BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00002712
         (1615 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023763293.1| DEAD-box ATP-dependent RNA helicase 3, chlor...   553   0.0  
ref|XP_021970851.1| DEAD-box ATP-dependent RNA helicase 3, chlor...   577   0.0  
gb|PIA40742.1| hypothetical protein AQUCO_02400068v1 [Aquilegia ...   483   e-180
gb|PIA40740.1| hypothetical protein AQUCO_02400068v1 [Aquilegia ...   483   e-180
ref|XP_010932029.2| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   482   e-180
ref|XP_002512602.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   483   e-179
ref|XP_020672191.1| DEAD-box ATP-dependent RNA helicase 3, chlor...   473   e-178
gb|KHG19221.1| DEAD-box ATP-dependent RNA helicase 3, chloroplas...   473   e-178
ref|XP_020099826.1| DEAD-box ATP-dependent RNA helicase 3, chlor...   481   e-178
ref|XP_020099828.1| DEAD-box ATP-dependent RNA helicase 3, chlor...   481   e-178
ref|XP_015630408.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   482   e-177
ref|XP_015630409.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   482   e-177
dbj|BAF13687.1| Os03g0827700, partial [Oryza sativa Japonica Gro...   482   e-177
gb|PPR96922.1| hypothetical protein GOBAR_AA23738 [Gossypium bar...   471   e-177
ref|XP_020099827.1| DEAD-box ATP-dependent RNA helicase 3, chlor...   481   e-177
ref|XP_017637445.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   470   e-177
gb|EEC76452.1| hypothetical protein OsI_14162 [Oryza sativa Indi...   482   e-177
gb|PKA48882.1| DEAD-box ATP-dependent RNA helicase 3, chloroplas...   471   e-176
gb|OAY71442.1| DEAD-box ATP-dependent RNA helicase 3, chloroplas...   476   e-175
gb|ACG27839.1| nucleolar RNA helicase 2 [Zea mays]                    478   e-175

>ref|XP_023763293.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Lactuca
            sativa]
          Length = 790

 Score =  553 bits (1424), Expect(2) = 0.0
 Identities = 293/381 (76%), Positives = 308/381 (80%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVE ILQKLP QRQSMLFSATMPGWVQKLSRKYL   LTIDLVGDQDEKL
Sbjct: 283  DQMLAVGFEEDVEVILQKLPSQRQSMLFSATMPGWVQKLSRKYLKSPLTIDLVGDQDEKL 342

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAI +TST+KRSMLGDLVTVYAKGGKTIIFTQTKRDADEVS+ LTSSI SEALH
Sbjct: 343  AEGIKLYAIQSTSTSKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSLGLTSSIVSEALH 402

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT
Sbjct: 403  GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 462

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGKEGKAILMYTNNQRRTV+SLE+DVGC FE+ISPP VED+L S              
Sbjct: 463  GRAGKEGKAILMYTNNQRRTVRSLEQDVGCKFEYISPPAVEDLLDSSVKQVIATLSCVHN 522

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                              TR      AHMSGFSQPPSSRSLITHE+GW TLQMTR+S+SS
Sbjct: 523  DSIEFFTPTAQKLIDEKGTRALAAALAHMSGFSQPPSSRSLITHEKGWMTLQMTRDSESS 582

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
            + GYMSARTVTGFLSSVYATAAG LGKIHVIADKK+QGAVFDLPE+IAKNLLTKEMPPGT
Sbjct: 583  LQGYMSARTVTGFLSSVYATAAGALGKIHVIADKKVQGAVFDLPEEIAKNLLTKEMPPGT 642

Query: 296  TITKISKLPVLEDDGPASDFY 234
            TITKI+KLP LED+GPASDFY
Sbjct: 643  TITKINKLPALEDNGPASDFY 663



 Score =  213 bits (543), Expect(2) = 0.0
 Identities = 107/113 (94%), Positives = 112/113 (99%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDE+NRNR+ GR+PRVLVLAPT
Sbjct: 151  QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEQNRNRIVGRMPRVLVLAPT 210

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVENEIKESAPYL+TVCVYGGVSYTLQKNQL+RGVDIVVGTPGRLIDL
Sbjct: 211  RELAKQVENEIKESAPYLQTVCVYGGVSYTLQKNQLSRGVDIVVGTPGRLIDL 263


>ref|XP_021970851.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Helianthus
            annuus]
 gb|OTG23488.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 759

 Score =  577 bits (1487), Expect = 0.0
 Identities = 307/381 (80%), Positives = 317/381 (83%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVETIL+KLPPQRQSMLFSATMP WVQKLSRKYL   LTIDLVGDQDEKL
Sbjct: 270  DQMLAVGFEEDVETILEKLPPQRQSMLFSATMPRWVQKLSRKYLKTPLTIDLVGDQDEKL 329

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH
Sbjct: 330  AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 389

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT
Sbjct: 390  GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 449

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGK+GKAILMYTN+QRRTVK+LE+DVGC FEFISPPGV+DVLGS              
Sbjct: 450  GRAGKKGKAILMYTNSQRRTVKTLEQDVGCKFEFISPPGVDDVLGSSAEQVIATLSGVHD 509

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                              TR      AHMSGFSQPPSSRSLITHEQGWTTLQMTR+SDSS
Sbjct: 510  ESIDFFTPTAQKLYDQQGTRALAAALAHMSGFSQPPSSRSLITHEQGWTTLQMTRDSDSS 569

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
            I GYMSARTVTGFLSSVYATAAGVLGKIHVIADKK+QGAVFDLPEDIAKNLL+KE+PPGT
Sbjct: 570  IKGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKVQGAVFDLPEDIAKNLLSKEIPPGT 629

Query: 296  TITKISKLPVLEDDGPASDFY 234
            TITKISKLPVLEDDGPASDFY
Sbjct: 630  TITKISKLPVLEDDGPASDFY 650



 Score =  213 bits (543), Expect = 4e-57
 Identities = 127/209 (60%), Positives = 141/209 (67%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIK+LTEEDE+NRN LAGRLPRVLVLAPT
Sbjct: 138  QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKRLTEEDEDNRNSLAGRLPRVLVLAPT 197

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDLXXXXIKC 1256
            RELAKQVE EIKESAPYLRTVCVYGGVSYTLQKNQL+RGVDIVVGTPGRLID        
Sbjct: 198  RELAKQVETEIKESAPYLRTVCVYGGVSYTLQKNQLSRGVDIVVGTPGRLID-------- 249

Query: 1255 LLLVLRKMWKLSYKNFHHKGKACFSQQLCQAGFKNSPGSILTRP*LLIWLVTRMKS*LKV 1076
              LV   + KL    F    +A    Q+   GF+    +IL +                 
Sbjct: 250  --LVNSNVLKLGEVQFLVLDEA---DQMLAVGFEEDVETILEK----------------- 287

Query: 1075 *SSMLYQPPQLQSGRCSVILSRYMQRVGR 989
                   PPQ QS   S  + R++Q++ R
Sbjct: 288  ------LPPQRQSMLFSATMPRWVQKLSR 310


>gb|PIA40742.1| hypothetical protein AQUCO_02400068v1 [Aquilegia coerulea]
          Length = 775

 Score =  483 bits (1243), Expect(2) = e-180
 Identities = 253/381 (66%), Positives = 293/381 (76%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVE IL+KLP +RQSMLFSATMP WV+KL+RKYL+  LTIDLVGDQDEKL
Sbjct: 262  DQMLAVGFEEDVELILEKLPTKRQSMLFSATMPVWVKKLARKYLDNPLTIDLVGDQDEKL 321

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIPTTST+KR++L DL+TVYAKGGKTI+FTQTKRDADEVSMALTSSIASEALH
Sbjct: 322  AEGIKLYAIPTTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTSSIASEALH 381

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 382  GDISQHQRERTLNGFRMGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 441

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGK G AILM+T NQRRTV+SLE+DVGC+FEFISPP +EDVL +              
Sbjct: 442  GRAGKVGNAILMFTTNQRRTVRSLERDVGCHFEFISPPAIEDVLEASAEQVVATLNGVHP 501

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                                      AH+SGFSQPPSSRSLI+HEQGW T+Q+TR+ D S
Sbjct: 502  ESINFFVPTAEKMIEEKGVASLAAALAHLSGFSQPPSSRSLISHEQGWVTVQLTRDPDHS 561

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
              G++S R+VTGFLS VY  AA  +GKI++IAD+++QGAVFDLPE+IAK LLTK+ PPG 
Sbjct: 562  -RGFLSPRSVTGFLSDVYPAAADEVGKIYLIADERVQGAVFDLPEEIAKELLTKQTPPGN 620

Query: 296  TITKISKLPVLEDDGPASDFY 234
            +++KI+KLP L+DDGP+ D Y
Sbjct: 621  SLSKITKLPTLQDDGPSYDNY 641



 Score =  181 bits (459), Expect(2) = e-180
 Identities = 92/114 (80%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENR-NRLAGRLPRVLVLAP 1439
            QRAVLVPAL+GRDII RAKTGTGKTLAF IPIIK+LTEEDEE   +R  G LPRVLVLAP
Sbjct: 129  QRAVLVPALDGRDIIARAKTGTGKTLAFGIPIIKRLTEEDEERAMSRRTGYLPRVLVLAP 188

Query: 1438 TRELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            TRELAKQVE EI+ESAPYL++VCVYGGVSY +Q+N L+RGVD+VVGTPGR+IDL
Sbjct: 189  TRELAKQVEKEIQESAPYLKSVCVYGGVSYNIQQNALSRGVDVVVGTPGRIIDL 242


>gb|PIA40740.1| hypothetical protein AQUCO_02400068v1 [Aquilegia coerulea]
          Length = 755

 Score =  483 bits (1243), Expect(2) = e-180
 Identities = 253/381 (66%), Positives = 293/381 (76%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVE IL+KLP +RQSMLFSATMP WV+KL+RKYL+  LTIDLVGDQDEKL
Sbjct: 262  DQMLAVGFEEDVELILEKLPTKRQSMLFSATMPVWVKKLARKYLDNPLTIDLVGDQDEKL 321

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIPTTST+KR++L DL+TVYAKGGKTI+FTQTKRDADEVSMALTSSIASEALH
Sbjct: 322  AEGIKLYAIPTTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTSSIASEALH 381

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 382  GDISQHQRERTLNGFRMGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 441

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGK G AILM+T NQRRTV+SLE+DVGC+FEFISPP +EDVL +              
Sbjct: 442  GRAGKVGNAILMFTTNQRRTVRSLERDVGCHFEFISPPAIEDVLEASAEQVVATLNGVHP 501

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                                      AH+SGFSQPPSSRSLI+HEQGW T+Q+TR+ D S
Sbjct: 502  ESINFFVPTAEKMIEEKGVASLAAALAHLSGFSQPPSSRSLISHEQGWVTVQLTRDPDHS 561

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
              G++S R+VTGFLS VY  AA  +GKI++IAD+++QGAVFDLPE+IAK LLTK+ PPG 
Sbjct: 562  -RGFLSPRSVTGFLSDVYPAAADEVGKIYLIADERVQGAVFDLPEEIAKELLTKQTPPGN 620

Query: 296  TITKISKLPVLEDDGPASDFY 234
            +++KI+KLP L+DDGP+ D Y
Sbjct: 621  SLSKITKLPTLQDDGPSYDNY 641



 Score =  181 bits (459), Expect(2) = e-180
 Identities = 92/114 (80%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENR-NRLAGRLPRVLVLAP 1439
            QRAVLVPAL+GRDII RAKTGTGKTLAF IPIIK+LTEEDEE   +R  G LPRVLVLAP
Sbjct: 129  QRAVLVPALDGRDIIARAKTGTGKTLAFGIPIIKRLTEEDEERAMSRRTGYLPRVLVLAP 188

Query: 1438 TRELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            TRELAKQVE EI+ESAPYL++VCVYGGVSY +Q+N L+RGVD+VVGTPGR+IDL
Sbjct: 189  TRELAKQVEKEIQESAPYLKSVCVYGGVSYNIQQNALSRGVDVVVGTPGRIIDL 242


>ref|XP_010932029.2| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            3, chloroplastic [Elaeis guineensis]
          Length = 762

 Score =  482 bits (1241), Expect(2) = e-180
 Identities = 254/381 (66%), Positives = 291/381 (76%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVE IL+KLP  RQSMLFSATMPGWV+KL+R+YLN  LTIDLVGDQDEKL
Sbjct: 283  DQMLAVGFEEDVEVILEKLPSDRQSMLFSATMPGWVKKLARRYLNDPLTIDLVGDQDEKL 342

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIPTT+T+KR++L DLVTVYAKGGKTI+FTQTKRDADEVSMALT+SIASEALH
Sbjct: 343  AEGIKLYAIPTTATSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALH 402

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 403  GDISQHQRERTLSGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 462

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGKEG  ILM+T++QRRTV+SLE+DVGC FEFISPP +++VL S              
Sbjct: 463  GRAGKEGTTILMFTSSQRRTVRSLERDVGCKFEFISPPLMQEVLESSAEQVVATLQGVHP 522

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                              T       AH+SGFSQPPSSRSLI+HEQGW TLQ+TRE   S
Sbjct: 523  ESIQHFLPTAQRLTQELGTNALAAALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGYS 582

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
              G+ S R+VTGFLS VY  AA  +GKI++IAD+++QGAVFDLPE+IAK LL K++PPG 
Sbjct: 583  -RGFFSPRSVTGFLSDVYPAAADEVGKIYLIADERVQGAVFDLPEEIAKELLNKQLPPGN 641

Query: 296  TITKISKLPVLEDDGPASDFY 234
            TI+KI KLP L+DDGP +D Y
Sbjct: 642  TISKIMKLPALQDDGPPTDNY 662



 Score =  179 bits (454), Expect(2) = e-180
 Identities = 89/113 (78%), Positives = 100/113 (88%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVL+PALE RD+I RAKTGTGKTLAF IPIIK+LTE++++ R    GRLPRVLVLAPT
Sbjct: 151  QRAVLLPALESRDLIARAKTGTGKTLAFGIPIIKRLTEDNDDRRISRRGRLPRVLVLAPT 210

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESAPYL TVCVYGGVSY +Q+N L RGVD+VVGTPGR+IDL
Sbjct: 211  RELAKQVEKEIKESAPYLGTVCVYGGVSYNIQQNALARGVDVVVGTPGRIIDL 263


>ref|XP_002512602.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Ricinus communis]
 gb|EEF50054.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
          Length = 772

 Score =  483 bits (1244), Expect(2) = e-179
 Identities = 255/381 (66%), Positives = 290/381 (76%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQML+ GFEEDVE IL+ LP +RQSMLFSATMP WV+KL+RKYL+  L IDLVGDQ+EKL
Sbjct: 278  DQMLSFGFEEDVEVILENLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKL 337

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAI T +T+KRS+L DLVTVYAKGGKTIIFTQTKRDADEVSM LT+SIASEALH
Sbjct: 338  AEGIKLYAISTNATSKRSILSDLVTVYAKGGKTIIFTQTKRDADEVSMVLTNSIASEALH 397

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT
Sbjct: 398  GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 457

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVL---------------- 648
            GRAGKEG A+LM+T++QRRTVKSLE+DVGC FEF+SPPG E+VL                
Sbjct: 458  GRAGKEGTAVLMFTSSQRRTVKSLERDVGCRFEFVSPPGTEEVLESSAEQVIATLSGVHP 517

Query: 647  ---GSXXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
               G              T       A +SGFSQPPSSRSLI+HEQGWTTLQ+TR+   S
Sbjct: 518  ESVGFFTPTAQRLIEEQGTSALAAALAQLSGFSQPPSSRSLISHEQGWTTLQLTRDPSYS 577

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
              G++SAR+VTGFLS VY  AA  +GKIH+IAD+K+QGAVFDLPE+IAK LL K++PPG 
Sbjct: 578  -RGFLSARSVTGFLSDVYTAAADEVGKIHIIADEKVQGAVFDLPEEIAKELLNKQLPPGN 636

Query: 296  TITKISKLPVLEDDGPASDFY 234
            TI+KI+KLP L+DDGP SDFY
Sbjct: 637  TISKITKLPSLQDDGPPSDFY 657



 Score =  177 bits (449), Expect(2) = e-179
 Identities = 90/113 (79%), Positives = 100/113 (88%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVLVPALEGRD+I RAKTGTGKTLAF IPIIK +TE+D+ ++ R  GRLPRVLVLAPT
Sbjct: 147  QRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKCITEDDKSSQRR-TGRLPRVLVLAPT 205

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EI ESAPYL TVCVYGGVSY  Q+N L+RGVD+VVGTPGR+IDL
Sbjct: 206  RELAKQVEKEINESAPYLSTVCVYGGVSYITQRNALSRGVDVVVGTPGRIIDL 258


>ref|XP_020672191.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Dendrobium
            catenatum]
 ref|XP_020672192.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Dendrobium
            catenatum]
 gb|PKU77785.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Dendrobium
            catenatum]
          Length = 772

 Score =  473 bits (1216), Expect(2) = e-178
 Identities = 245/381 (64%), Positives = 290/381 (76%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            D+MLAVGFEEDVE IL+KLP +RQ+MLFSATMPGWV+KL+RKYL+  LTIDLVG+++EKL
Sbjct: 280  DRMLAVGFEEDVEVILEKLPSKRQNMLFSATMPGWVKKLARKYLDNPLTIDLVGEEEEKL 339

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYA+ TTST+KR++L DL+TVYAKGGKTI+FTQTK DADEVS ALT+SIASEALH
Sbjct: 340  AEGIKLYAVSTTSTSKRTILSDLITVYAKGGKTIVFTQTKNDADEVSQALTNSIASEALH 399

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQ+                    DVASRGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 400  GDISQYQRERTLNGFRKGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRT 459

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGSXXXXXXXXXXXXXT 600
            GRAGKEG AILM+T++QRRTVKSLE+DVGC F+FISPP + +VL S             +
Sbjct: 460  GRAGKEGTAILMFTSSQRRTVKSLERDVGCRFDFISPPQIHEVLESSAEQVLATLQGVHS 519

Query: 599  R-------------------XXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                                      AH+SGFSQPPSSRSL++HEQGW TLQ+TRES  S
Sbjct: 520  ESIQFFLPTAQKLIEEKGPDALAAALAHLSGFSQPPSSRSLVSHEQGWVTLQLTRESGYS 579

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
              G+ SAR+VTGFLS VY  AA  +GKIH++AD+ +Q AVFDLPE+IAK LL K++PPG 
Sbjct: 580  -RGFFSARSVTGFLSDVYPAAADEVGKIHLVADESVQAAVFDLPEEIAKELLNKQLPPGN 638

Query: 296  TITKISKLPVLEDDGPASDFY 234
            T+ KI+KLP L+DDGP SD+Y
Sbjct: 639  TLFKITKLPALQDDGPPSDYY 659



 Score =  184 bits (467), Expect(2) = e-178
 Identities = 94/113 (83%), Positives = 101/113 (89%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVL+PALEGRDII RAKTGTGKTLAF IP+IKKLTE +E  R R  GRLPRVLVLAPT
Sbjct: 149  QRAVLIPALEGRDIIARAKTGTGKTLAFGIPVIKKLTEGNEGTRRR-TGRLPRVLVLAPT 207

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESAPYL TVCVYGGVSY +Q+N LTRGVD+VVGTPGR+IDL
Sbjct: 208  RELAKQVEKEIKESAPYLNTVCVYGGVSYNVQQNALTRGVDVVVGTPGRIIDL 260


>gb|KHG19221.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic -like protein
            [Gossypium arboreum]
          Length = 765

 Score =  473 bits (1216), Expect(2) = e-178
 Identities = 254/381 (66%), Positives = 287/381 (75%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEE VE IL+ LP +RQSMLFSATMP WV+KL+RKYL+  L IDLVGD DEKL
Sbjct: 269  DQMLAVGFEEAVEEILENLPSKRQSMLFSATMPSWVKKLARKYLDNPLNIDLVGDGDEKL 328

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAI  T+T+KR++L DL+TVYAKGGKTI+FTQTKRDADEVSMALTSSIASEALH
Sbjct: 329  AEGIKLYAISATATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTSSIASEALH 388

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVASRGLDIPNVDLVIHYELPND ETFVHRSGRT
Sbjct: 389  GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDAETFVHRSGRT 448

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGKEG AILMYTN+QRRTVKSLE+DVGC FEFISPP +E+VL S              
Sbjct: 449  GRAGKEGSAILMYTNSQRRTVKSLERDVGCRFEFISPPSMEEVLESSAEQIIATLNGVHP 508

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                              T       AH+SGFS PPSSRSLI+HEQG+ TLQ+TR+S  S
Sbjct: 509  ESIKFFTPTAQRIIEEQGTSALAAAIAHLSGFSSPPSSRSLISHEQGYVTLQLTRDSTYS 568

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
                ++AR+VTGFLS VY  AA  +GKIH+IAD+++QGAVFDLPE+IA+ LL KE PPG 
Sbjct: 569  -RRVLTARSVTGFLSDVYPAAADEVGKIHLIADERVQGAVFDLPEEIARELLDKETPPGN 627

Query: 296  TITKISKLPVLEDDGPASDFY 234
            TITKI+KLP L+DDGP+SDFY
Sbjct: 628  TITKITKLPPLQDDGPSSDFY 648



 Score =  182 bits (462), Expect(2) = e-178
 Identities = 90/113 (79%), Positives = 102/113 (90%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVLVPAL+GRDII RAKTGTGKTLAF IPIIK++TE++ +   R++GRLPRVLVLAPT
Sbjct: 137  QRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKQITEDEGQRTRRVSGRLPRVLVLAPT 196

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESA YL TVCVYGGVSY LQ+N L+RGVD+VVGTPGR+IDL
Sbjct: 197  RELAKQVEKEIKESASYLNTVCVYGGVSYNLQRNALSRGVDVVVGTPGRIIDL 249


>ref|XP_020099826.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1
            [Ananas comosus]
          Length = 768

 Score =  481 bits (1238), Expect(2) = e-178
 Identities = 251/381 (65%), Positives = 293/381 (76%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVE ILQKLP +RQ+MLFSATMPGWV+KL+R+YLN  LTIDLVGD DEKL
Sbjct: 288  DQMLAVGFEEDVEVILQKLPSERQNMLFSATMPGWVKKLARRYLNDPLTIDLVGDHDEKL 347

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIPTT+T+KR++L DL+TVYAKGGKTI+FTQTKRDADEVSMALT+ IASEALH
Sbjct: 348  AEGIKLYAIPTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTNIIASEALH 407

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 408  GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 467

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGKEG AILM+T++QRRTVKSLE+DVGC+FEFISPP +++VL S              
Sbjct: 468  GRAGKEGTAILMFTSSQRRTVKSLERDVGCHFEFISPPSMQEVLESSAEQVVATLQGVHP 527

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                              T       AH+SGFSQPPSSRSLI+HEQGW TLQ+ RE   S
Sbjct: 528  ESIQYFLPTAERLTQELGTNALAAALAHLSGFSQPPSSRSLISHEQGWVTLQLVREPGYS 587

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
              G+ SAR+VTGFLS VY+ AA  +GKI+++AD+++QGAVFDLPE+IAK LL K+ PPG 
Sbjct: 588  -RGFFSARSVTGFLSDVYSAAADEVGKIYLLADEQVQGAVFDLPEEIAKELLNKQFPPGN 646

Query: 296  TITKISKLPVLEDDGPASDFY 234
            TI+K++KLP L+DDGP +D Y
Sbjct: 647  TISKVTKLPPLQDDGPPTDNY 667



 Score =  173 bits (439), Expect(2) = e-178
 Identities = 90/113 (79%), Positives = 98/113 (86%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVLVPALEGRD+I RAKTGTGKTLAF IPIIK LT+E ++   RL GRLPR LVLAPT
Sbjct: 157  QRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKGLTQEGQQTSRRL-GRLPRALVLAPT 215

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESAP L TVCVYGGVSY +Q+  L+RGVD+VVGTPGRLIDL
Sbjct: 216  RELAKQVEKEIKESAPNLSTVCVYGGVSYNVQQGALSRGVDVVVGTPGRLIDL 268


>ref|XP_020099828.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X3
            [Ananas comosus]
          Length = 767

 Score =  481 bits (1238), Expect(2) = e-178
 Identities = 251/381 (65%), Positives = 293/381 (76%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVE ILQKLP +RQ+MLFSATMPGWV+KL+R+YLN  LTIDLVGD DEKL
Sbjct: 288  DQMLAVGFEEDVEVILQKLPSERQNMLFSATMPGWVKKLARRYLNDPLTIDLVGDHDEKL 347

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIPTT+T+KR++L DL+TVYAKGGKTI+FTQTKRDADEVSMALT+ IASEALH
Sbjct: 348  AEGIKLYAIPTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTNIIASEALH 407

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 408  GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 467

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGKEG AILM+T++QRRTVKSLE+DVGC+FEFISPP +++VL S              
Sbjct: 468  GRAGKEGTAILMFTSSQRRTVKSLERDVGCHFEFISPPSMQEVLESSAEQVVATLQGVHP 527

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                              T       AH+SGFSQPPSSRSLI+HEQGW TLQ+ RE   S
Sbjct: 528  ESIQYFLPTAERLTQELGTNALAAALAHLSGFSQPPSSRSLISHEQGWVTLQLVREPGYS 587

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
              G+ SAR+VTGFLS VY+ AA  +GKI+++AD+++QGAVFDLPE+IAK LL K+ PPG 
Sbjct: 588  -RGFFSARSVTGFLSDVYSAAADEVGKIYLLADEQVQGAVFDLPEEIAKELLNKQFPPGN 646

Query: 296  TITKISKLPVLEDDGPASDFY 234
            TI+K++KLP L+DDGP +D Y
Sbjct: 647  TISKVTKLPPLQDDGPPTDNY 667



 Score =  173 bits (439), Expect(2) = e-178
 Identities = 90/113 (79%), Positives = 98/113 (86%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVLVPALEGRD+I RAKTGTGKTLAF IPIIK LT+E ++   RL GRLPR LVLAPT
Sbjct: 157  QRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKGLTQEGQQTSRRL-GRLPRALVLAPT 215

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESAP L TVCVYGGVSY +Q+  L+RGVD+VVGTPGRLIDL
Sbjct: 216  RELAKQVEKEIKESAPNLSTVCVYGGVSYNVQQGALSRGVDVVVGTPGRLIDL 268


>ref|XP_015630408.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            isoform X1 [Oryza sativa Japonica Group]
 sp|Q0DM51.2|RH3_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 3, chloroplastic;
            Flags: Precursor
 gb|AAL79753.1|AC096687_17 putative RNA helicase [Oryza sativa Japonica Group]
          Length = 758

 Score =  482 bits (1241), Expect(2) = e-177
 Identities = 254/382 (66%), Positives = 293/382 (76%), Gaps = 38/382 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVETILQ+LP +RQSMLFSATMPGWV+KLSR+YLN  LTIDLVGDQDEKL
Sbjct: 262  DQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKL 321

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIP TST+KR++L DL+TVYAKGGKTI+FT+TKRDADEVS+ALT+SIASEALH
Sbjct: 322  AEGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALH 381

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 382  GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 441

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGSXXXXXXXXXXXXXT 600
            GRAGK G AILM+TN+QRRTV+SLE+DVGC F+FISPP +EDVL S             T
Sbjct: 442  GRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHT 501

Query: 599  -------------------RXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                                      AH+SGFSQPPSSRSLI+HEQGW TLQ+TR  D  
Sbjct: 502  ESIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTR--DPG 559

Query: 476  IG-GYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPG 300
             G G+ S R+VTGFLS V + AA  +GKI + AD+K+QGAVFDLPE+IA++LL+ E+PPG
Sbjct: 560  YGRGFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPG 619

Query: 299  TTITKISKLPVLEDDGPASDFY 234
             TITK++KLP L+DDGPA+D Y
Sbjct: 620  NTITKVTKLPALQDDGPATDSY 641



 Score =  172 bits (435), Expect(2) = e-177
 Identities = 87/113 (76%), Positives = 100/113 (88%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVL+PAL+GRD+I RAKTGTGKTLAF IP+IK+L EED+  R+   GR+PRVLVLAPT
Sbjct: 131  QRAVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDD-GRSVRRGRIPRVLVLAPT 189

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESAP L TVCVYGGVSY +Q+N L+RGVD+VVGTPGR+IDL
Sbjct: 190  RELAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDL 242


>ref|XP_015630409.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            isoform X2 [Oryza sativa Japonica Group]
          Length = 757

 Score =  482 bits (1241), Expect(2) = e-177
 Identities = 254/382 (66%), Positives = 293/382 (76%), Gaps = 38/382 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVETILQ+LP +RQSMLFSATMPGWV+KLSR+YLN  LTIDLVGDQDEKL
Sbjct: 262  DQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKL 321

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIP TST+KR++L DL+TVYAKGGKTI+FT+TKRDADEVS+ALT+SIASEALH
Sbjct: 322  AEGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALH 381

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 382  GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 441

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGSXXXXXXXXXXXXXT 600
            GRAGK G AILM+TN+QRRTV+SLE+DVGC F+FISPP +EDVL S             T
Sbjct: 442  GRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHT 501

Query: 599  -------------------RXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                                      AH+SGFSQPPSSRSLI+HEQGW TLQ+TR  D  
Sbjct: 502  ESIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTR--DPG 559

Query: 476  IG-GYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPG 300
             G G+ S R+VTGFLS V + AA  +GKI + AD+K+QGAVFDLPE+IA++LL+ E+PPG
Sbjct: 560  YGRGFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPG 619

Query: 299  TTITKISKLPVLEDDGPASDFY 234
             TITK++KLP L+DDGPA+D Y
Sbjct: 620  NTITKVTKLPALQDDGPATDSY 641



 Score =  172 bits (435), Expect(2) = e-177
 Identities = 87/113 (76%), Positives = 100/113 (88%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVL+PAL+GRD+I RAKTGTGKTLAF IP+IK+L EED+  R+   GR+PRVLVLAPT
Sbjct: 131  QRAVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDD-GRSVRRGRIPRVLVLAPT 189

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESAP L TVCVYGGVSY +Q+N L+RGVD+VVGTPGR+IDL
Sbjct: 190  RELAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDL 242


>dbj|BAF13687.1| Os03g0827700, partial [Oryza sativa Japonica Group]
 dbj|BAS87169.1| Os03g0827700, partial [Oryza sativa Japonica Group]
          Length = 723

 Score =  482 bits (1241), Expect(2) = e-177
 Identities = 254/382 (66%), Positives = 293/382 (76%), Gaps = 38/382 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVETILQ+LP +RQSMLFSATMPGWV+KLSR+YLN  LTIDLVGDQDEKL
Sbjct: 227  DQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKL 286

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIP TST+KR++L DL+TVYAKGGKTI+FT+TKRDADEVS+ALT+SIASEALH
Sbjct: 287  AEGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALH 346

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 347  GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 406

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGSXXXXXXXXXXXXXT 600
            GRAGK G AILM+TN+QRRTV+SLE+DVGC F+FISPP +EDVL S             T
Sbjct: 407  GRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHT 466

Query: 599  -------------------RXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                                      AH+SGFSQPPSSRSLI+HEQGW TLQ+TR  D  
Sbjct: 467  ESIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTR--DPG 524

Query: 476  IG-GYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPG 300
             G G+ S R+VTGFLS V + AA  +GKI + AD+K+QGAVFDLPE+IA++LL+ E+PPG
Sbjct: 525  YGRGFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPG 584

Query: 299  TTITKISKLPVLEDDGPASDFY 234
             TITK++KLP L+DDGPA+D Y
Sbjct: 585  NTITKVTKLPALQDDGPATDSY 606



 Score =  172 bits (435), Expect(2) = e-177
 Identities = 87/113 (76%), Positives = 100/113 (88%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVL+PAL+GRD+I RAKTGTGKTLAF IP+IK+L EED+  R+   GR+PRVLVLAPT
Sbjct: 96   QRAVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDD-GRSVRRGRIPRVLVLAPT 154

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESAP L TVCVYGGVSY +Q+N L+RGVD+VVGTPGR+IDL
Sbjct: 155  RELAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDL 207


>gb|PPR96922.1| hypothetical protein GOBAR_AA23738 [Gossypium barbadense]
          Length = 772

 Score =  471 bits (1211), Expect(2) = e-177
 Identities = 253/381 (66%), Positives = 286/381 (75%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEE VE IL+ LP +RQSMLFSATMP WV+KL+RKYL+  L IDLVGD DEKL
Sbjct: 269  DQMLAVGFEEAVEEILENLPSKRQSMLFSATMPSWVKKLARKYLDNPLNIDLVGDGDEKL 328

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAI  T+T+KR++L DL+TVYAKGGKTI+FTQTKRDADEVSMALTSSIASEALH
Sbjct: 329  AEGIKLYAISATATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTSSIASEALH 388

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVASRGLDIPNVDLVIHYELPND ETFVHRSGRT
Sbjct: 389  GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDAETFVHRSGRT 448

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGKEG AILMYTN+QRRTVKSLE+DVGC FEFISPP +E+VL S              
Sbjct: 449  GRAGKEGSAILMYTNSQRRTVKSLERDVGCRFEFISPPSMEEVLESSAEQIITTLNGVHP 508

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                                      AH+SGFS PPSSRSLI+HEQG+ TLQ+TR+S  S
Sbjct: 509  ESIKFFTPTAQRIIEEQGASALAAAIAHLSGFSSPPSSRSLISHEQGYVTLQLTRDSTYS 568

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
                ++AR+VTGFLS VY  AA  +GKIH+IAD+++QGAVFDLPE+IA+ LL KE PPG 
Sbjct: 569  -RRVLTARSVTGFLSDVYPAAADEVGKIHLIADERVQGAVFDLPEEIARELLDKETPPGN 627

Query: 296  TITKISKLPVLEDDGPASDFY 234
            TITKI+KLP L+DDGP+SDFY
Sbjct: 628  TITKITKLPPLQDDGPSSDFY 648



 Score =  182 bits (462), Expect(2) = e-177
 Identities = 90/113 (79%), Positives = 102/113 (90%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVLVPAL+GRDII RAKTGTGKTLAF IPIIK++TE++ +   R++GRLPRVLVLAPT
Sbjct: 137  QRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKQITEDEGQRTRRVSGRLPRVLVLAPT 196

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESA YL TVCVYGGVSY LQ+N L+RGVD+VVGTPGR+IDL
Sbjct: 197  RELAKQVEKEIKESASYLNTVCVYGGVSYNLQRNALSRGVDVVVGTPGRIIDL 249


>ref|XP_020099827.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X2
            [Ananas comosus]
          Length = 767

 Score =  481 bits (1238), Expect(2) = e-177
 Identities = 251/381 (65%), Positives = 293/381 (76%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVE ILQKLP +RQ+MLFSATMPGWV+KL+R+YLN  LTIDLVGD DEKL
Sbjct: 287  DQMLAVGFEEDVEVILQKLPSERQNMLFSATMPGWVKKLARRYLNDPLTIDLVGDHDEKL 346

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIPTT+T+KR++L DL+TVYAKGGKTI+FTQTKRDADEVSMALT+ IASEALH
Sbjct: 347  AEGIKLYAIPTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTNIIASEALH 406

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 407  GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 466

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGKEG AILM+T++QRRTVKSLE+DVGC+FEFISPP +++VL S              
Sbjct: 467  GRAGKEGTAILMFTSSQRRTVKSLERDVGCHFEFISPPSMQEVLESSAEQVVATLQGVHP 526

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                              T       AH+SGFSQPPSSRSLI+HEQGW TLQ+ RE   S
Sbjct: 527  ESIQYFLPTAERLTQELGTNALAAALAHLSGFSQPPSSRSLISHEQGWVTLQLVREPGYS 586

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
              G+ SAR+VTGFLS VY+ AA  +GKI+++AD+++QGAVFDLPE+IAK LL K+ PPG 
Sbjct: 587  -RGFFSARSVTGFLSDVYSAAADEVGKIYLLADEQVQGAVFDLPEEIAKELLNKQFPPGN 645

Query: 296  TITKISKLPVLEDDGPASDFY 234
            TI+K++KLP L+DDGP +D Y
Sbjct: 646  TISKVTKLPPLQDDGPPTDNY 666



 Score =  171 bits (434), Expect(2) = e-177
 Identities = 89/113 (78%), Positives = 97/113 (85%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVLVPALEGRD+I RAKTGTGKTLAF IPIIK LT+E ++ R    GRLPR LVLAPT
Sbjct: 157  QRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKGLTQEGQQTRR--LGRLPRALVLAPT 214

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESAP L TVCVYGGVSY +Q+  L+RGVD+VVGTPGRLIDL
Sbjct: 215  RELAKQVEKEIKESAPNLSTVCVYGGVSYNVQQGALSRGVDVVVGTPGRLIDL 267


>ref|XP_017637445.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Gossypium arboreum]
          Length = 750

 Score =  470 bits (1210), Expect(2) = e-177
 Identities = 253/381 (66%), Positives = 286/381 (75%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEE VE IL+ LP +RQSMLFSATMP WV+KL+RKYL+  L IDLVGD DEKL
Sbjct: 269  DQMLAVGFEEAVEEILENLPSKRQSMLFSATMPSWVKKLARKYLDNPLNIDLVGDGDEKL 328

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAI  T+T+KR++L DL+TVYAKGGKTI+FTQTKRDADEVSMALTSSIASEALH
Sbjct: 329  AEGIKLYAISATATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTSSIASEALH 388

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVASRGLDIPNVDLVIHYELPND ETFVHRSGRT
Sbjct: 389  GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDAETFVHRSGRT 448

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGKEG AILMYTN+QRRTVKSLE+DVGC FEFISPP +E+VL S              
Sbjct: 449  GRAGKEGSAILMYTNSQRRTVKSLERDVGCRFEFISPPSMEEVLESSAEQIIATLNGVHP 508

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                              T       AH+SGFS PPSSRSLI+HEQG+ TLQ+TR+S  S
Sbjct: 509  ESIKFFTPTAQRIIEEQGTSALAAAIAHLSGFSSPPSSRSLISHEQGYVTLQLTRDSTYS 568

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
                ++AR+VTGFLS VY  AA  +GKIH+IAD+++QGAVFDLPE+IA+ LL KE PPG 
Sbjct: 569  -RRVLTARSVTGFLSDVYPAAADEVGKIHLIADERVQGAVFDLPEEIARELLDKETPPGN 627

Query: 296  TITKISKLPVLEDDGPASDFY 234
            TI KI+KLP L+DDGP+SDFY
Sbjct: 628  TIKKITKLPPLQDDGPSSDFY 648



 Score =  182 bits (462), Expect(2) = e-177
 Identities = 90/113 (79%), Positives = 102/113 (90%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVLVPAL+GRDII RAKTGTGKTLAF IPIIK++TE++ +   R++GRLPRVLVLAPT
Sbjct: 137  QRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKQITEDEGQRTRRVSGRLPRVLVLAPT 196

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESA YL TVCVYGGVSY LQ+N L+RGVD+VVGTPGR+IDL
Sbjct: 197  RELAKQVEKEIKESASYLNTVCVYGGVSYNLQRNALSRGVDVVVGTPGRIIDL 249


>gb|EEC76452.1| hypothetical protein OsI_14162 [Oryza sativa Indica Group]
          Length = 779

 Score =  482 bits (1241), Expect(2) = e-177
 Identities = 254/382 (66%), Positives = 293/382 (76%), Gaps = 38/382 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVETILQ+LP +RQSMLFSATMPGWV+KLSR+YLN  LTIDLVGDQDEKL
Sbjct: 283  DQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKL 342

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIP TST+KR++L DL+TVYAKGGKTI+FT+TKRDADEVS+ALT+SIASEALH
Sbjct: 343  AEGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALH 402

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 403  GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 462

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGSXXXXXXXXXXXXXT 600
            GRAGK G AILM+TN+QRRTV+SLE+DVGC F+FISPP +EDVL S             T
Sbjct: 463  GRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHT 522

Query: 599  -------------------RXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                                      AH+SGFSQPPSSRSLI+HEQGW TLQ+TR  D  
Sbjct: 523  ESIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTR--DPG 580

Query: 476  IG-GYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPG 300
             G G+ S R+VTGFLS V + AA  +GKI + AD+K+QGAVFDLPE+IA++LL+ E+PPG
Sbjct: 581  YGRGFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPG 640

Query: 299  TTITKISKLPVLEDDGPASDFY 234
             TITK++KLP L+DDGPA+D Y
Sbjct: 641  NTITKVTKLPALQDDGPATDSY 662



 Score =  170 bits (430), Expect(2) = e-177
 Identities = 86/112 (76%), Positives = 99/112 (88%)
 Frame = -1

Query: 1612 RAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPTR 1433
            RAVL+PAL+GRD+I RAKTGTGKTLAF IP+IK+L EED+  R+   GR+PRVLVLAPTR
Sbjct: 153  RAVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDD-GRSVRRGRIPRVLVLAPTR 211

Query: 1432 ELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            ELAKQVE EIKESAP L TVCVYGGVSY +Q+N L+RGVD+VVGTPGR+IDL
Sbjct: 212  ELAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDL 263


>gb|PKA48882.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Apostasia
            shenzhenica]
          Length = 755

 Score =  471 bits (1212), Expect(2) = e-176
 Identities = 250/392 (63%), Positives = 292/392 (74%), Gaps = 48/392 (12%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLV------- 1107
            DQMLAVGFEEDVE IL+KLP +RQSMLFSATMPGWV+KL+RKYL+K LTIDLV       
Sbjct: 272  DQMLAVGFEEDVEVILEKLPSERQSMLFSATMPGWVKKLARKYLDKPLTIDLVTTRSLAA 331

Query: 1106 ----GDQDEKLAEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMA 939
                GD++EKLAEGIKLYA+PTT+T KR++L DL+TVYAKGGKTI+FTQTKRDADEVS+A
Sbjct: 332  YTIVGDEEEKLAEGIKLYAVPTTATAKRTILSDLITVYAKGGKTIVFTQTKRDADEVSVA 391

Query: 938  LTSSIASEALHGDISQHXX------------------DVASRGLDIPNVDLVIHYELPND 813
            LT+SIASEALHGDISQ+                    DVA+RGLDIPNVDL+IHYELPND
Sbjct: 392  LTNSIASEALHGDISQYQRERTLNGFRQGRFTVLVATDVAARGLDIPNVDLIIHYELPND 451

Query: 812  PETFVHRSGRTGRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGSXXX 633
            PETFVHRSGRTGRAGKEG AILM+T++QRRTVKSLE+DVGC F+FISPP +++VL S   
Sbjct: 452  PETFVHRSGRTGRAGKEGLAILMFTSSQRRTVKSLERDVGCRFDFISPPQIQEVLESSAQ 511

Query: 632  XXXXXXXXXXT-------------------RXXXXXXAHMSGFSQPPSSRSLITHEQGWT 510
                                                 AH+SGFSQPPSSRSLI HEQGW 
Sbjct: 512  QVLATLQGVHAESIQHFLPTAQKLIGEEGPHAFAAALAHLSGFSQPPSSRSLINHEQGWV 571

Query: 509  TLQMTRESDSSIGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAK 330
            TLQ+TRE   S  GY+SAR+VTGFL+  Y  AA  +GKIH++AD +IQGAVFDLPE+IAK
Sbjct: 572  TLQLTREPGYS-RGYLSARSVTGFLADFYPAAADEVGKIHLVADDRIQGAVFDLPEEIAK 630

Query: 329  NLLTKEMPPGTTITKISKLPVLEDDGPASDFY 234
            +LL KE+ PG T++KI+KLP L+DD P SDFY
Sbjct: 631  DLLNKEISPGNTLSKITKLPALQDDDPPSDFY 662



 Score =  179 bits (453), Expect(2) = e-176
 Identities = 89/113 (78%), Positives = 100/113 (88%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVL+PALEGRD+I RAKTGTGKTLAF IP+IK+L E+D+  R R AGR PRVL+LAPT
Sbjct: 141  QRAVLIPALEGRDLIARAKTGTGKTLAFGIPVIKRLMEDDQGQRRR-AGRFPRVLILAPT 199

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKE+APYL TVCVYGGVSY +Q+N L RGVD+VVGTPGRLIDL
Sbjct: 200  RELAKQVEKEIKETAPYLGTVCVYGGVSYNVQQNALARGVDVVVGTPGRLIDL 252


>gb|OAY71442.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Ananas comosus]
          Length = 799

 Score =  476 bits (1225), Expect(2) = e-175
 Identities = 249/381 (65%), Positives = 291/381 (76%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVE ILQKLP +RQ+MLFSATMPGWV+KL+R+YLN  +TIDLVGD DEKL
Sbjct: 291  DQMLAVGFEEDVEVILQKLPSERQNMLFSATMPGWVKKLARRYLNDPMTIDLVGDHDEKL 350

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIPTT+T+KR++L DL+TVYAKGGKTI+FTQTKRDADEVSMALT+ IASEALH
Sbjct: 351  AEGIKLYAIPTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTNIIASEALH 410

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 411  GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 470

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGKEG AILM+T++QRRTVKSLE+DVGC+FEFISPP ++ VL S              
Sbjct: 471  GRAGKEGTAILMFTSSQRRTVKSLERDVGCHFEFISPPSMQVVLESSAEQVVATLQGVHP 530

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                                      AH+SGFSQPPSSRSLI+HEQGW TLQ+ RE   S
Sbjct: 531  ESIQYFLPTAERLTQELGINALAAALAHLSGFSQPPSSRSLISHEQGWVTLQLVREPGYS 590

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
              G+ SAR+VTGFLS VY+ AA  +GKI+++AD+++QGAVFDLPE+IAK LL K+ PPG 
Sbjct: 591  -RGFFSARSVTGFLSDVYSAAADEVGKIYLLADEQVQGAVFDLPEEIAKELLNKQFPPGN 649

Query: 296  TITKISKLPVLEDDGPASDFY 234
            TI+K++KLP L+DDGP +D Y
Sbjct: 650  TISKVTKLPPLQDDGPPTDNY 670



 Score =  171 bits (434), Expect(2) = e-175
 Identities = 89/113 (78%), Positives = 97/113 (85%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVLVPALEGRD+I RAKTGTGKTLAF IPIIK LT+E ++ R    GRLPR LVLAPT
Sbjct: 161  QRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKGLTQEGQQTRR--LGRLPRALVLAPT 218

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESAP L TVCVYGGVSY +Q+  L+RGVD+VVGTPGRLIDL
Sbjct: 219  RELAKQVEKEIKESAPNLSTVCVYGGVSYNVQQGALSRGVDVVVGTPGRLIDL 271


>gb|ACG27839.1| nucleolar RNA helicase 2 [Zea mays]
          Length = 744

 Score =  478 bits (1229), Expect(2) = e-175
 Identities = 251/381 (65%), Positives = 290/381 (76%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1265 DQMLAVGFEEDVETILQKLPPQRQSMLFSATMPGWVQKLSRKYLNKALTIDLVGDQDEKL 1086
            DQMLAVGFEEDVETILQ+LP  RQSMLFSATMP WV+KLSR+YLN  LTIDLVGDQDEKL
Sbjct: 246  DQMLAVGFEEDVETILQQLPAGRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKL 305

Query: 1085 AEGIKLYAIPTTSTTKRSMLGDLVTVYAKGGKTIIFTQTKRDADEVSMALTSSIASEALH 906
            AEGIKLYAIP T+T+KR++L DL+TVYAKGGKTI+FT+TK+DADEVS+ALT+SIASEALH
Sbjct: 306  AEGIKLYAIPLTATSKRTVLSDLITVYAKGGKTIVFTRTKKDADEVSLALTNSIASEALH 365

Query: 905  GDISQH------------------XXDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 780
            GDISQH                    DVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRT
Sbjct: 366  GDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRT 425

Query: 779  GRAGKEGKAILMYTNNQRRTVKSLEKDVGCNFEFISPPGVEDVLGS-------------- 642
            GRAGK G AILM+T++Q+RTVKSLE+DVGCNFEFISPP +E+VL S              
Sbjct: 426  GRAGKAGTAILMFTSSQKRTVKSLERDVGCNFEFISPPSIEEVLESSAEHVIATLRGVHP 485

Query: 641  -----XXXXXXXXXXXXXTRXXXXXXAHMSGFSQPPSSRSLITHEQGWTTLQMTRESDSS 477
                                      AH+SGFSQPPSSRSLI+HEQGW TLQ+TRE    
Sbjct: 486  ESTKYFLGAAEKLTEELGPHALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGFG 545

Query: 476  IGGYMSARTVTGFLSSVYATAAGVLGKIHVIADKKIQGAVFDLPEDIAKNLLTKEMPPGT 297
              G+ S R+VTGFLS V + AA  +GKI++ AD+ +QGAVFDLPE+IAK+LLT E+PPG 
Sbjct: 546  -RGFFSPRSVTGFLSDVCSAAADEVGKIYLTADENVQGAVFDLPEEIAKDLLTMELPPGN 604

Query: 296  TITKISKLPVLEDDGPASDFY 234
            T+TKISKLP L+DDGPA+D Y
Sbjct: 605  TLTKISKLPALQDDGPATDSY 625



 Score =  170 bits (430), Expect(2) = e-175
 Identities = 87/113 (76%), Positives = 98/113 (86%)
 Frame = -1

Query: 1615 QRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKKLTEEDEENRNRLAGRLPRVLVLAPT 1436
            QRAVL+PALEGRD+I RAKTGTGKTLAF IP+IK+L E+D+    R  GR PRVLVLAPT
Sbjct: 115  QRAVLIPALEGRDLIARAKTGTGKTLAFGIPMIKQLIEQDDGRITR-RGRTPRVLVLAPT 173

Query: 1435 RELAKQVENEIKESAPYLRTVCVYGGVSYTLQKNQLTRGVDIVVGTPGRLIDL 1277
            RELAKQVE EIKESAP L TVCVYGGVSY +Q+N L+RGVD+VVGTPGR+IDL
Sbjct: 174  RELAKQVEKEIKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDL 226