BLASTX nr result

ID: Chrysanthemum22_contig00002316 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00002316
         (473 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI06909.1| hypothetical protein Ccrd_014734 [Cynara carduncu...    78   1e-15
ref|XP_023756641.1| glutamyl-tRNA(Gln) amidotransferase subunit ...    76   1e-14
ref|XP_022022080.1| glutamyl-tRNA(Gln) amidotransferase subunit ...    72   7e-13

>gb|KVI06909.1| hypothetical protein Ccrd_014734 [Cynara cardunculus var. scolymus]
          Length = 123

 Score = 78.2 bits (191), Expect = 1e-15
 Identities = 39/58 (67%), Positives = 46/58 (79%)
 Frame = +2

Query: 299 MGSRALVLLAPVVLSERSLLNQLSKCGFHQALRQKDNRLRVGVRDYSVHSSLERPNVA 472
           MGSRAL+LLAP  L++R L+N  S  GF QA R K+  LRVGVR+YSVHSSLERPNV+
Sbjct: 1   MGSRALLLLAPAFLADRILVNHFSISGFRQAFRPKEEMLRVGVRNYSVHSSLERPNVS 58


>ref|XP_023756641.1| glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial [Lactuca sativa]
 ref|XP_023756642.1| glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial [Lactuca sativa]
 gb|PLY90738.1| hypothetical protein LSAT_3X27161 [Lactuca sativa]
          Length = 146

 Score = 76.3 bits (186), Expect = 1e-14
 Identities = 36/57 (63%), Positives = 46/57 (80%)
 Frame = +2

Query: 299 MGSRALVLLAPVVLSERSLLNQLSKCGFHQALRQKDNRLRVGVRDYSVHSSLERPNV 469
           MGSRAL++LAP  LSE  LLN +S+ GFHQ L Q + R+RVG R+YS+HS+LERP+V
Sbjct: 1   MGSRALLVLAPAFLSESILLNHISRSGFHQLLTQNEKRVRVGGRNYSIHSNLERPDV 57


>ref|XP_022022080.1| glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial [Helianthus annuus]
 ref|XP_022022081.1| glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial [Helianthus annuus]
          Length = 146

 Score = 71.6 bits (174), Expect = 7e-13
 Identities = 35/58 (60%), Positives = 44/58 (75%)
 Frame = +2

Query: 299 MGSRALVLLAPVVLSERSLLNQLSKCGFHQALRQKDNRLRVGVRDYSVHSSLERPNVA 472
           MGSR L+LL+P   S+  LL+Q +K GFHQ +RQ +  +R GVR YSVHSSLERP+VA
Sbjct: 1   MGSRVLLLLSPAFRSDHVLLSQFTKYGFHQTVRQTEKMVRGGVRKYSVHSSLERPDVA 58


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