BLASTX nr result
ID: Chrysanthemum22_contig00001806
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00001806
(2170 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKA63792.1| Retrovirus-related Pol polyprotein from transposo... 245 e-103
ref|XP_020197777.1| uncharacterized protein LOC109783596 [Aegilo... 242 9e-98
ref|XP_009368272.2| PREDICTED: uncharacterized protein LOC103957... 223 1e-96
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 234 4e-96
gb|AUT19993.1| orf490 (mitochondrion) [Oryza coarctata] 243 7e-96
ref|XP_021995975.1| uncharacterized protein LOC110893163 [Helian... 308 3e-95
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 231 5e-95
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 244 5e-95
ref|YP_514636.1| hypothetical protein OrsaiPp07 (mitochondrion) ... 240 6e-95
gb|AAB82754.1| retrofit [Oryza longistaminata] 238 3e-94
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 238 3e-94
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 236 4e-94
ref|YP_002000554.1| orf490 (mitochondrion) [Oryza sativa Japonic... 240 5e-94
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 228 6e-94
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 242 8e-94
ref|YP_009241997.1| hypothetical protein (mitochondrion) [Oryza ... 236 8e-94
ref|XP_021319227.1| uncharacterized protein LOC110436454 [Sorghu... 243 2e-93
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] >gi... 224 3e-93
ref|XP_022032011.1| uncharacterized protein LOC110933078 [Helian... 302 3e-93
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 224 6e-93
>gb|PKA63792.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 500
Score = 245 bits (625), Expect(4) = e-103
Identities = 132/285 (46%), Positives = 176/285 (61%), Gaps = 3/285 (1%)
Frame = +3
Query: 507 LTV*LANLDHFFALKDLGPLSYFWGIEVVPHRSGXXXXXXXXXXXXXQQAGLIKCNPISS 686
+T + +L F+++DLG YF GIE+ H G Q+A + PIS+
Sbjct: 192 ITAIIQSLSKEFSIRDLGYAHYFLGIELHSHSKGSLLSQSKYILGLLQRAKMDGARPIST 251
Query: 687 PMITLSFLSLNDNAAFSYPIKYQQVVGSLQYVTLSRPDIAFAVNKVCQYLHAPTKNHWSA 866
P+ TLS + ++ + P Y+ +VG+LQYVT++RPDI FAV++ CQ++HAPT++HW+
Sbjct: 252 PISTLS---IKNSPTMNDPSLYRSIVGALQYVTITRPDITFAVSRACQFMHAPTEDHWTG 308
Query: 867 VKQILRYLNGTIDHVMLIRRSSGSNLQAFTDVLWKGSPDTSLEDFPYADWAGDPDVRWST 1046
VK+ILRYL GTI + + R S L AF+D ADWAG P R ST
Sbjct: 309 VKRILRYLKGTILYGLQFHRHSSHTLHAFSD----------------ADWAGSPTDRRST 352
Query: 1047 GGFAIYLGINLISWTACKQHTISRSSTEAEYKHLLTS---LPNSHGFLRELRIYTSSPPI 1217
GGFAI+LG NLISW++ KQ T+SRSSTEAEYK + + L L EL + + P
Sbjct: 353 GGFAIFLGNNLISWSSKKQPTVSRSSTEAEYKAIANATAELVWLQSLLNELHLPVTGTPT 412
Query: 1218 IWCDNLGAIYLSANRSFHAHTKHVEIDFHFVREKVAQGNLRVQHI 1352
+WCDN+GA YL+AN FHA TKHVEIDFHFVRE+VA L V +I
Sbjct: 413 LWCDNIGATYLTANPVFHARTKHVEIDFHFVRERVASHQLTVSYI 457
Score = 122 bits (306), Expect(4) = e-103
Identities = 62/104 (59%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPV+K TT+R LLS+A++ N +RQLDV N+FLHG+LQETVYM+QP GF PQ P HVC
Sbjct: 67 SPVIKITTVRLLLSIAISSNWNIRQLDVSNAFLHGSLQETVYMEQPPGFTHPQYPSHVCH 126
Query: 319 FHKSIYGLKQAPRARFQRLSKALH-ELFRGSKYPSLFIYSCGST 447
KS+YGLKQAPRA F RL LH + F GSK + Y C S+
Sbjct: 127 LRKSLYGLKQAPRAWFNRLGGWLHTQDFLGSKTDTSLFYRCTSS 170
Score = 51.2 bits (121), Expect(4) = e-103
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY+LK +G I R+KAR V K + Q+PG+D+ +TFS
Sbjct: 29 KWVYKLKHRADGSIERHKARLVAKGYHQEPGLDYIDTFS 67
Score = 31.2 bits (69), Expect(4) = e-103
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 1355 THDHIAEIFTKPLPNPRFLFLRSKLQVV 1438
T D +A+IFTKPL RF L + L V+
Sbjct: 459 TKDQLADIFTKPLSRQRFQMLCTNLHVI 486
>ref|XP_020197777.1| uncharacterized protein LOC109783596 [Aegilops tauschii subsp.
tauschii]
Length = 1355
Score = 242 bits (618), Expect(4) = 9e-98
Identities = 125/276 (45%), Positives = 172/276 (62%), Gaps = 5/276 (1%)
Frame = +3
Query: 540 FALKDLGPLSYFWGIEVVPHRSGXXXXXXXXXXXXXQQAGLIKCNPISSPMITLSFLSLN 719
FA+KDLG L YF G+EV +G Q+AG++KC P ++PM ++
Sbjct: 1061 FAVKDLGHLHYFLGVEVASVSNGLVMTQKKYSLDLLQRAGMLKCKPTTTPMSATDRITAA 1120
Query: 720 DNAAFSYPI--KYQQVVGSLQYVTLSRPDIAFAVNKVCQYLHAPTKNHWSAVKQILRYLN 893
D + +Y+ +VG LQY+T++RPDI+FAVN+VCQYL AP HWSAVK+ILRY+
Sbjct: 1121 DGDLLPSAVATQYRSIVGGLQYLTITRPDISFAVNRVCQYLQAPRDTHWSAVKRILRYIR 1180
Query: 894 GTIDHVMLIRRSSGSNLQAFTDVLWKGSPDTSLEDFPYADWAGDPDVRWSTGGFAIYLGI 1073
T+ + + IR + + A++D ADWAG PD R STGG+A++ G
Sbjct: 1181 FTLSYGLHIRPNPSGVISAYSD----------------ADWAGSPDDRRSTGGYAVFFGS 1224
Query: 1074 NLISWTACKQHTISRSSTEAEYKHLLTSLPN---SHGFLRELRIYTSSPPIIWCDNLGAI 1244
LI+W+A KQ T+SRSSTEAEYK + + L+EL I S PI+WCDN+GA
Sbjct: 1225 TLIAWSARKQATVSRSSTEAEYKVVANATAEIIWIQSLLQELGISQSQSPILWCDNIGAT 1284
Query: 1245 YLSANRSFHAHTKHVEIDFHFVREKVAQGNLRVQHI 1352
YLSAN FHA TKH+E+D+HFVRE+V+Q L+++ I
Sbjct: 1285 YLSANPVFHARTKHIEVDYHFVRERVSQKQLQIKFI 1320
Score = 110 bits (274), Expect(4) = 9e-98
Identities = 59/99 (59%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK TTIR LLSLA+T LRQLDVQN+FLHG L+E VYM+QP GF DP RP ++C
Sbjct: 925 SPVVKPTTIRLLLSLAITRGWSLRQLDVQNAFLHGVLEEEVYMRQPPGFFDPDRPDYLCR 984
Query: 319 FHKSIYGLKQAPRARFQRLSKAL--HELFRGSKYPSLFI 429
K+ YGLKQAPRA RL+ AL H + SLF+
Sbjct: 985 LTKAFYGLKQAPRAWHARLATALRAHGFASSAADSSLFL 1023
Score = 48.9 bits (115), Expect(4) = 9e-98
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWV+++K+ +G I RYKAR V + F+Q+ G+D+ +TFS
Sbjct: 887 KWVFKVKKHSDGSIERYKARLVARGFRQRYGLDYEDTFS 925
Score = 30.0 bits (66), Expect(4) = 9e-98
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 1361 DHIAEIFTKPLPNPRFLFLRSKLQVV 1438
D +A+IFTKPLP P+F R L ++
Sbjct: 1324 DQLADIFTKPLPLPQFETCRRNLTLL 1349
>ref|XP_009368272.2| PREDICTED: uncharacterized protein LOC103957781 [Pyrus x
bretschneideri]
Length = 1880
Score = 223 bits (567), Expect(4) = 1e-96
Identities = 122/281 (43%), Positives = 168/281 (59%), Gaps = 3/281 (1%)
Frame = +3
Query: 519 LANLDHFFALKDLGPLSYFWGIEVVPHRSGXXXXXXXXXXXXXQQAGLIKCNPISSPMIT 698
+ L F++KDLGPL YF G+EV + ++ + PIS+P+
Sbjct: 517 IQKLRTLFSMKDLGPLHYFLGVEVSYSHNLMHLSQAKYALDLLKRTNFLDAKPISTPVCA 576
Query: 699 LSFLSLNDNAAFSYPIKYQQVVGSLQYVTLSRPDIAFAVNKVCQYLHAPTKNHWSAVKQI 878
LSL++ P Y+ VVG+LQY+T++RPD+++AVN+VCQ++HAPT HW AVK+I
Sbjct: 577 GQKLSLHEGDPHPDPYTYRSVVGALQYLTITRPDLSYAVNQVCQFMHAPTTTHWMAVKRI 636
Query: 879 LRYLNGTIDHVMLIRRSSGSNLQAFTDVLWKGSPDTSLEDFPYADWAGDPDVRWSTGGFA 1058
LRY+ T +L + S L AF+D AD+AGDPD R STGG+
Sbjct: 637 LRYVKSTYAQGLLYKPGS-MQLSAFSD----------------ADYAGDPDTRHSTGGYG 679
Query: 1059 IYLGINLISWTACKQHTISRSSTEAEYKHLLTSLPNSHGFLRELRIYTSSP---PIIWCD 1229
IYLG NLISW++ KQ T+SRSSTEAEY+ L + +LR L P P +WCD
Sbjct: 680 IYLGSNLISWSSKKQKTVSRSSTEAEYRQLAYTAAEI-SWLRSLFRDLQLPFLCPQLWCD 738
Query: 1230 NLGAIYLSANRSFHAHTKHVEIDFHFVREKVAQGNLRVQHI 1352
N+ +I L++N FH+ TKH+E+D+HFVREKV +G L V I
Sbjct: 739 NISSIALASNPVFHSRTKHLEVDYHFVREKVVRGELLVNFI 779
Score = 117 bits (292), Expect(4) = 1e-96
Identities = 63/100 (63%), Positives = 76/100 (76%), Gaps = 2/100 (2%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK +TIR +LSLAV++ P+RQLDVQN+FLHG L E VYM+QP+GFVD Q P HVC
Sbjct: 388 SPVVKHSTIRLVLSLAVSNQWPVRQLDVQNAFLHGYLAEEVYMRQPVGFVDSQYPHHVCR 447
Query: 319 FHKSIYGLKQAPRARFQRLSK-ALHELFRGSKYP-SLFIY 432
+S+YGLKQAPRA FQR S LH F+ SK SLF++
Sbjct: 448 LQRSLYGLKQAPRAWFQRFSDFLLHLGFQESKCDYSLFVF 487
Score = 53.9 bits (128), Expect(4) = 1e-96
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ NG I RYKAR V F QQ G+D+ ETFS
Sbjct: 350 KWVYKIKRHANGSIDRYKARLVANGFHQQHGVDYGETFS 388
Score = 33.9 bits (76), Expect(4) = 1e-96
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 1355 THDHIAEIFTKPLPNPRFLFLRSKLQVVPRP 1447
+ D +A+IFTK L + RF L SKL VV RP
Sbjct: 781 SQDQVADIFTKGLSSSRFKTLVSKLPVVSRP 811
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gb|ABF94109.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1247
Score = 234 bits (597), Expect(3) = 4e-96
Identities = 132/301 (43%), Positives = 179/301 (59%), Gaps = 5/301 (1%)
Frame = +3
Query: 465 ILITLSLRVTTKSLLTV*LANLDHFFALKDLGPLSYFWGIEVVPHRSGXXXXXXXXXXXX 644
I++T S + +LL +L FALKDLG L YF GIEV G
Sbjct: 936 IIVTSSRQEAVPALLR----DLQKEFALKDLGDLHYFLGIEVTKVSGGIVLTQDKYVNDL 991
Query: 645 XQQAGLIKCNPISSPMITLSFLSLNDNAAF--SYPIKYQQVVGSLQYVTLSRPDIAFAVN 818
++ + C P+S+P+ T LS+N+ + Y+ VVG+LQY+TL+RPDIAF VN
Sbjct: 992 LRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVN 1051
Query: 819 KVCQYLHAPTKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAFTDVLWKGSPDTSLED 998
KVCQ+LHAPT +HW+AVK+ILRYL + + +S + A++D
Sbjct: 1052 KVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSD------------- 1098
Query: 999 FPYADWAGDPDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEAEYKHLLTSLPN---S 1169
ADWAG D R STGGFA++LG NL+SW+A KQ T+SRSSTE+EYK L +
Sbjct: 1099 ---ADWAGSLDDRRSTGGFAVFLGDNLVSWSARKQATVSRSSTESEYKALANATAEIMWV 1155
Query: 1170 HGFLRELRIYTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFHFVREKVAQGNLRVQH 1349
L EL++ + S +WCDNLGA YLSAN FHA TKH+E+D+HFVRE+V++ L +
Sbjct: 1156 QTLLAELQVESPSMAKLWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSRKLLEIDF 1215
Query: 1350 I 1352
+
Sbjct: 1216 V 1216
Score = 118 bits (295), Expect(3) = 4e-96
Identities = 62/107 (57%), Positives = 80/107 (74%), Gaps = 2/107 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK+ TIR +LS+AV+ +RQLDVQN+FLHG L+E VYMKQP G+ D PG+VC
Sbjct: 821 SPVVKAATIRIILSIAVSKGWCMRQLDVQNAFLHGVLEEEVYMKQPPGYEDSSLPGYVCK 880
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSKY-PSLFIYSCGSTIV 453
K++YGLKQAPRA + RLSK L+++ F+GSK SLF Y+ G I+
Sbjct: 881 LDKALYGLKQAPRAWYSRLSKKLYDMGFQGSKADTSLFFYNKGDLII 927
Score = 52.4 bits (124), Expect(3) = 4e-96
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ ++G + RYKAR V K F+Q+ GID+ +TFS
Sbjct: 783 KWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFS 821
>gb|AUT19993.1| orf490 (mitochondrion) [Oryza coarctata]
Length = 490
Score = 243 bits (620), Expect(3) = 7e-96
Identities = 140/316 (44%), Positives = 185/316 (58%), Gaps = 8/316 (2%)
Frame = +3
Query: 429 LFMWKHYCTSWFILITLSLRVTTKSL---LTV*LANLDHFFALKDLGPLSYFWGIEVVPH 599
LF +K S F+LI + + S + L +L FALKDLG L YF GIEV
Sbjct: 163 LFFYKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLGALHYFLGIEVNKV 222
Query: 600 RSGXXXXXXXXXXXXXQQAGLIKCNPISSPMITLSFLSLNDNAAFSYP--IKYQQVVGSL 773
G ++ G+ C I++P+ T L + +Y+ +VG+L
Sbjct: 223 HDGIILTQEKYATDLLKRVGMHGCKEINTPLSTTDKLLAKEGEPLGAEDSTRYRSIVGAL 282
Query: 774 QYVTLSRPDIAFAVNKVCQYLHAPTKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAF 953
QY+TL+RPDIAF VNKVCQYLHAPT HW+AVK+ILRYL G++ + I +S + + AF
Sbjct: 283 QYLTLTRPDIAFPVNKVCQYLHAPTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAF 342
Query: 954 TDVLWKGSPDTSLEDFPYADWAGDPDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEA 1133
+D ADWAG PD R STGGFA++LG NLISW A KQ T+SRSSTEA
Sbjct: 343 SD----------------ADWAGCPDDRKSTGGFAVFLGANLISWNARKQATVSRSSTEA 386
Query: 1134 EYKHLLTS---LPNSHGFLRELRIYTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFH 1304
EYK L + + + L+E I +WCDN+GA YLSAN FHA TKH+E+D+H
Sbjct: 387 EYKALANATAEIISVQTLLKERGIAQPRAACLWCDNIGATYLSANPVFHARTKHIEVDYH 446
Query: 1305 FVREKVAQGNLRVQHI 1352
FVRE+V+QG L ++ +
Sbjct: 447 FVRERVSQGLLDIRFV 462
Score = 107 bits (268), Expect(3) = 7e-96
Identities = 60/104 (57%), Positives = 74/104 (71%), Gaps = 2/104 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK+ TIR +LSLAV++ LRQLDVQN+FLHG L+E VYM+QP G+ D + +VC
Sbjct: 67 SPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCK 126
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSKY-PSLFIYSCGS 444
K++YGLKQAPRA F RLS L L F+ SK SLF Y G+
Sbjct: 127 LDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGT 170
Score = 53.1 bits (126), Expect(3) = 7e-96
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ +G I RYKAR V K F+Q+ GID+ ETFS
Sbjct: 29 KWVYKIKRKADGTIDRYKARLVAKGFKQRYGIDYEETFS 67
>ref|XP_021995975.1| uncharacterized protein LOC110893163 [Helianthus annuus]
Length = 357
Score = 308 bits (790), Expect = 3e-95
Identities = 166/314 (52%), Positives = 215/314 (68%), Gaps = 6/314 (1%)
Frame = +3
Query: 429 LFMWKHYCTSWFILITLSLRVTT---KSLLTV*LANLDHFFALKDLGPLSYFWGIEVVPH 599
LF++ T ++L+ + + T SL+ + +L FA++DLG LSYF G+EVV
Sbjct: 17 LFIYSSKGTLLYMLVYVDDIILTGNNPSLIDQVIHSLGTTFAIQDLGSLSYFLGVEVVHQ 76
Query: 600 RSGXXXXXXXXXXXXXQQAGLIKCNPISSPMITLSFLSLNDNAAFSYPIKYQQVVGSLQY 779
S Q+AGL ++SP+ T + LSL D+ + P++Y+QVVG+LQY
Sbjct: 77 GSNLILSQQKYILELLQRAGLSHAKSVTSPITTTAHLSLGDSPLYENPVRYRQVVGALQY 136
Query: 780 VTLSRPDIAFAVNKVCQYLHAPTKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAFTD 959
VT+SRPDI FAVNKVCQ++H+PT+NHWSAVK+ILRYL GT + +LI+++SGS L A+TD
Sbjct: 137 VTISRPDITFAVNKVCQFMHSPTENHWSAVKRILRYLQGTFTYGLLIQQTSGSTLHAYTD 196
Query: 960 VLWKGSPDTSLEDFPYADWAGDPDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEAEY 1139
V ++SL F ADWAG PD R STGGFAIYLG NLISW+A KQ T+SRSSTEAEY
Sbjct: 197 V-----HNSSLNAFSDADWAGCPDDRRSTGGFAIYLGSNLISWSARKQRTVSRSSTEAEY 251
Query: 1140 KHL---LTSLPNSHGFLRELRIYTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFHFV 1310
K L + L L+EL++ +S P++WCDNLGA YLSAN FHA TKHVE+DFHFV
Sbjct: 252 KALADTVAELTWLEALLQELQVPMTSVPVLWCDNLGATYLSANPIFHARTKHVEVDFHFV 311
Query: 1311 REKVAQGNLRVQHI 1352
REKVA+G L VQ I
Sbjct: 312 REKVAKGKLSVQFI 325
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 231 bits (589), Expect(4) = 5e-95
Identities = 135/301 (44%), Positives = 176/301 (58%), Gaps = 5/301 (1%)
Frame = +3
Query: 465 ILITLSLRVTTKSLLTV*LANLDHFFALKDLGPLSYFWGIEVVPHRSGXXXXXXXXXXXX 644
I++ S T +LL +L FALKDLG L YF GIEV ++G
Sbjct: 1142 IIVASSSEKATAALLQ----DLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDL 1197
Query: 645 XQQAGLIKCNPISSPMITLSFLSLNDNAAFSYP--IKYQQVVGSLQYVTLSRPDIAFAVN 818
++ G+I C P ++P+ LSL++ + Y+ VVG+LQY+TL+RPDIAF+VN
Sbjct: 1198 LKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVN 1257
Query: 819 KVCQYLHAPTKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAFTDVLWKGSPDTSLED 998
KVCQ+LHAPT HW AVK+ILRYL + I +S + + F+D
Sbjct: 1258 KVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSD------------- 1304
Query: 999 FPYADWAGDPDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEAEYKHLLTSLPN---S 1169
ADWAG D R STGGFAI+LG NL+SW A KQ T+SRSSTE+EYK + +
Sbjct: 1305 ---ADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWV 1361
Query: 1170 HGFLRELRIYTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFHFVREKVAQGNLRVQH 1349
L EL I + IWCDNLGA YLSAN FHA TKH+E+D+HFVRE+V+Q L +
Sbjct: 1362 QTLLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDF 1421
Query: 1350 I 1352
+
Sbjct: 1422 V 1422
Score = 117 bits (294), Expect(4) = 5e-95
Identities = 65/103 (63%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK+ TIR +LSLAV+ LRQLDVQN+FLHG L+E VYM QP GF DP +P HVC
Sbjct: 1027 SPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCK 1086
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSK-YPSLFIYSCG 441
K++YGLKQAPRA F RLSK L +L F+GSK SLF + G
Sbjct: 1087 LDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKG 1129
Score = 51.2 bits (121), Expect(4) = 5e-95
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ +G + RYKAR V K F+Q+ GID+ +TFS
Sbjct: 989 KWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFS 1027
Score = 21.9 bits (45), Expect(4) = 5e-95
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 1355 THDHIAEIFTKPLPNPRFLFLRSKLQVV 1438
T+D +A+ FTKPL +S L +V
Sbjct: 1424 TNDQVADGFTKPLSVRLLENFKSNLNLV 1451
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 244 bits (622), Expect(4) = 5e-95
Identities = 143/314 (45%), Positives = 186/314 (59%), Gaps = 7/314 (2%)
Frame = +3
Query: 432 FMWKHYCTSWFILITLSLRVTTKS--LLTV*LANLDHFFALKDLGPLSYFWGIEVVPHRS 605
F K CT + ++ + V + S ++ L +L+ FALKDLG L YF GIEV
Sbjct: 606 FYNKGGCTIFILVYVDDIIVASSSAEVVAALLKDLEKDFALKDLGDLHYFLGIEVKKVSQ 665
Query: 606 GXXXXXXXXXXXXXQQAGLIKCNPISSPMITLSFLSLNDNAAFSY--PIKYQQVVGSLQY 779
G ++AG+ C P S+P+ T LS+ D Y+ +VG+LQY
Sbjct: 666 GLVLSQAWYASDILKRAGMSICKPASTPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQY 725
Query: 780 VTLSRPDIAFAVNKVCQYLHAPTKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAFTD 959
+TL+R D++F VNKVCQ+LH+PT HWSAVK+ILRY+ GT++ + +S + AF+D
Sbjct: 726 LTLTRSDLSFLVNKVCQFLHSPTTVHWSAVKRILRYIKGTVEFGLRFGKSDSMLISAFSD 785
Query: 960 VLWKGSPDTSLEDFPYADWAGDPDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEAEY 1139
ADWAG D R STGGFA++LG NLISW+A KQ T+SRSSTEAEY
Sbjct: 786 ----------------ADWAGCSDDRRSTGGFAVFLGPNLISWSARKQATVSRSSTEAEY 829
Query: 1140 KHL---LTSLPNSHGFLRELRIYTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFHFV 1310
K L T + L ELRI S +WCDNLGA YLSAN FHA TKH+EID+HFV
Sbjct: 830 KALANATTEVTWVRKILDELRIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIDYHFV 889
Query: 1311 REKVAQGNLRVQHI 1352
RE+VA+ L +Q I
Sbjct: 890 REQVAKKLLDIQFI 903
Score = 104 bits (259), Expect(4) = 5e-95
Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
S VVK+ TIR +LS+AV+ LRQLDVQN+FLHG L+E VYM+QP GF + +P ++C
Sbjct: 508 SLVVKAATIRLILSIAVSKGWSLRQLDVQNAFLHGYLEEEVYMRQPPGFENKGQPNYLCK 567
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSKY-PSLFIYSCGSTIV 453
K++YGLKQAPRA + RLS L EL F SK SLF Y+ G +
Sbjct: 568 LDKALYGLKQAPRAWYSRLSTKLQELGFISSKADTSLFFYNKGGCTI 614
Score = 51.2 bits (121), Expect(4) = 5e-95
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KW+Y++K+ +G I RYKAR V K F+Q+ GID+ +TFS
Sbjct: 470 KWMYKIKRKADGSIDRYKARLVAKGFKQRYGIDYEDTFS 508
Score = 22.7 bits (47), Expect(4) = 5e-95
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 1355 THDHIAEIFTKPLPNPRFLFLRSKLQV 1435
T D +A+ FTK LP P R L +
Sbjct: 905 TTDQLADGFTKSLPAPSLAQYRHNLNL 931
>ref|YP_514636.1| hypothetical protein OrsaiPp07 (mitochondrion) [Oryza sativa Indica
Group]
ref|YP_003433855.1| hypothetical protein OrrupM_p18 (mitochondrion) [Oryza rufipogon]
gb|AAZ99275.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
gb|AAZ99329.1| hypothetical protein (mitochondrion) [Oryza sativa Japonica Group]
gb|AAZ99382.1| hypothetical protein (mitochondrion) [Oryza sativa Japonica Group]
dbj|BAI67959.1| hypothetical protein (mitochondrion) [Oryza rufipogon]
dbj|BAI67987.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
gb|AER12982.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
gb|AER13050.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
gb|AEZ03755.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
gb|AEZ03764.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
dbj|BAN67511.1| hypothetical protein (mitochondrion) [Oryza rufipogon]
dbj|BAN67513.1| hypothetical protein (mitochondrion) [Oryza rufipogon]
dbj|BAV53152.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
Length = 490
Score = 240 bits (612), Expect(3) = 6e-95
Identities = 139/316 (43%), Positives = 184/316 (58%), Gaps = 8/316 (2%)
Frame = +3
Query: 429 LFMWKHYCTSWFILITLSLRVTTKSL---LTV*LANLDHFFALKDLGPLSYFWGIEVVPH 599
LF +K S F+LI + + S + L +L FALKDLG L YF GIEV
Sbjct: 163 LFFYKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLGALHYFLGIEVNKV 222
Query: 600 RSGXXXXXXXXXXXXXQQAGLIKCNPISSPMITLSFLSLNDNAAFSYP--IKYQQVVGSL 773
G ++ G+ C I++P+ T L + +Y+ +VG+L
Sbjct: 223 HDGIILTQEKYATDLLKRVGMHGCKEINTPLSTTDKLLAKEGEPLGAEDSTRYRSIVGAL 282
Query: 774 QYVTLSRPDIAFAVNKVCQYLHAPTKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAF 953
QY+TL+RPDIAF VNKVCQYLHAPT HW+AVK+ILRYL G++ + I +S + + AF
Sbjct: 283 QYLTLTRPDIAFPVNKVCQYLHAPTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAF 342
Query: 954 TDVLWKGSPDTSLEDFPYADWAGDPDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEA 1133
+D ADWAG PD R STGGFA++LG NLISW A KQ T+SRSSTEA
Sbjct: 343 SD----------------ADWAGCPDDRKSTGGFAVFLGANLISWNAWKQATVSRSSTEA 386
Query: 1134 EYKHLLTS---LPNSHGFLRELRIYTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFH 1304
EYK L + + + L+E I +WCDN+GA LSAN FHA TKH+E+D+H
Sbjct: 387 EYKALANATAEIISVQTLLKERGIAQPRAACLWCDNIGATSLSANPVFHARTKHIEVDYH 446
Query: 1305 FVREKVAQGNLRVQHI 1352
FVRE+V+QG L ++ +
Sbjct: 447 FVRERVSQGLLDIRFV 462
Score = 107 bits (268), Expect(3) = 6e-95
Identities = 60/104 (57%), Positives = 74/104 (71%), Gaps = 2/104 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK+ TIR +LSLAV++ LRQLDVQN+FLHG L+E VYM+QP G+ D + +VC
Sbjct: 67 SPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCK 126
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSKY-PSLFIYSCGS 444
K++YGLKQAPRA F RLS L L F+ SK SLF Y G+
Sbjct: 127 LDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGT 170
Score = 53.1 bits (126), Expect(3) = 6e-95
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ +G I RYKAR V K F+Q+ GID+ ETFS
Sbjct: 29 KWVYKIKRKADGTIDRYKARLVAKGFKQRYGIDYEETFS 67
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 238 bits (608), Expect(3) = 3e-94
Identities = 130/292 (44%), Positives = 179/292 (61%), Gaps = 5/292 (1%)
Frame = +3
Query: 492 TTKSLLTV*LANLDHFFALKDLGPLSYFWGIEVVPHRSGXXXXXXXXXXXXXQQAGLIKC 671
+T+ T L +L+ FALKDLG L YF GIEV +G ++ + C
Sbjct: 1139 STEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNC 1198
Query: 672 NPISSPMITLSFLSLNDNAAF--SYPIKYQQVVGSLQYVTLSRPDIAFAVNKVCQYLHAP 845
P+S+P+ L+L + + + I+Y+ +VG+LQY+TL+RPDIA++VNKVCQ+LHAP
Sbjct: 1199 KPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAP 1258
Query: 846 TKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAFTDVLWKGSPDTSLEDFPYADWAGD 1025
T +HW AVK+ILRYLN + I +S+ + + ++D ADWAG
Sbjct: 1259 TTSHWIAVKRILRYLNQCTSLGLHIHKSASTLVHGYSD----------------ADWAGS 1302
Query: 1026 PDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEAEYKHLLTSLPN---SHGFLRELRI 1196
D R STGGFA++LG NL+SW+A KQ T+SRSSTEAEYK + + L+EL I
Sbjct: 1303 IDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGI 1362
Query: 1197 YTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFHFVREKVAQGNLRVQHI 1352
+ IWCDNLGA YLSAN FHA TKH+E+D+HFVRE+V+Q L + +
Sbjct: 1363 ESPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFV 1414
Score = 108 bits (271), Expect(3) = 3e-94
Identities = 60/107 (56%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK+ TIR +LS+AV+ LRQLDVQN+FLHG L+E VYM+QP GF +P +VC
Sbjct: 1019 SPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVCK 1078
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSKY-PSLFIYSCGSTIV 453
K++YGLKQAPRA + RLSK L EL F SK SLF + G ++
Sbjct: 1079 LDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILM 1125
Score = 51.2 bits (121), Expect(3) = 3e-94
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ +G + RYKAR V K F+Q+ GID+ +TFS
Sbjct: 981 KWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFS 1019
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 238 bits (608), Expect(3) = 3e-94
Identities = 130/292 (44%), Positives = 179/292 (61%), Gaps = 5/292 (1%)
Frame = +3
Query: 492 TTKSLLTV*LANLDHFFALKDLGPLSYFWGIEVVPHRSGXXXXXXXXXXXXXQQAGLIKC 671
+T+ T L +L+ FALKDLG L YF GIEV +G ++ + C
Sbjct: 1130 STEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNC 1189
Query: 672 NPISSPMITLSFLSLNDNAAF--SYPIKYQQVVGSLQYVTLSRPDIAFAVNKVCQYLHAP 845
P+S+P+ L+L + + + +Y+ +VG+LQY+TL+RPDIA++VNKVCQ+LHAP
Sbjct: 1190 KPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAP 1249
Query: 846 TKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAFTDVLWKGSPDTSLEDFPYADWAGD 1025
T +HW+AVK+ILRYLN + I +S+ + + ++D ADWAG
Sbjct: 1250 TTDHWTAVKRILRYLNQCTSLGLNIHKSASTLVHGYSD----------------ADWAGS 1293
Query: 1026 PDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEAEYKHLLTSLPN---SHGFLRELRI 1196
D R STGGFA++LG NL+SW+A KQ T+SRSSTEAEYK + + LREL I
Sbjct: 1294 VDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLRELGI 1353
Query: 1197 YTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFHFVREKVAQGNLRVQHI 1352
+ IWCDNLGA YLSAN FHA TKH+E+D+HFVRE+V+Q L + +
Sbjct: 1354 DSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFV 1405
Score = 108 bits (271), Expect(3) = 3e-94
Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK+ TIR +LS+AV+ LRQLDVQN+FLHG L+E VYM+QP GF +P +VC
Sbjct: 1010 SPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESFSKPNYVCK 1069
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSKY-PSLFIYSCGSTIV 453
K++YGLKQAPRA + RLSK L EL F SK SLF + G I+
Sbjct: 1070 LDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIM 1116
Score = 51.2 bits (121), Expect(3) = 3e-94
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ +G + RYKAR V K F+Q+ GID+ +TFS
Sbjct: 972 KWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFS 1010
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 236 bits (602), Expect(3) = 4e-94
Identities = 131/283 (46%), Positives = 173/283 (61%), Gaps = 5/283 (1%)
Frame = +3
Query: 519 LANLDHFFALKDLGPLSYFWGIEVVPHRSGXXXXXXXXXXXXXQQAGLIKCNPISSPMIT 698
L +L+ FALKDLG L YF GIEV ++ + C P+S+P+ T
Sbjct: 595 LKDLEKDFALKDLGDLHYFLGIEVKRTPQTLLLSQERYTTELLERVNMTSCKPVSTPLST 654
Query: 699 LSFLS--LNDNAAFSYPIKYQQVVGSLQYVTLSRPDIAFAVNKVCQYLHAPTKNHWSAVK 872
LS + D S +Y+ +VG+LQY+TL+RPDI+++VNKVCQ+L PT HWSAVK
Sbjct: 655 AEKLSVEIGDELGPSDVTQYRSIVGALQYLTLTRPDISYSVNKVCQFLQTPTTAHWSAVK 714
Query: 873 QILRYLNGTIDHVMLIRRSSGSNLQAFTDVLWKGSPDTSLEDFPYADWAGDPDVRWSTGG 1052
+ILRYL GT+D + I +SS + + AF+D W GS D +AD R STGG
Sbjct: 715 RILRYLKGTLDLGLKIVKSSSNLVSAFSDADWAGSVDDRRSTGGFAD-------RRSTGG 767
Query: 1053 FAIYLGINLISWTACKQHTISRSSTEAEYKHLLTSLPN---SHGFLRELRIYTSSPPIIW 1223
FA++ G NLISW+A KQ T+SRSSTEAEYK L + L EL I + +W
Sbjct: 768 FAVFFGDNLISWSARKQATVSRSSTEAEYKALANAAAEIIWVRKLLTELGILHPNAARLW 827
Query: 1224 CDNLGAIYLSANRSFHAHTKHVEIDFHFVREKVAQGNLRVQHI 1352
CDNLGA Y++AN FHA TKH+E+D+HFVRE+VAQ L + +
Sbjct: 828 CDNLGATYMTANPVFHARTKHIEVDYHFVREQVAQKLLDIHFV 870
Score = 110 bits (274), Expect(3) = 4e-94
Identities = 60/103 (58%), Positives = 74/103 (71%), Gaps = 2/103 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK+ TIR +LS+A++ LRQLDVQN+FLHG L E VYM+QP GF D ++P +C
Sbjct: 466 SPVVKAATIRLVLSIAMSQGWSLRQLDVQNAFLHGYLDEEVYMRQPPGFEDARQPHFLCK 525
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSKY-PSLFIYSCG 441
K++YGLKQAPRA + RLSK L EL F SK SLF Y+ G
Sbjct: 526 LDKALYGLKQAPRAWYSRLSKKLQELGFSSSKADTSLFFYNKG 568
Score = 52.0 bits (123), Expect(3) = 4e-94
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ +G I RYKAR V K F+Q+ GID+ +TFS
Sbjct: 428 KWVYKIKKKADGTIDRYKARLVAKGFKQRYGIDYEDTFS 466
>ref|YP_002000554.1| orf490 (mitochondrion) [Oryza sativa Japonica Group]
dbj|BAC19858.1| orf490 (mitochondrion) [Oryza sativa Japonica Group]
Length = 490
Score = 240 bits (612), Expect(3) = 5e-94
Identities = 139/316 (43%), Positives = 184/316 (58%), Gaps = 8/316 (2%)
Frame = +3
Query: 429 LFMWKHYCTSWFILITLSLRVTTKSL---LTV*LANLDHFFALKDLGPLSYFWGIEVVPH 599
LF +K S F+LI + + S + L +L FALKDLG L YF GIEV
Sbjct: 163 LFFYKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLGALHYFLGIEVNKV 222
Query: 600 RSGXXXXXXXXXXXXXQQAGLIKCNPISSPMITLSFLSLNDNAAFSYP--IKYQQVVGSL 773
G ++ G+ C I++P+ T L + +Y+ +VG+L
Sbjct: 223 HDGIILTQEKYATDLLKRVGMHGCKEINTPLSTTDKLLAKEGEPLGAEDSTRYRSIVGAL 282
Query: 774 QYVTLSRPDIAFAVNKVCQYLHAPTKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAF 953
QY+TL+RPDIAF VNKVCQYLHAPT HW+AVK+ILRYL G++ + I +S + + AF
Sbjct: 283 QYLTLTRPDIAFPVNKVCQYLHAPTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAF 342
Query: 954 TDVLWKGSPDTSLEDFPYADWAGDPDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEA 1133
+D ADWAG PD R STGGFA++LG NLISW A KQ T+SRSSTEA
Sbjct: 343 SD----------------ADWAGCPDDRKSTGGFAVFLGANLISWNAWKQATVSRSSTEA 386
Query: 1134 EYKHLLTS---LPNSHGFLRELRIYTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFH 1304
EYK L + + + L+E I +WCDN+GA LSAN FHA TKH+E+D+H
Sbjct: 387 EYKALANATAEIISVQTLLKERGIAQPRAACLWCDNIGATSLSANPVFHARTKHIEVDYH 446
Query: 1305 FVREKVAQGNLRVQHI 1352
FVRE+V+QG L ++ +
Sbjct: 447 FVRERVSQGLLDIRFV 462
Score = 104 bits (260), Expect(3) = 5e-94
Identities = 58/104 (55%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK+ TIR +LSLAV++ LRQLDVQN+FLHG L+E VYM+QP G+ D + +VC
Sbjct: 67 SPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCK 126
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSKY-PSLFIYSCGS 444
K++YGL+ APRA F RLS L L F+ SK SLF Y G+
Sbjct: 127 LDKALYGLRHAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGT 170
Score = 53.1 bits (126), Expect(3) = 5e-94
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ +G I RYKAR V K F+Q+ GID+ ETFS
Sbjct: 29 KWVYKIKRKADGTIDRYKARLVAKGFKQRYGIDYEETFS 67
>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1621
Score = 228 bits (581), Expect(3) = 6e-94
Identities = 133/291 (45%), Positives = 171/291 (58%), Gaps = 5/291 (1%)
Frame = +3
Query: 465 ILITLSLRVTTKSLLTV*LANLDHFFALKDLGPLSYFWGIEVVPHRSGXXXXXXXXXXXX 644
I++ S T +LL NL FALKDLG L YF GIEV ++G
Sbjct: 864 IIVASSSEKATAALLQ----NLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDL 919
Query: 645 XQQAGLIKCNPISSPMITLSFLSLNDNAAFSYP--IKYQQVVGSLQYVTLSRPDIAFAVN 818
++ G+I C P ++P+ LSL++ + Y+ VVG+LQY+TL+RPDIAF+VN
Sbjct: 920 LKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVN 979
Query: 819 KVCQYLHAPTKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAFTDVLWKGSPDTSLED 998
KVCQ+LHAPT HW AVK+ILRYL + I +S + + F+D
Sbjct: 980 KVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSD------------- 1026
Query: 999 FPYADWAGDPDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEAEYKHLLTSLPN---S 1169
ADWAG D R STGGFAI+LG NL+SW A KQ T+SRSSTE+EYK + +
Sbjct: 1027 ---ADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWV 1083
Query: 1170 HGFLRELRIYTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFHFVREKV 1322
L EL I + IWCDNLGA YLSAN FHA TKH+E+D+HFVRE++
Sbjct: 1084 QTLLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERL 1134
Score = 118 bits (295), Expect(3) = 6e-94
Identities = 65/103 (63%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK+ TIR +LSLAV+ LRQLDVQN+FLHG L+E VYM QP GF DP +P HVC
Sbjct: 749 SPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCK 808
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSKY-PSLFIYSCG 441
K++YGLKQAPRA F RLSK L +L F+GSK SLF + G
Sbjct: 809 LDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKG 851
Score = 51.2 bits (121), Expect(3) = 6e-94
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ +G + RYKAR V K F+Q+ GID+ +TFS
Sbjct: 711 KWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFS 749
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 242 bits (617), Expect(3) = 8e-94
Identities = 134/301 (44%), Positives = 187/301 (62%), Gaps = 5/301 (1%)
Frame = +3
Query: 465 ILITLSLRVTTKSLLTV*LANLDHFFALKDLGPLSYFWGIEVVPHRSGXXXXXXXXXXXX 644
I++ S T++LL+ +L+ FALKDLG L+YF GIEV R G
Sbjct: 1002 IIVASSTHKATEALLS----DLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDL 1057
Query: 645 XQQAGLIKCNPISSPMITLSFLSLNDNAAFSYP--IKYQQVVGSLQYVTLSRPDIAFAVN 818
++ G+ C PIS+P+ T LS+++ + +Y+ +VG+LQY+TL+RPDIAF+VN
Sbjct: 1058 LKKVGMSDCKPISTPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVN 1117
Query: 819 KVCQYLHAPTKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAFTDVLWKGSPDTSLED 998
KVCQ+LHAPT HW+AVK+ILRY+ + + I RS + + AF+D
Sbjct: 1118 KVCQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDSTLVSAFSD------------- 1164
Query: 999 FPYADWAGDPDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEAEYKHLLTSLPN---S 1169
ADWAG D R STGGFA++LG NL+SW+A KQ T+SRSSTE+EYK L +
Sbjct: 1165 ---ADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTESEYKALANATAELIWV 1221
Query: 1170 HGFLRELRIYTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFHFVREKVAQGNLRVQH 1349
L E+ I + +WCDNLGA YLSAN FHA TKH+E+D+HFVR++VA+ L +++
Sbjct: 1222 QILLTEISIKSPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDYHFVRDRVAKKLLDIEY 1281
Query: 1350 I 1352
+
Sbjct: 1282 V 1282
Score = 103 bits (257), Expect(3) = 8e-94
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK TIR +LS+AV+ L QLDVQN+FLHG L+E VYM+QP G+ D + +VC
Sbjct: 887 SPVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCK 946
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSKY-PSLFIYSCGSTIV 453
K++YGLKQAPRA + RLS L L F+ SK SLF Y+ GS +
Sbjct: 947 LDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTI 993
Score = 51.6 bits (122), Expect(3) = 8e-94
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ +G + RYKAR V K ++QQ GID+ +TFS
Sbjct: 849 KWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFS 887
>ref|YP_009241997.1| hypothetical protein (mitochondrion) [Oryza minuta]
gb|AMA06715.1| hypothetical protein (mitochondrion) [Oryza minuta]
Length = 490
Score = 236 bits (602), Expect(3) = 8e-94
Identities = 137/316 (43%), Positives = 182/316 (57%), Gaps = 8/316 (2%)
Frame = +3
Query: 429 LFMWKHYCTSWFILITLSLRVTTKSL---LTV*LANLDHFFALKDLGPLSYFWGIEVVPH 599
LF +K S F+LI + + S + L +L FALKDLG L YF GIEV
Sbjct: 163 LFFYKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLGALHYFLGIEVNKV 222
Query: 600 RSGXXXXXXXXXXXXXQQAGLIKCNPISSPMITLSFLSLNDNAAFSYP--IKYQQVVGSL 773
G ++ G+ C I++P+ T + +Y+ +VG+L
Sbjct: 223 HDGIILTQEKYATDLLKRVGMHGCKEINTPLSTTDKFLAKEGEPLGAEDSTRYRSIVGAL 282
Query: 774 QYVTLSRPDIAFAVNKVCQYLHAPTKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAF 953
QY+TL+RPDIAF VNKVCQYLHAPT HW+AVK+ILRYL G++ + I +S + + AF
Sbjct: 283 QYLTLTRPDIAFPVNKVCQYLHAPTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAF 342
Query: 954 TDVLWKGSPDTSLEDFPYADWAGDPDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEA 1133
+D ADWAG PD R TGGFA++LG NLISW A KQ T+SRSSTEA
Sbjct: 343 SD----------------ADWAGCPDDRKPTGGFAVFLGANLISWNARKQATVSRSSTEA 386
Query: 1134 EYKHLLTS---LPNSHGFLRELRIYTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFH 1304
EYK L + + + L+E I +WCDN+GA LSAN FHA TKH+E+D+H
Sbjct: 387 EYKALANATAEIISVQTLLKERGIAQPRAACLWCDNIGATSLSANPVFHARTKHIEVDYH 446
Query: 1305 FVREKVAQGNLRVQHI 1352
FVRE+V+QG L ++ +
Sbjct: 447 FVRERVSQGLLDIRFV 462
Score = 107 bits (268), Expect(3) = 8e-94
Identities = 60/104 (57%), Positives = 74/104 (71%), Gaps = 2/104 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK+ TIR +LSLAV++ LRQLDVQN+FLHG L+E VYM+QP G+ D + +VC
Sbjct: 67 SPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCK 126
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSKY-PSLFIYSCGS 444
K++YGLKQAPRA F RLS L L F+ SK SLF Y G+
Sbjct: 127 LDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGT 170
Score = 53.1 bits (126), Expect(3) = 8e-94
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ +G I RYKAR V K F+Q+ GID+ ETFS
Sbjct: 29 KWVYKIKRKADGTIDRYKARLVAKGFKQRYGIDYEETFS 67
>ref|XP_021319227.1| uncharacterized protein LOC110436454 [Sorghum bicolor]
Length = 1035
Score = 243 bits (619), Expect(3) = 2e-93
Identities = 142/316 (44%), Positives = 185/316 (58%), Gaps = 8/316 (2%)
Frame = +3
Query: 429 LFMWKHYCTSWFILI---TLSLRVTTKSLLTV*LANLDHFFALKDLGPLSYFWGIEVVPH 599
LF + H S F+L+ + + ++ L +L FALKDLG L YF GIEV
Sbjct: 705 LFFYNHGGFSMFVLVYVVDIIVASSSSQATEALLRDLQRDFALKDLGDLHYFLGIEVNRV 764
Query: 600 RSGXXXXXXXXXXXXXQQAGLIKCNPISSPMITLSFLSLN--DNAAFSYPIKYQQVVGSL 773
G ++G+ + + +P+ + LSLN D +Y+ VVG+L
Sbjct: 765 SDGLVLSQERYAANVLSRSGMDRAKAVDTPLSSTEKLSLNIGDPLGPDDSTRYRSVVGAL 824
Query: 774 QYVTLSRPDIAFAVNKVCQYLHAPTKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAF 953
QY+TL+RPDI+FAVNKVCQYLHAPT HWS VK+ILRY++GT+ + IRRS + + AF
Sbjct: 825 QYLTLTRPDISFAVNKVCQYLHAPTIVHWSTVKRILRYISGTVKMGLKIRRSGSTLVSAF 884
Query: 954 TDVLWKGSPDTSLEDFPYADWAGDPDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEA 1133
+D ADWAG D R STGGF +++G N++SW A KQ T+SRSSTEA
Sbjct: 885 SD----------------ADWAGCVDDRRSTGGFVVFVGANIVSWMARKQATVSRSSTEA 928
Query: 1134 EYKHLLTSLPNS---HGFLRELRIYTSSPPIIWCDNLGAIYLSANRSFHAHTKHVEIDFH 1304
EYK L + L ELRI S +WCDNLGA YLSAN FHA TK++EIDFH
Sbjct: 929 EYKALANATAEMMWVQKLLAELRIQHPSSARLWCDNLGAKYLSANPVFHARTKYIEIDFH 988
Query: 1305 FVREKVAQGNLRVQHI 1352
FVRE+VA L ++ I
Sbjct: 989 FVRERVANKLLDIRFI 1004
Score = 98.2 bits (243), Expect(3) = 2e-93
Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
S VVK+ TIR +L +AV+ LRQLDVQN+FLHG L+E VYM+QP G+VD +VC
Sbjct: 609 SLVVKAATIRLILYIAVSKGWSLRQLDVQNAFLHGLLEEEVYMQQPPGYVDSVHSAYVCK 668
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSK-YPSLFIYSCG 441
K++YGLKQAPRA + RL + L L F SK SLF Y+ G
Sbjct: 669 LDKALYGLKQAPRAWYARLCQRLESLGFVASKANTSLFFYNHG 711
Score = 54.7 bits (130), Expect(3) = 2e-93
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ +G I RYKAR V K F+QQ GID+ ETFS
Sbjct: 571 KWVYKIKRKADGTIDRYKARLVAKGFKQQYGIDYEETFS 609
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gb|AAU44069.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1447
Score = 224 bits (572), Expect(3) = 3e-93
Identities = 134/308 (43%), Positives = 180/308 (58%), Gaps = 11/308 (3%)
Frame = +3
Query: 462 FILITLSLRVTTKS---LLTV*LANLDHFFALKDLGPLSYFWGIEVVPHRSGXXXXXXXX 632
F+LI + + T S ++ L +L FALKDLG L YF GIEV
Sbjct: 1128 FVLIYVDDIIVTSSRQEAVSALLQDLKKEFALKDLGDLHYFLGIEVNKVTDEIILTQDKY 1187
Query: 633 XXXXXQQAGLIKCNPISSPMITLSFLSLNDNAAFSYPI---KYQQVVGSLQYVTLSRPDI 803
++ + C P+S+P+ T LS ++ P+ Y+ VVG+LQY+TL+RPDI
Sbjct: 1188 ACDLLRRVNMFDCKPVSTPLSTSEKLSAHEGDLLG-PLDATNYRSVVGALQYLTLTRPDI 1246
Query: 804 AFAVNKVCQYLHAPTKNHWSAVKQILRYLNGTIDHVMLIRRSSGSNLQAFTDVLWKGSPD 983
AF VNKVCQ+LHAPT HW+AVK+ILRYL + + +S + A++D
Sbjct: 1247 AFPVNKVCQFLHAPTTVHWAAVKRILRYLKQCTKLGLKLCKSKSMLVSAYSD-------- 1298
Query: 984 TSLEDFPYADWAGDPDVRWSTGGFAIYLGINLISWTACKQHTISRSSTEAEYKHLLTSLP 1163
ADWAG D R STGGFA++LG NL+SW A KQ T+SRSSTE+EYK L +
Sbjct: 1299 --------ADWAGSLDDRRSTGGFAVFLGDNLVSWCARKQATVSRSSTESEYKALANATA 1350
Query: 1164 N---SHGFLRELRIYTSSPPI--IWCDNLGAIYLSANRSFHAHTKHVEIDFHFVREKVAQ 1328
L EL++ SPP+ +WCDNLGA YLS+N FHA TKH+E+D+HFVRE+V+Q
Sbjct: 1351 EIMWVQTLLTELQV--QSPPMAKLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERVSQ 1408
Query: 1329 GNLRVQHI 1352
L + +
Sbjct: 1409 KLLEIDFV 1416
Score = 118 bits (295), Expect(3) = 3e-93
Identities = 63/107 (58%), Positives = 80/107 (74%), Gaps = 2/107 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK+ TIR +LS+AV+ +RQLDVQN+FLHG L+E VYMKQP G+ D PG+VC
Sbjct: 1021 SPVVKAATIRIVLSIAVSRGWCMRQLDVQNAFLHGFLEEEVYMKQPPGYEDESFPGYVCK 1080
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSK-YPSLFIYSCGSTIV 453
K++YGLKQAPRA + RLSK L++L F+GSK SLF Y+ G I+
Sbjct: 1081 LDKALYGLKQAPRAWYSRLSKKLYDLGFQGSKGDTSLFFYNKGGLII 1127
Score = 52.4 bits (124), Expect(3) = 3e-93
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ ++G + RYKAR V K F+Q+ GID+ +TFS
Sbjct: 983 KWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFS 1021
>ref|XP_022032011.1| uncharacterized protein LOC110933078 [Helianthus annuus]
Length = 321
Score = 302 bits (773), Expect = 3e-93
Identities = 160/282 (56%), Positives = 195/282 (69%), Gaps = 6/282 (2%)
Frame = +3
Query: 525 NLDHFFALKDLGPLSYFWGIEV---VPHRSGXXXXXXXXXXXXXQQAGLIKCNPISSPMI 695
+L FAL+D+GPLSYF GIEV + SG +AGL + P+ SP
Sbjct: 24 SLSSTFALQDMGPLSYFLGIEVDVLKSNGSGVILSQKKYILEILTKAGLSQSKPVPSPCS 83
Query: 696 TLSFLSLNDNAAFSYPIKYQQVVGSLQYVTLSRPDIAFAVNKVCQYLHAPTKNHWSAVKQ 875
T + L+L D+ +F P++Y+QVVG+LQY+TL+RPDIAFAVNKVCQ++HAPT+NHWSAVK+
Sbjct: 84 TTAPLTLGDSPSFDNPVRYRQVVGALQYLTLTRPDIAFAVNKVCQFMHAPTENHWSAVKR 143
Query: 876 ILRYLNGTIDHVMLIRRSSGSNLQAFTDVLWKGSPDTSLEDFPYADWAGDPDVRWSTGGF 1055
ILRYL+GTIDH +L +R+SGS L A+TD ADWAG PD R STGGF
Sbjct: 144 ILRYLHGTIDHGLLFKRASGSTLHAYTD----------------ADWAGCPDDRRSTGGF 187
Query: 1056 AIYLGINLISWTACKQHTISRSSTEAEYKHL---LTSLPNSHGFLRELRIYTSSPPIIWC 1226
AIYLG NL+SW+A KQ T+SRSSTE+EYK L + L L+ELR+ PI+WC
Sbjct: 188 AIYLGSNLVSWSARKQRTVSRSSTESEYKALADTVAELTWLESLLQELRVPVKLAPILWC 247
Query: 1227 DNLGAIYLSANRSFHAHTKHVEIDFHFVREKVAQGNLRVQHI 1352
DNLGA YLSAN FHA KHVE+DFHFVREKVAQG L VQ I
Sbjct: 248 DNLGATYLSANPVFHARMKHVEVDFHFVREKVAQGRLSVQFI 289
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 224 bits (572), Expect(3) = 6e-93
Identities = 128/278 (46%), Positives = 164/278 (58%), Gaps = 5/278 (1%)
Frame = +3
Query: 519 LANLDHFFALKDLGPLSYFWGIEVVPHRSGXXXXXXXXXXXXXQQAGLIKCNPISSPMIT 698
L +L FALKDLG L YF GIEV ++G ++ G+I C P ++P+
Sbjct: 1149 LQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLSV 1208
Query: 699 LSFLSLNDNAAFSYP--IKYQQVVGSLQYVTLSRPDIAFAVNKVCQYLHAPTKNHWSAVK 872
LSL++ + Y+ VVG+LQY+TL+RPDIAF+VNKVCQ+LHAPT HW AVK
Sbjct: 1209 SEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVK 1268
Query: 873 QILRYLNGTIDHVMLIRRSSGSNLQAFTDVLWKGSPDTSLEDFPYADWAGDPDVRWSTGG 1052
+ILRYL + I +S + + F+D ADWAG D R STGG
Sbjct: 1269 RILRYLKQCTRLGLEIHKSGSTLVSGFSD----------------ADWAGCLDDRRSTGG 1312
Query: 1053 FAIYLGINLISWTACKQHTISRSSTEAEYKHLLTSLPN---SHGFLRELRIYTSSPPIIW 1223
FAI+LG NL+SW A KQ T+SRSS E+EYK + + L EL I + IW
Sbjct: 1313 FAIFLGSNLVSWNARKQATVSRSSIESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIW 1372
Query: 1224 CDNLGAIYLSANRSFHAHTKHVEIDFHFVREKVAQGNL 1337
CDNLGA YLSAN FHA TKH+E+D+HFVRE+ G +
Sbjct: 1373 CDNLGAKYLSANPVFHARTKHIEVDYHFVREREGLGTM 1410
Score = 118 bits (295), Expect(3) = 6e-93
Identities = 65/103 (63%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Frame = +1
Query: 139 SPVVKSTTIRALLSLAVTHNCPLRQLDVQNSFLHGNLQETVYMKQPLGFVDPQRPGHVCL 318
SPVVK+ TIR +LSLAV+ LRQLDVQN+FLHG L+E VYM QP GF DP +P HVC
Sbjct: 1020 SPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCK 1079
Query: 319 FHKSIYGLKQAPRARFQRLSKALHEL-FRGSKY-PSLFIYSCG 441
K++YGLKQAPRA F RLSK L +L F+GSK SLF + G
Sbjct: 1080 LDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKG 1122
Score = 51.2 bits (121), Expect(3) = 6e-93
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 21 KWVYRLKQDKNGEITRYKARFVVKRFQQQPGIDFHETFS 137
KWVY++K+ +G + RYKAR V K F+Q+ GID+ +TFS
Sbjct: 982 KWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFS 1020