393 (64%), Gaps = 5/393 (1%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEYLEFLE +SKPVENLPSAEIQL              PIVTPLMDF+RQKRAAKG  R
Sbjct: 115  DPEYLEFLEFISKPVENLPSAEIQLEKKEAERAGAAKEAPIVTPLMDFVRQKRAAKGVSR 174

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYVKRDG- 663
            R L NGKL+                   EKRT STMYV +DSGK  N K KS+YVK+D  
Sbjct: 175  RSLLNGKLMRRAGASSSNSSSVVVKHGSEKRTTSTMYVLKDSGKSRNSKEKSTYVKKDDR 234

Query: 664  QVSDKSGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVT---LQQNSSSVKSGYGS 834
            QVSDKSGSV LEEE+ A GA DTG                VVT    QQNS   K  Y S
Sbjct: 235  QVSDKSGSVVLEEEKSASGAPDTGKKKILLLKGKEKEILQVVTDLTPQQNSPPAKPAYAS 294

Query: 835  GAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQNQTLNQDKDXXXXXXLNVPPLSK 1014
            GAARQNQR EASGRIIRSIL+NKD R+NQ     SE NQ+LNQ+KD         PP + 
Sbjct: 295  GAARQNQRHEASGRIIRSILVNKDARQNQ-----SEPNQSLNQEKDRR-------PPRAP 342

Query: 1015 DSNGVPNDKVHGHDSHGFYNEKQDRRSRN-RDKPDRGVWTPLRRTEGTHASDEXXXXXXX 1191
                + +DKVHGHD H      +D+ SRN RDKPDRGVWTPLRR++G   SDE       
Sbjct: 343  ----LNDDKVHGHDLH------KDKLSRNNRDKPDRGVWTPLRRSDG---SDESLSSSAS 389

Query: 1192 XXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSGRRASTHNTK 1371
                V  +SAEGT GEAK D+S+E  +E KP+GTGRG HF SDNG+HKHSGRRAST+N K
Sbjct: 390  RSTQVGSDSAEGTCGEAKYDVSNERGVELKPVGTGRGAHFFSDNGTHKHSGRRASTNNAK 449

Query: 1372 DADGSLNLNEGKPSKRGVSSGYVSHEKRVWVQK 1470
            DADGS N+N+GKPSKRGVS+GY SHE   +  K
Sbjct: 450  DADGSSNVNDGKPSKRGVSAGYGSHEVSAYGSK 482


>gb|OTG30754.1| putative regulator of nonsense-mediated decay, UPF3 [Helianthus
            annuus]
          Length = 478

 Score =  362 bits (930), Expect = e-114
 Identities = 217/384 (56%), Positives = 247/384 (64%), Gaps = 3/384 (0%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEYLEFLE VSKPVENLPSAEIQL              PIVTPLMDF+RQKRAAKGGPR
Sbjct: 115  DPEYLEFLEFVSKPVENLPSAEIQLERKEAERAGAAKEAPIVTPLMDFVRQKRAAKGGPR 174

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYVKRDG- 663
            R LPNGKL+                   EKRT STMYV R+SGK TN K KS+Y KRD  
Sbjct: 175  RSLPNGKLMRRAGASSSSSSTVAKRGS-EKRTSSTMYVLRNSGKSTNGKEKSTYAKRDDR 233

Query: 664  QVSDKSGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVTL--QQNSSSVKSGYGSG 837
            QVSDK GSV LEEERGA GA DTG                V +L  QQNSS++K      
Sbjct: 234  QVSDKPGSVILEEERGASGAPDTGKKKILLLKGKEKEIQVVTSLTPQQNSSTIKP----- 288

Query: 838  AARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQNQTLNQDKDXXXXXXLNVPPLSKD 1017
            AAR NQR EASGRIIRSIL+NKDTR+NQ     S+Q+Q + Q+KD          PL KD
Sbjct: 289  AARTNQRHEASGRIIRSILVNKDTRQNQ-----SDQSQNVYQEKDRKPPRG----PLLKD 339

Query: 1018 SNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHASDEXXXXXXXXX 1197
            S+G+P+DK      HG  N        N+DKPDRGVWTPLR ++G+ ++           
Sbjct: 340  SDGLPDDK------HGCMN--------NKDKPDRGVWTPLRCSDGSQSAK---------- 375

Query: 1198 XXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSGRRASTHNTKDA 1377
              VLP+SAEGTR EAK D+S+E  +E K  G GRGGHFSS+NG+HKHSGRRA THN KDA
Sbjct: 376  --VLPDSAEGTREEAKYDVSNERGVELKTTGAGRGGHFSSENGTHKHSGRRALTHNAKDA 433

Query: 1378 DGSLNLNEGKPSKRGVSSGYVSHE 1449
            DGS N NEGKP KRGVS+GY SHE
Sbjct: 434  DGSSNSNEGKPLKRGVSAGYGSHE 457


>ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X4 [Vitis
            vinifera]
 emb|CBI29694.3| unnamed protein product, partial [Vitis vinifera]
          Length = 519

 Score =  345 bits (885), Expect = e-107
 Identities = 198/406 (48%), Positives = 253/406 (62%), Gaps = 14/406 (3%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEY+EF+E ++KPVENLPSAEIQL              PIVTPLMDF+RQKRAAKG  R
Sbjct: 115  DPEYMEFVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSR 174

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXX--EKRTPSTMYVQRDSGKGTNVKVKSSYV--- 651
            R L NGKL                      ++R  +TMYV RD+ K T+ K KS+++   
Sbjct: 175  RSLSNGKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVP 234

Query: 652  KRDGQV-SDKS-------GSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVTLQQNS 807
            KRD Q+ SDKS       G+ ALEEE G  GA D G               H +  Q  +
Sbjct: 235  KRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREISHHLLQQNVT 294

Query: 808  SSVKSGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQ-NQTLNQDKDXXXX 984
            S VK+  G+ A +QNQR+E SGRIIRSILLNKD R++Q S   +EQ +Q  N +K+    
Sbjct: 295  SPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPP 354

Query: 985  XXLNVPPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHAS 1164
               ++   SK++NG  +DKV G+D H F +EKQD+R+RN+D+PDRGVWTPLRR++G+HAS
Sbjct: 355  RPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHAS 414

Query: 1165 DEXXXXXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSG 1344
            DE              +  EG+ GE + D+S+  S E K +G+GRGGH + DNGSHKHSG
Sbjct: 415  DESLSSSASQPTS--SDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSG 472

Query: 1345 RRASTHNTKDADGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSG 1482
            RR  TH+ KDADGS  ++EGK SKRG + GY SHEK+VWVQK SSG
Sbjct: 473  RRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHEKQVWVQKSSSG 518


>ref|XP_023923242.1| regulator of nonsense transcripts UPF3-like [Quercus suber]
 ref|XP_023923243.1| regulator of nonsense transcripts UPF3-like [Quercus suber]
          Length = 520

 Score =  328 bits (841), Expect = e-101
 Identities = 199/411 (48%), Positives = 249/411 (60%), Gaps = 18/411 (4%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEYLEFLE ++KPVENLPSAEIQL              PIVTPLMDFIRQKRAAKGG R
Sbjct: 115  DPEYLEFLEFLAKPVENLPSAEIQLERRDAERAGSAKDAPIVTPLMDFIRQKRAAKGGSR 174

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXX-EKRTPST-MYVQRDSGKGTNVKVKSSYV--- 651
            R L NGKL                     E+R  ST MYV RD+ K T+VK KS+Y+   
Sbjct: 175  RSLSNGKLSRRASGSSSGSPSSASSKRGSERRRISTRMYVLRDAAKNTSVKDKSTYILVP 234

Query: 652  -KRDGQVSDKS-------GSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVV--TLQQ 801
             + D Q+SDKS       G+  LEEE G  G  ++G                V    LQQ
Sbjct: 235  KRDDQQLSDKSVTLVPAAGNELLEEENGVSGTNESGKKKVLLLKGKEREISSVSGSILQQ 294

Query: 802  N--SSSVKSGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQN-QTLNQDKD 972
               SS V++  GSG  + NQ++E SGRIIRSIL+NKD+R++Q     SEQ  QT N +KD
Sbjct: 295  QGVSSPVRNIIGSGPLKHNQQREGSGRIIRSILINKDSRQSQSFVGQSEQQIQTSNSEKD 354

Query: 973  XXXXXXLNVPPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEG 1152
                   +    SKD+N  P +KV  +D  GFY+EKQ++RSRN+DKPDRGVW PLRR++G
Sbjct: 355  KRPPRIPHAQLASKDTNSTPENKVVANDFPGFYSEKQEKRSRNKDKPDRGVWAPLRRSDG 414

Query: 1153 THASDEXXXXXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSH 1332
            THAS+E           +L +S+EG+ G+ K ++ +    E K +G+GR  H S DNGSH
Sbjct: 415  THASEE---SLSSGTSQLLLDSSEGSHGDMKFEMENARIGEVKNLGSGRSSHSSLDNGSH 471

Query: 1333 KHSGRRASTHNTKDADGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSGS 1485
            KH GRR  TH  KD DGS N++EGK  +RG  +G+ SHEK+VWVQKPSSGS
Sbjct: 472  KHFGRRGPTHGVKDVDGSSNVSEGKHLRRG--TGFNSHEKQVWVQKPSSGS 520


>ref|XP_021663316.1| regulator of nonsense transcripts UPF3-like isoform X1 [Hevea
            brasiliensis]
          Length = 518

 Score =  326 bits (836), Expect = e-100
 Identities = 197/407 (48%), Positives = 245/407 (60%), Gaps = 17/407 (4%)
 Frame = +1

Query: 316  YLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPRRPL 495
            YLEFLES+SKP ENLPSAEIQL              PI+TPLMDF+RQKRAAK G RR L
Sbjct: 118  YLEFLESISKPAENLPSAEIQLERREAERAGAAKDAPIITPLMDFVRQKRAAKSGSRRIL 177

Query: 496  PNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYV---KRDGQ 666
             NGKL                    +KR  +TMYV RDS K T+ K KS+Y+   KRD Q
Sbjct: 178  ANGKLSRRAGASGSPSSSSSKRSSDKKRLSTTMYVLRDSAKSTSGKEKSTYILVPKRDDQ 237

Query: 667  -VSDK-------SGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVTL-----QQNS 807
             +SDK       SG+  LE+E G  G  D                  + TL     QQN+
Sbjct: 238  HLSDKAVTLASASGTEVLEDESGISGIADARKKKILLLKGKEK---EISTLSGGMSQQNA 294

Query: 808  SSVKSGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQ-NQTLNQDKDXXXX 984
            +S      S A +Q+QR+EASGRIIRSILLNKD+R+NQ S V SEQ NQT N +KD    
Sbjct: 295  ASFDKNQTSPALKQSQRREASGRIIRSILLNKDSRQNQSSGVQSEQQNQTSNFEKDKRPP 354

Query: 985  XXLNVPPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHAS 1164
               +V  + KD+NG  +DKV G+D H F  EKQ++R+R++D+PDRG+W PLRR++ ++AS
Sbjct: 355  RPQHVQLILKDANGDSDDKVVGNDLHSFSGEKQEKRTRSKDRPDRGIWAPLRRSDESYAS 414

Query: 1165 DEXXXXXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSG 1344
            DE              +S++G  G+ K D  +  S E K +G+GRGGH S DNGSHKH G
Sbjct: 415  DESILSSASQSAQSGVDSSQGNLGDTKVDPLNSRSGEVKTLGSGRGGHSSLDNGSHKHFG 474

Query: 1345 RRASTHNTKDADGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSGS 1485
            RR   H  +D DGS    EGK SKRGV+SGY SHEK++WVQKP+SGS
Sbjct: 475  RR-GPHTGRDVDGS--SGEGKLSKRGVASGYGSHEKQIWVQKPNSGS 518


>ref|XP_019079126.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
            vinifera]
 ref|XP_019079127.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
            vinifera]
          Length = 533

 Score =  327 bits (837), Expect = e-100
 Identities = 189/395 (47%), Positives = 243/395 (61%), Gaps = 14/395 (3%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEY+EF+E ++KPVENLPSAEIQL              PIVTPLMDF+RQKRAAKG  R
Sbjct: 115  DPEYMEFVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSR 174

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXX--EKRTPSTMYVQRDSGKGTNVKVKSSYV--- 651
            R L NGKL                      ++R  +TMYV RD+ K T+ K KS+++   
Sbjct: 175  RSLSNGKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVP 234

Query: 652  KRDGQV-SDKS-------GSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVTLQQNS 807
            KRD Q+ SDKS       G+ ALEEE G  GA D G               H +  Q  +
Sbjct: 235  KRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREISHHLLQQNVT 294

Query: 808  SSVKSGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQ-NQTLNQDKDXXXX 984
            S VK+  G+ A +QNQR+E SGRIIRSILLNKD R++Q S   +EQ +Q  N +K+    
Sbjct: 295  SPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPP 354

Query: 985  XXLNVPPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHAS 1164
               ++   SK++NG  +DKV G+D H F +EKQD+R+RN+D+PDRGVWTPLRR++G+HAS
Sbjct: 355  RPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHAS 414

Query: 1165 DEXXXXXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSG 1344
            DE              +  EG+ GE + D+S+  S E K +G+GRGGH + DNGSHKHSG
Sbjct: 415  DESLSSSASQPTS--SDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSG 472

Query: 1345 RRASTHNTKDADGSLNLNEGKPSKRGVSSGYVSHE 1449
            RR  TH+ KDADGS  ++EGK SKRG + GY SHE
Sbjct: 473  RRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHE 507


>ref|XP_023731231.1| regulator of nonsense transcripts UPF3-like [Lactuca sativa]
          Length = 467

 Score =  324 bits (830), Expect = e-100
 Identities = 210/404 (51%), Positives = 241/404 (59%), Gaps = 11/404 (2%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEYLEFLESVSKPVENLPSAEIQL              PIVTPLMDF+RQKRAAKGGPR
Sbjct: 115  DPEYLEFLESVSKPVENLPSAEIQLERKEAERAGAAKEAPIVTPLMDFVRQKRAAKGGPR 174

Query: 487  -RPLPNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYVKR-D 660
             R LPNGKL+                   EKR+ STMYV R+ GK TN K KS+YVKR +
Sbjct: 175  QRSLPNGKLMRRNGASSSSSNSTVVKRGSEKRS-STMYVLREGGKSTNGKEKSTYVKRAE 233

Query: 661  GQVSDK-------SGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVTLQQNSSSVK 819
             Q S+K       SGSV L+EE+G+ GA+DTG              P+V T       + 
Sbjct: 234  RQASEKSPSSSTQSGSVVLDEEKGSFGASDTGKKKILLLKGKEKEIPNVTTGVTPQQKLL 293

Query: 820  SGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQNQTLNQDKDXXXXXXLNV 999
             G G G +RQNQRQEASGRIIRSILL KD+R++Q     SEQNQ+LNQDKD       NV
Sbjct: 294  YGSG-GGSRQNQRQEASGRIIRSILL-KDSRQHQ-----SEQNQSLNQDKDRRPPRPQNV 346

Query: 1000 PPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHASDEXXX 1179
             PLSKDSNG+ +DK+      GFY EK D+RSRN++KPDRGVWTPLR    +HASDE   
Sbjct: 347  GPLSKDSNGLQDDKL----QDGFYGEKMDKRSRNKEKPDRGVWTPLR----SHASDESLS 398

Query: 1180 XXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSG-RRAS 1356
                    +LP+SAEG+                                S+KH G RR S
Sbjct: 399  SSTSQSTQLLPDSAEGS--------------------------------SYKHGGNRRTS 426

Query: 1357 THN-TKDADGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSGS 1485
            +HN  KDAD   N NEGKP KRGVSSGY   EKRVWVQKPSSGS
Sbjct: 427  SHNANKDADVFSNSNEGKPPKRGVSSGY---EKRVWVQKPSSGS 467


>ref|XP_021663318.1| regulator of nonsense transcripts UPF3-like isoform X3 [Hevea
            brasiliensis]
          Length = 511

 Score =  324 bits (831), Expect = 1e-99
 Identities = 194/402 (48%), Positives = 241/402 (59%), Gaps = 12/402 (2%)
 Frame = +1

Query: 316  YLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPRRPL 495
            YLEFLES+SKP ENLPSAEIQL              PI+TPLMDF+RQKRAAK G RR L
Sbjct: 118  YLEFLESISKPAENLPSAEIQLERREAERAGAAKDAPIITPLMDFVRQKRAAKSGSRRIL 177

Query: 496  PNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYV---KRDGQ 666
             NGKL                    +KR  +TMYV RDS K T+ K KS+Y+   KRD Q
Sbjct: 178  ANGKLSRRAGASGSPSSSSSKRSSDKKRLSTTMYVLRDSAKSTSGKEKSTYILVPKRDDQ 237

Query: 667  -VSDK-------SGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVTLQQNSSSVKS 822
             +SDK       SG+  LE+E G  G  D                       QN++S   
Sbjct: 238  HLSDKAVTLASASGTEVLEDESGISGIADARKKKILLLKGKEKEIS-----TQNAASFDK 292

Query: 823  GYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQ-NQTLNQDKDXXXXXXLNV 999
               S A +Q+QR+EASGRIIRSILLNKD+R+NQ S V SEQ NQT N +KD       +V
Sbjct: 293  NQTSPALKQSQRREASGRIIRSILLNKDSRQNQSSGVQSEQQNQTSNFEKDKRPPRPQHV 352

Query: 1000 PPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHASDEXXX 1179
              + KD+NG  +DKV G+D H F  EKQ++R+R++D+PDRG+W PLRR++ ++ASDE   
Sbjct: 353  QLILKDANGDSDDKVVGNDLHSFSGEKQEKRTRSKDRPDRGIWAPLRRSDESYASDESIL 412

Query: 1180 XXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSGRRAST 1359
                       +S++G  G+ K D  +  S E K +G+GRGGH S DNGSHKH GRR   
Sbjct: 413  SSASQSAQSGVDSSQGNLGDTKVDPLNSRSGEVKTLGSGRGGHSSLDNGSHKHFGRR-GP 471

Query: 1360 HNTKDADGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSGS 1485
            H  +D DGS    EGK SKRGV+SGY SHEK++WVQKP+SGS
Sbjct: 472  HTGRDVDGS--SGEGKLSKRGVASGYGSHEKQIWVQKPNSGS 511


>ref|XP_021663319.1| regulator of nonsense transcripts UPF3-like isoform X4 [Hevea
            brasiliensis]
          Length = 510

 Score =  323 bits (829), Expect = 3e-99
 Identities = 193/402 (48%), Positives = 241/402 (59%), Gaps = 12/402 (2%)
 Frame = +1

Query: 316  YLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPRRPL 495
            YLEFLES+SKP ENLPSAEIQL              PI+TPLMDF+RQKRAAK G RR L
Sbjct: 118  YLEFLESISKPAENLPSAEIQLERREAERAGAAKDAPIITPLMDFVRQKRAAKSGSRRIL 177

Query: 496  PNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYV---KRDGQ 666
             NGKL                    +KR  +TMYV RDS K T+ K KS+Y+   KRD Q
Sbjct: 178  ANGKLSRRAGASGSPSSSSSKRSSDKKRLSTTMYVLRDSAKSTSGKEKSTYILVPKRDDQ 237

Query: 667  -VSDK-------SGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVTLQQNSSSVKS 822
             +SDK       SG+  LE+E G  G  D                     +  N++S   
Sbjct: 238  HLSDKAVTLASASGTEVLEDESGISGIADARKKKILLLKGKEKE------ISTNAASFDK 291

Query: 823  GYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQ-NQTLNQDKDXXXXXXLNV 999
               S A +Q+QR+EASGRIIRSILLNKD+R+NQ S V SEQ NQT N +KD       +V
Sbjct: 292  NQTSPALKQSQRREASGRIIRSILLNKDSRQNQSSGVQSEQQNQTSNFEKDKRPPRPQHV 351

Query: 1000 PPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHASDEXXX 1179
              + KD+NG  +DKV G+D H F  EKQ++R+R++D+PDRG+W PLRR++ ++ASDE   
Sbjct: 352  QLILKDANGDSDDKVVGNDLHSFSGEKQEKRTRSKDRPDRGIWAPLRRSDESYASDESIL 411

Query: 1180 XXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSGRRAST 1359
                       +S++G  G+ K D  +  S E K +G+GRGGH S DNGSHKH GRR   
Sbjct: 412  SSASQSAQSGVDSSQGNLGDTKVDPLNSRSGEVKTLGSGRGGHSSLDNGSHKHFGRR-GP 470

Query: 1360 HNTKDADGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSGS 1485
            H  +D DGS    EGK SKRGV+SGY SHEK++WVQKP+SGS
Sbjct: 471  HTGRDVDGS--SGEGKLSKRGVASGYGSHEKQIWVQKPNSGS 510


>ref|XP_019079129.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Vitis
            vinifera]
          Length = 528

 Score =  323 bits (829), Expect = 5e-99
 Identities = 190/395 (48%), Positives = 242/395 (61%), Gaps = 14/395 (3%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEY+EF+E ++KPVENLPSAEIQL              PIVTPLMDF+RQKRAAKG  R
Sbjct: 115  DPEYMEFVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSR 174

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXX--EKRTPSTMYVQRDSGKGTNVKVKSSYV--- 651
            R L NGKL                      ++R  +TMYV RD+ K T+ K KS+++   
Sbjct: 175  RSLSNGKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVP 234

Query: 652  KRDGQV-SDKS-------GSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVTLQQNS 807
            KRD Q+ SDKS       G+ ALEEE G  GA D G               H VT     
Sbjct: 235  KRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREISHNVT----- 289

Query: 808  SSVKSGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQ-NQTLNQDKDXXXX 984
            S VK+  G+ A +QNQR+E SGRIIRSILLNKD R++Q S   +EQ +Q  N +K+    
Sbjct: 290  SPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPP 349

Query: 985  XXLNVPPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHAS 1164
               ++   SK++NG  +DKV G+D H F +EKQD+R+RN+D+PDRGVWTPLRR++G+HAS
Sbjct: 350  RPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHAS 409

Query: 1165 DEXXXXXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSG 1344
            DE              +  EG+ GE + D+S+  S E K +G+GRGGH + DNGSHKHSG
Sbjct: 410  DESLSSSASQPTS--SDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSG 467

Query: 1345 RRASTHNTKDADGSLNLNEGKPSKRGVSSGYVSHE 1449
            RR  TH+ KDADGS  ++EGK SKRG + GY SHE
Sbjct: 468  RRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHE 502


>ref|XP_020533244.1| regulator of nonsense transcripts UPF3 isoform X1 [Jatropha curcas]
 ref|XP_020533245.1| regulator of nonsense transcripts UPF3 isoform X1 [Jatropha curcas]
          Length = 517

 Score =  323 bits (827), Expect = 7e-99
 Identities = 196/407 (48%), Positives = 245/407 (60%), Gaps = 14/407 (3%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +P YLEFLE +SKP ENLPSAEIQL              PI+TPLMDF+RQKRAAK G R
Sbjct: 115  DPAYLEFLELISKPAENLPSAEIQLERREAERAGIIKDAPIITPLMDFVRQKRAAKTGSR 174

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYV----K 654
            R L NGKL                    +KR  +TMYV RD+ K T+ K KS+Y+    +
Sbjct: 175  RILGNGKLSRRAGTSGSPGSSSSKRSSEKKRVSTTMYVLRDTAKSTSGKDKSTYILVPKR 234

Query: 655  RDGQVSDK-------SGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHV--VTLQQNS 807
             D Q+SDK       SG+  LE+E GA G TD G                +    LQQN+
Sbjct: 235  DDQQLSDKAVTLGTASGAEVLEDESGASGITDAGKKKILLLKGKEKEISDLSGFMLQQNA 294

Query: 808  SSVKSGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSE-QNQTLNQDKDXXXX 984
            +S      S A +QNQR+EASGRIIRSILLNK++R+NQ S + SE Q QT N +K+    
Sbjct: 295  ASFDKNVISSAVKQNQRREASGRIIRSILLNKESRQNQSSGIQSEHQMQTSNSEKEKRPP 354

Query: 985  XXLNVPPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHAS 1164
               +V  L  ++NG  +DKV  +D HGF  EKQ++R+RN+D+PDR VWTPLRR++G++AS
Sbjct: 355  RPPHV-QLVLNTNGALDDKVVINDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYAS 413

Query: 1165 DEXXXXXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSG 1344
            DE              +S++G  G+ K D S+  S E K + TGRG H S DNGSHKH G
Sbjct: 414  DESLSLSASQSTQSGVDSSQGNLGDLKVDPSNSRSGEVKTL-TGRGSHSSLDNGSHKHFG 472

Query: 1345 RRASTHNTKDADGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSGS 1485
            RR  +H  +DADGS    EGK SKRG +SGY SHEK+VWVQK SSGS
Sbjct: 473  RRGPSHPVRDADGS--SGEGKASKRGGASGYGSHEKQVWVQKSSSGS 517


>ref|XP_019079128.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Vitis
            vinifera]
          Length = 529

 Score =  323 bits (827), Expect = 1e-98
 Identities = 189/395 (47%), Positives = 242/395 (61%), Gaps = 14/395 (3%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEY+EF+E ++KPVENLPSAEIQL              PIVTPLMDF+RQKRAAKG  R
Sbjct: 115  DPEYMEFVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSR 174

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXX--EKRTPSTMYVQRDSGKGTNVKVKSSYV--- 651
            R L NGKL                      ++R  +TMYV RD+ K T+ K KS+++   
Sbjct: 175  RSLSNGKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVP 234

Query: 652  KRDGQV-SDKS-------GSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVTLQQNS 807
            KRD Q+ SDKS       G+ ALEEE G  GA D G               H    Q  +
Sbjct: 235  KRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREISH----QNVT 290

Query: 808  SSVKSGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQ-NQTLNQDKDXXXX 984
            S VK+  G+ A +QNQR+E SGRIIRSILLNKD R++Q S   +EQ +Q  N +K+    
Sbjct: 291  SPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPP 350

Query: 985  XXLNVPPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHAS 1164
               ++   SK++NG  +DKV G+D H F +EKQD+R+RN+D+PDRGVWTPLRR++G+HAS
Sbjct: 351  RPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHAS 410

Query: 1165 DEXXXXXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSG 1344
            DE              +  EG+ GE + D+S+  S E K +G+GRGGH + DNGSHKHSG
Sbjct: 411  DESLSSSASQPTS--SDFPEGSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSG 468

Query: 1345 RRASTHNTKDADGSLNLNEGKPSKRGVSSGYVSHE 1449
            RR  TH+ KDADGS  ++EGK SKRG + GY SHE
Sbjct: 469  RRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHE 503


>ref|XP_021663317.1| regulator of nonsense transcripts UPF3-like isoform X2 [Hevea
            brasiliensis]
          Length = 512

 Score =  320 bits (821), Expect = 5e-98
 Identities = 196/407 (48%), Positives = 242/407 (59%), Gaps = 17/407 (4%)
 Frame = +1

Query: 316  YLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPRRPL 495
            YLEFLES+SKP ENLPSAEIQL              PI+TPLMDF+RQKRAAK G RR L
Sbjct: 118  YLEFLESISKPAENLPSAEIQLERREAERAGAAKDAPIITPLMDFVRQKRAAKSGSRRIL 177

Query: 496  PNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYV---KRDGQ 666
             NGKL                    +KR  +TMYV RDS K T+ K KS+Y+   KRD Q
Sbjct: 178  ANGKLSRRAGASGSPSSSSSKRSSDKKRLSTTMYVLRDSAKSTSGKEKSTYILVPKRDDQ 237

Query: 667  -VSDK-------SGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHVVTL-----QQNS 807
             +SDK       SG+  LE+E G  G  D                  + TL     QQN+
Sbjct: 238  HLSDKAVTLASASGTEVLEDESGISGIADARKKKILLLKGKEK---EISTLSGGMSQQNA 294

Query: 808  SSVKSGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSEQ-NQTLNQDKDXXXX 984
            +S      S A +Q+QR+EASGRIIRSILLNKD+R+NQ S V SEQ NQT N +KD    
Sbjct: 295  ASFDKNQTSPALKQSQRREASGRIIRSILLNKDSRQNQSSGVQSEQQNQTSNFEKDKRPP 354

Query: 985  XXLNVPPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHAS 1164
               +V  + KD+NG  +DKV G+D H F  EKQ++R+R++D+PDRG+W PLRR++ ++AS
Sbjct: 355  RPQHVQLILKDANGDSDDKVVGNDLHSFSGEKQEKRTRSKDRPDRGIWAPLRRSDESYAS 414

Query: 1165 DEXXXXXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSG 1344
            DE               +  G  G+ K D  +  S E K +G+GRGGH S DNGSHKH G
Sbjct: 415  DE------SILSSASQSAQSGNLGDTKVDPLNSRSGEVKTLGSGRGGHSSLDNGSHKHFG 468

Query: 1345 RRASTHNTKDADGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSGS 1485
            RR   H  +D DGS    EGK SKRGV+SGY SHEK++WVQKP+SGS
Sbjct: 469  RR-GPHTGRDVDGS--SGEGKLSKRGVASGYGSHEKQIWVQKPNSGS 512


>gb|PNT42665.1| hypothetical protein POPTR_004G225800v3 [Populus trichocarpa]
          Length = 505

 Score =  319 bits (818), Expect = 1e-97
 Identities = 194/409 (47%), Positives = 243/409 (59%), Gaps = 14/409 (3%)
 Frame = +1

Query: 301  SPNPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGG 480
            S +PEYLEFLE ++KPVENLPSAEIQL              PIVTPLMDF+RQKR AK G
Sbjct: 100  SKDPEYLEFLELIAKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNG 159

Query: 481  PRRPLPNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYV--- 651
            PRR L NGKL                    +KR  +TMYV RD+ K T+ K KS+YV   
Sbjct: 160  PRRILSNGKLSRRAGGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVP 219

Query: 652  KRDGQ-------VSDKSGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHV---VTLQQ 801
            KRD Q       +   SG+  LE+E    G TD+G                V   ++ QQ
Sbjct: 220  KRDDQQLSNAVTLGSGSGTAVLEDESVVSGITDSGKKKILLLKGKEKEISLVTGTMSQQQ 279

Query: 802  NSSSVKSGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSE-QNQTLNQDKDXX 978
            + SS      S  A ++QR+E SGR+IRSILLNKD+R  + S V SE Q QT N +K+  
Sbjct: 280  SISSSDRNIISSTALKSQRRETSGRMIRSILLNKDSRHIRSSGVHSEPQMQTSNLEKEKR 339

Query: 979  XXXXLNVPPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTH 1158
                 +     KD+NG P+DKV G+D HGF NEKQ++R+RN+D+PDRGVWTPLRR++G++
Sbjct: 340  PPRPPHAQLGLKDANGTPDDKVVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSY 399

Query: 1159 ASDEXXXXXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKH 1338
            ASDE            + +S++G  G+ K D  +  S E K +G+GRG H S DNGSHKH
Sbjct: 400  ASDESLLSSASQSTQSVFDSSQGNHGDVKVDSLNLRSGEVKVLGSGRGNHSSLDNGSHKH 459

Query: 1339 SGRRASTHNTKDADGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSGS 1485
             GRR  +H  +DADGS    E K  KRG SSGY SHEK+VWVQK S+GS
Sbjct: 460  FGRRGPSHIVRDADGS--TVEAKTPKRGGSSGYGSHEKQVWVQK-STGS 505


>ref|XP_011028362.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Populus euphratica]
          Length = 521

 Score =  320 bits (819), Expect = 1e-97
 Identities = 191/407 (46%), Positives = 239/407 (58%), Gaps = 14/407 (3%)
 Frame = +1

Query: 307  NPEYLEFLESVSKPVENLPSAEIQLXXXXXXXXXXXXXXPIVTPLMDFIRQKRAAKGGPR 486
            +PEYLEF E + KPVENLPSAEIQL              PIVTPLMDF+RQKR AK GPR
Sbjct: 117  DPEYLEFHELIEKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPR 176

Query: 487  RPLPNGKLLXXXXXXXXXXXXXXXXXXXEKRTPSTMYVQRDSGKGTNVKVKSSYV---KR 657
            R L NGKL                    +KR  +TMYV RD+ K T+ K KS+YV   KR
Sbjct: 177  RILSNGKLSRRAGGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVQVPKR 236

Query: 658  DGQ-------VSDKSGSVALEEERGAIGATDTGNXXXXXXXXXXXXXPHV---VTLQQNS 807
            DGQ       +   SG+  LE+E G  G TD+G                V   +  QQ+ 
Sbjct: 237  DGQQLSNAVTLGSGSGTAVLEDESGVSGITDSGKKKILLLKGKEKEISLVTGTMAQQQSI 296

Query: 808  SSVKSGYGSGAARQNQRQEASGRIIRSILLNKDTRRNQFSAVPSE-QNQTLNQDKDXXXX 984
            SS      S    ++QR+E SGR+IRSILLNKD+R  + S V SE Q QT N +KD    
Sbjct: 297  SSSDRNIISSTVLKSQRRETSGRMIRSILLNKDSRHIRSSGVHSEPQMQTSNLEKDKRPP 356

Query: 985  XXLNVPPLSKDSNGVPNDKVHGHDSHGFYNEKQDRRSRNRDKPDRGVWTPLRRTEGTHAS 1164
               +     KD+NG P+DKV G+D HGF NEKQ++R+RN+D+PDRGVWTPLRR++G++AS
Sbjct: 357  RPPHAQLGLKDANGTPDDKVVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYAS 416

Query: 1165 DEXXXXXXXXXXXVLPESAEGTRGEAKCDLSSEHSLEYKPIGTGRGGHFSSDNGSHKHSG 1344
            DE            + +S++G  G+ K D  +  S E K +G+GR  H S DNGSHKH G
Sbjct: 417  DESLSSSASQSTQSVFDSSQGNHGDVKVDNLNLRSGEVKVLGSGRSNHSSLDNGSHKHFG 476

Query: 1345 RRASTHNTKDADGSLNLNEGKPSKRGVSSGYVSHEKRVWVQKPSSGS 1485
            RR  +H  +DA+GS    E K  KRG +SGY SHEK+VWVQK +SGS
Sbjct: 477  RRGPSHIVRDAEGS--AVEAKTPKRGGASGYGSHEKQVWVQKSTSGS 521