BLASTX nr result

ID: Chrysanthemum22_contig00002005 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00002005
         (355 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022006026.1| sister chromatid cohesion 1 protein 4-like [...   103   3e-23
gb|KVI09560.1| hypothetical protein Ccrd_012050 [Cynara carduncu...   100   6e-22
ref|XP_021973110.1| sister chromatid cohesion 1 protein 4-like [...    98   3e-21
ref|XP_023767775.1| sister chromatid cohesion 1 protein 4-like [...    75   3e-13
gb|PLY82509.1| hypothetical protein LSAT_2X108360 [Lactuca sativa]     75   3e-13

>ref|XP_022006026.1| sister chromatid cohesion 1 protein 4-like [Helianthus annuus]
 gb|OTF99279.1| putative rad21/Rec8-like protein [Helianthus annuus]
          Length = 1256

 Score =  103 bits (257), Expect = 3e-23
 Identities = 58/120 (48%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
 Frame = -3

Query: 353  NGIFGEDHATVGAYDTEVNAVLEDAPLDDRENPGHQVTFQTDVEEIPPDNSGHQVTFQTD 174
            NGIFGE+  TV AYDTEVN VLE+  LD+RENPGH VTF+T                + +
Sbjct: 1074 NGIFGEEFGTVAAYDTEVNPVLENVTLDERENPGHHVTFETT---------------EMN 1118

Query: 173  VEEIPPDNKVDDDELGYSGVGNDTEFLNF---XXXXXXXXXXXXXXVEATRVIDNSGWSS 3
             E+IP DN+VDD E+ +  V N+T+FLNF                 V+A RVIDNSGWSS
Sbjct: 1119 AEDIPADNRVDDAEITHPAVENNTDFLNFDDLDDDDADAGGDYAPDVDAPRVIDNSGWSS 1178


>gb|KVI09560.1| hypothetical protein Ccrd_012050 [Cynara cardunculus var. scolymus]
          Length = 569

 Score = 99.8 bits (247), Expect = 6e-22
 Identities = 58/121 (47%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
 Frame = -3

Query: 353 NGIFGEDHATVGAYDTEVNAVLEDAPLDDRENPGHQVTFQTDVEEIPPDNSGHQVTFQTD 174
           NGI GE+  T  AYD EVN VLED  LD+RENPGHQVTF                     
Sbjct: 386 NGIHGEEFVTAAAYDEEVNPVLEDVSLDERENPGHQVTFPMTA---------------MS 430

Query: 173 VEEIPPDNKVDDDELGYSGVGNDTEFLNF----XXXXXXXXXXXXXXVEATRVIDNSGWS 6
           VE+   +N+ DD+E  YS VGNDT+FLNF                   EATRVIDNSGWS
Sbjct: 431 VEDSTVNNRDDDNEFTYSAVGNDTDFLNFDDADDDEEAETAGDYMPDTEATRVIDNSGWS 490

Query: 5   S 3
           S
Sbjct: 491 S 491


>ref|XP_021973110.1| sister chromatid cohesion 1 protein 4-like [Helianthus annuus]
 gb|OTG20589.1| putative rad21/Rec8-like protein [Helianthus annuus]
          Length = 1297

 Score = 97.8 bits (242), Expect = 3e-21
 Identities = 57/120 (47%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
 Frame = -3

Query: 353  NGIFGEDHATVGAYDTEVNAVLEDAPLDDRENPGHQVTFQTDVEEIPPDNSGHQVTFQTD 174
            NGIFGE++ T+GAYDTEV+  L +  LD+REN GHQVTF+T                  D
Sbjct: 1112 NGIFGEEYGTIGAYDTEVDPSLPNVSLDERENTGHQVTFETTEMN------------AED 1159

Query: 173  VEEIPPDNKVDDDELGYSGVGNDTEFLNF---XXXXXXXXXXXXXXVEATRVIDNSGWSS 3
            V   P  N+VDDDE  +  V N+T+FLNF                 VEATRVIDNSGWSS
Sbjct: 1160 VSADPASNRVDDDESTHPAVENNTDFLNFDDGDDDGADAGGDYGTDVEATRVIDNSGWSS 1219


>ref|XP_023767775.1| sister chromatid cohesion 1 protein 4-like [Lactuca sativa]
          Length = 1494

 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
 Frame = -3

Query: 347  IFGEDHATVGAYDTEVNAVLEDAPLDDRENPGHQVTFQTDVEEIPPDNSGHQVTFQTDVE 168
            +FGE    V AYD   N VLED  LD+RE  GH VT                 T   ++E
Sbjct: 1317 VFGE---AVAAYDAVDNQVLEDILLDEREKAGHDVT-----------------TTSLNLE 1356

Query: 167  EIPPDNKVD-DDELGYSGVGNDTEFLNF----XXXXXXXXXXXXXXVEATRVIDNSGWSS 3
            +IP DN+VD DD+  YSGV NDT+FLNF                   E T+++DN+GWSS
Sbjct: 1357 DIPTDNRVDADDDHMYSGVANDTDFLNFDDVDDDEAGEAADDYMPDGEETKMLDNTGWSS 1416


>gb|PLY82509.1| hypothetical protein LSAT_2X108360 [Lactuca sativa]
          Length = 1886

 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
 Frame = -3

Query: 347  IFGEDHATVGAYDTEVNAVLEDAPLDDRENPGHQVTFQTDVEEIPPDNSGHQVTFQTDVE 168
            +FGE    V AYD   N VLED  LD+RE  GH VT                 T   ++E
Sbjct: 1317 VFGE---AVAAYDAVDNQVLEDILLDEREKAGHDVT-----------------TTSLNLE 1356

Query: 167  EIPPDNKVD-DDELGYSGVGNDTEFLNF----XXXXXXXXXXXXXXVEATRVIDNSGWSS 3
            +IP DN+VD DD+  YSGV NDT+FLNF                   E T+++DN+GWSS
Sbjct: 1357 DIPTDNRVDADDDHMYSGVANDTDFLNFDDVDDDEAGEAADDYMPDGEETKMLDNTGWSS 1416


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