BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00001599
         (941 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021989525.1| ATP-dependent Clp protease proteolytic subun...   368   e-125
ref|XP_021989526.1| ATP-dependent Clp protease proteolytic subun...   367   e-125
ref|XP_023744807.1| ATP-dependent Clp protease proteolytic subun...   343   e-115
gb|PON86632.1| ATP-dependent Clp protease proteolytic subunit [T...   305   e-100
ref|XP_017613223.1| PREDICTED: ATP-dependent Clp protease proteo...   305   e-100
ref|XP_017613224.1| PREDICTED: ATP-dependent Clp protease proteo...   304   e-100
gb|PON52591.1| ATP-dependent Clp protease proteolytic subunit [P...   304   e-100
gb|KVH93232.1| ClpP [Cynara cardunculus var. scolymus]                303   e-100
dbj|GAV73729.1| CLP_protease domain-containing protein [Cephalot...   303   1e-99
ref|XP_017227011.1| PREDICTED: ATP-dependent Clp protease proteo...   303   1e-99
ref|XP_017613222.1| PREDICTED: ATP-dependent Clp protease proteo...   303   2e-99
ref|XP_012460595.1| PREDICTED: ATP-dependent Clp protease proteo...   301   4e-99
ref|XP_012480092.1| PREDICTED: ATP-dependent Clp protease proteo...   301   5e-99
ref|XP_016679795.1| PREDICTED: ATP-dependent Clp protease proteo...   301   6e-99
gb|KJB77565.1| hypothetical protein B456_012G145900 [Gossypium r...   301   6e-99
ref|XP_016734530.1| PREDICTED: ATP-dependent Clp protease proteo...   301   7e-99
ref|XP_016733437.1| PREDICTED: ATP-dependent Clp protease proteo...   300   1e-98
gb|OMO63443.1| ClpP [Corchorus olitorius]                             300   2e-98
ref|XP_012460593.1| PREDICTED: ATP-dependent Clp protease proteo...   300   2e-98
ref|XP_016679794.1| PREDICTED: ATP-dependent Clp protease proteo...   300   3e-98

>ref|XP_021989525.1| ATP-dependent Clp protease proteolytic subunit 6, chloroplastic
           isoform X1 [Helianthus annuus]
 gb|OTG12217.1| putative CLP protease proteolytic subunit 6 [Helianthus annuus]
          Length = 268

 Score =  368 bits (944), Expect = e-125
 Identities = 194/269 (72%), Positives = 205/269 (76%), Gaps = 18/269 (6%)
 Frame = +1

Query: 58  MAASTLSTSSFILTNHKQSQRSSKLKPIVCAALPTPYTDASKTGLSSNAQKLEITPEEMN 237
           MAAS +S S    T     +RSSKLK  VCA LP+PY+D++K GLSSNAQKL++TPEEMN
Sbjct: 1   MAASAISPSFTFSTVSPHQRRSSKLKSTVCA-LPSPYSDSAKLGLSSNAQKLQLTPEEMN 59

Query: 238 LYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX---------------- 369
           L+          VARRGAPPPIMPAVMTPGGPLDLST                       
Sbjct: 60  LHAPLNSSYNPIVARRGAPPPIMPAVMTPGGPLDLSTVLFRNRIIFVGQPINSQVAQRVI 119

Query: 370 --LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXX 543
             LVTLATIDENADIL+YVNCPGGSTYSVLAIYDCMSWIKPKVGTVCF            
Sbjct: 120 SQLVTLATIDENADILVYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASEGALLLA 179

Query: 544 XXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQPLEKV 723
             EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMY+AFTGQPLEKV
Sbjct: 180 GGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYSAFTGQPLEKV 239

Query: 724 QQYTERDRFLSVSEALEFGLIDGILETEY 810
           QQYTERDRFLSVSEALEFGLIDGILETEY
Sbjct: 240 QQYTERDRFLSVSEALEFGLIDGILETEY 268


>ref|XP_021989526.1| ATP-dependent Clp protease proteolytic subunit 6, chloroplastic
           isoform X2 [Helianthus annuus]
          Length = 267

 Score =  367 bits (943), Expect = e-125
 Identities = 195/269 (72%), Positives = 206/269 (76%), Gaps = 18/269 (6%)
 Frame = +1

Query: 58  MAASTLSTSSFILTNHKQSQRSSKLKPIVCAALPTPYTDASKTGLSSNAQKLEITPEEMN 237
           MAAS +S S F  +     QRSSKLK  VCA LP+PY+D++K GLSSNAQKL++TPEEMN
Sbjct: 1   MAASAISPS-FTFSTVSPHQRSSKLKSTVCA-LPSPYSDSAKLGLSSNAQKLQLTPEEMN 58

Query: 238 LYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX---------------- 369
           L+          VARRGAPPPIMPAVMTPGGPLDLST                       
Sbjct: 59  LHAPLNSSYNPIVARRGAPPPIMPAVMTPGGPLDLSTVLFRNRIIFVGQPINSQVAQRVI 118

Query: 370 --LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXX 543
             LVTLATIDENADIL+YVNCPGGSTYSVLAIYDCMSWIKPKVGTVCF            
Sbjct: 119 SQLVTLATIDENADILVYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASEGALLLA 178

Query: 544 XXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQPLEKV 723
             EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMY+AFTGQPLEKV
Sbjct: 179 GGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYSAFTGQPLEKV 238

Query: 724 QQYTERDRFLSVSEALEFGLIDGILETEY 810
           QQYTERDRFLSVSEALEFGLIDGILETEY
Sbjct: 239 QQYTERDRFLSVSEALEFGLIDGILETEY 267


>ref|XP_023744807.1| ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like [Lactuca sativa]
 gb|PLY65457.1| hypothetical protein LSAT_5X117920 [Lactuca sativa]
          Length = 270

 Score =  343 bits (879), Expect = e-115
 Identities = 188/272 (69%), Positives = 201/272 (73%), Gaps = 21/272 (7%)
 Frame = +1

Query: 58  MAASTLSTS---SFILTNHKQSQRSSKLKPIVCAALPTPYTDASKTGLSSNAQKLEITPE 228
           M+AS +STS   S +  +   SQR+SK K IVC  LP+PY+D SK GLSS AQKL +TPE
Sbjct: 1   MSASAISTSFTFSKVSRHELFSQRNSKRKSIVCT-LPSPYSDTSKIGLSSKAQKLHLTPE 59

Query: 229 EMNLYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX------------- 369
           EM+ +          VARRGAPP IMPAVMTPGGPLDLST                    
Sbjct: 60  EMHPHTLHNSSYNPIVARRGAPP-IMPAVMTPGGPLDLSTVLFRNRIIFVGQPINSQVAQ 118

Query: 370 -----LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXX 534
                LVTLATID+ ADIL+YVNCPGGSTYSVLAIYDCMSWIKPKVGTV F         
Sbjct: 119 RVISQLVTLATIDDKADILVYVNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASEGAL 178

Query: 535 XXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQPL 714
                EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKIDMMYAAFTGQPL
Sbjct: 179 LLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDMMYAAFTGQPL 238

Query: 715 EKVQQYTERDRFLSVSEALEFGLIDGILETEY 810
           EKVQQYTERDRFLSVSEALEFGLIDGILETEY
Sbjct: 239 EKVQQYTERDRFLSVSEALEFGLIDGILETEY 270


>gb|PON86632.1| ATP-dependent Clp protease proteolytic subunit [Trema orientalis]
          Length = 277

 Score =  305 bits (781), Expect = e-100
 Identities = 168/267 (62%), Positives = 180/267 (67%), Gaps = 18/267 (6%)
 Frame = +1

Query: 64  ASTLSTSSFILTNHKQSQRSSKLKPIVCAALPTPYTDASKTGLSSNAQKLEITPEEMNLY 243
           AS   T S  L++   S R  K K  + + L +PY D S TGLSS      +T +E   Y
Sbjct: 15  ASHYKTPSLPLSSSLSSSR--KPKSSILSTLSSPYGDFSSTGLSSKTSGSPLTLDEK--Y 70

Query: 244 XXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX------------------ 369
                     +  R   PPIMPAVMTPGGPLDLST                         
Sbjct: 71  FHDASTSYGAIQARKGNPPIMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQVAQRVISQ 130

Query: 370 LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXX 549
           LVTLATIDENADILIY+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF              
Sbjct: 131 LVTLATIDENADILIYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGG 190

Query: 550 EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQPLEKVQQ 729
           EKGMRYAMPN RIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFTGQPLEKVQQ
Sbjct: 191 EKGMRYAMPNTRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPLEKVQQ 250

Query: 730 YTERDRFLSVSEALEFGLIDGILETEY 810
           YTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 251 YTERDRFLSVSEAMEFGLIDGVLETEY 277


>ref|XP_017613223.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like isoform X2 [Gossypium arboreum]
          Length = 283

 Score =  305 bits (781), Expect = e-100
 Identities = 168/272 (61%), Positives = 187/272 (68%), Gaps = 18/272 (6%)
 Frame = +1

Query: 49  NQTMAASTLSTSSFILTNHKQSQRSSKLKPIVCAALPTPYTDASKTGLSSNAQKLEITPE 228
           ++T   S  S SS  +T  + +  SS    +V +ALPTPY D+S  GLSS    L +  +
Sbjct: 16  SRTRPTSISSPSSRYIT--RPTSISSPSSRLVISALPTPYGDSSTMGLSSKVSGLPLKID 73

Query: 229 EMNLYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX------------- 369
           +   +           AR+G PP +MPAVMTPGGPLDLST                    
Sbjct: 74  KKG-FGDSDLSYSAIEARKGNPP-VMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQVAQ 131

Query: 370 -----LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXX 534
                LVTLA IDENADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF         
Sbjct: 132 RVITQLVTLAAIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL 191

Query: 535 XXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQPL 714
                EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFTGQPL
Sbjct: 192 LLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPL 251

Query: 715 EKVQQYTERDRFLSVSEALEFGLIDGILETEY 810
           EKVQQYTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 252 EKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 283


>ref|XP_017613224.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like isoform X3 [Gossypium arboreum]
          Length = 273

 Score =  304 bits (779), Expect = e-100
 Identities = 169/276 (61%), Positives = 191/276 (69%), Gaps = 25/276 (9%)
 Frame = +1

Query: 58  MAASTLSTSSFILTNHKQSQRSSKLKP-------IVCAALPTPYTDASKTGLSSNAQKLE 216
           M AS +S+SS  L+ + +++ +S   P       +V +ALPTPY D+S  GLSS    L 
Sbjct: 1   MVASAVSSSSS-LSLYSRTRPTSISSPSSRSSTRLVISALPTPYGDSSTMGLSSKVSGLP 59

Query: 217 ITPEEMNLYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX--------- 369
           +  ++   +           AR+G PP +MPAVMTPGGPLDLST                
Sbjct: 60  LKIDKKG-FGDSDLSYSAIEARKGNPP-VMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNS 117

Query: 370 ---------LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXX 522
                    LVTLA IDENADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF     
Sbjct: 118 QVAQRVITQLVTLAAIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAAS 177

Query: 523 XXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFT 702
                    EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFT
Sbjct: 178 QGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFT 237

Query: 703 GQPLEKVQQYTERDRFLSVSEALEFGLIDGILETEY 810
           GQPLEKVQQYTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 238 GQPLEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273


>gb|PON52591.1| ATP-dependent Clp protease proteolytic subunit [Parasponia
           andersonii]
          Length = 277

 Score =  304 bits (779), Expect = e-100
 Identities = 168/267 (62%), Positives = 180/267 (67%), Gaps = 18/267 (6%)
 Frame = +1

Query: 64  ASTLSTSSFILTNHKQSQRSSKLKPIVCAALPTPYTDASKTGLSSNAQKLEITPEEMNLY 243
           AS   TSS  L++   S R  K K  + + L +PY D SKTGLS        T +E   Y
Sbjct: 15  ASHYKTSSLPLSSSLSSSR--KPKSSILSTLSSPYGDFSKTGLSGKTSGSPPTLDEK--Y 70

Query: 244 XXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX------------------ 369
                     +  R   PPIMPAVMTPGGPLDLST                         
Sbjct: 71  FHDASTSYGAIQARKGNPPIMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQVAQRVISQ 130

Query: 370 LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXX 549
           LVTLATIDENADILIY+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF              
Sbjct: 131 LVTLATIDENADILIYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGG 190

Query: 550 EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQPLEKVQQ 729
           EKGMRYAMPN RIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFTGQPL+KVQQ
Sbjct: 191 EKGMRYAMPNTRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPLDKVQQ 250

Query: 730 YTERDRFLSVSEALEFGLIDGILETEY 810
           YTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 251 YTERDRFLSVSEAMEFGLIDGVLETEY 277


>gb|KVH93232.1| ClpP [Cynara cardunculus var. scolymus]
          Length = 260

 Score =  303 bits (776), Expect = e-100
 Identities = 173/277 (62%), Positives = 187/277 (67%), Gaps = 26/277 (9%)
 Frame = +1

Query: 58  MAASTLSTSSFI--LTNHKQS------QRSSKLKPIVCAALPTPYTDASKTGLSSNAQKL 213
           MAAS +STS     L  HK+S      QRSSK K IVCA LPTPY+D SK GLSS+ Q+L
Sbjct: 1   MAASAISTSFTFSNLPRHKESSISLSSQRSSKAKSIVCA-LPTPYSDLSKIGLSSSTQEL 59

Query: 214 EITPEEMNLYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX-------- 369
           ++T  E N +          +ARRG PP +MPAV+TPGGPLDLST               
Sbjct: 60  QLTTAEKNSHAPHNSSYNPVLARRGNPP-VMPAVITPGGPLDLSTVLFRNRIIFVGQPIN 118

Query: 370 ----------LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXX 519
                     LVTLATIDENADIL+YVNCPGGSTYSVLAIYDCMSWIKPKVGTVCF    
Sbjct: 119 SQVAQRVISQLVTLATIDENADILVYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA 178

Query: 520 XXXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAF 699
                     EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKIDMMY+AF
Sbjct: 179 SEGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDMMYSAF 238

Query: 700 TGQPLEKVQQYTERDRFLSVSEALEFGLIDGILETEY 810
           TGQPLEK               ALEFGLIDGILETEY
Sbjct: 239 TGQPLEK---------------ALEFGLIDGILETEY 260


>dbj|GAV73729.1| CLP_protease domain-containing protein [Cephalotus follicularis]
          Length = 270

 Score =  303 bits (776), Expect = 1e-99
 Identities = 164/263 (62%), Positives = 181/263 (68%), Gaps = 18/263 (6%)
 Frame = +1

Query: 76  STSSFILTNHKQSQRSSKLKPIVCAALPTPYTDASKTGLSSNAQKLEITPEEMNLYXXXX 255
           +TSSF     + S RS      + +ALP+PY  +S  GLSS    L +  +E NL     
Sbjct: 16  TTSSFSSLTCRNSTRS------IVSALPSPYGASSIIGLSSGISGLSLKLDEKNL--RDT 67

Query: 256 XXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX------------------LVTL 381
                 +  +   PPIMPAVMTPGGPLDLS+                         LVTL
Sbjct: 68  NPSNGAIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTL 127

Query: 382 ATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGM 561
           ATIDENADIL+YVNCPGGSTYSVLAIYDCMSWIKPKVGTVCF              EKGM
Sbjct: 128 ATIDENADILVYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGM 187

Query: 562 RYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQPLEKVQQYTER 741
           RYAMPNARIMIHQPQSGCGGHVEDVRRQVNEA+Q+RHK+D MYAAFTGQPLEKVQQYTER
Sbjct: 188 RYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAIQSRHKVDKMYAAFTGQPLEKVQQYTER 247

Query: 742 DRFLSVSEALEFGLIDGILETEY 810
           DRFLSVSEA+EFGLIDG+LETEY
Sbjct: 248 DRFLSVSEAMEFGLIDGVLETEY 270


>ref|XP_017227011.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic [Daucus carota subsp. sativus]
 gb|KZM81381.1| hypothetical protein DCAR_028994 [Daucus carota subsp. sativus]
          Length = 271

 Score =  303 bits (776), Expect = 1e-99
 Identities = 162/269 (60%), Positives = 187/269 (69%), Gaps = 19/269 (7%)
 Frame = +1

Query: 61  AASTLSTSSFILTNHKQSQRSS-KLKPIVCAALPTPYTDASKTGLSSNAQKLEITPEEMN 237
           +A + S S  + ++H  S  S   LK  + +AL TPY D+S+TGLSS +  L +  +E  
Sbjct: 4   SAISASLSFSVSSSHNPSSLSQWSLKKPIISALSTPYGDSSRTGLSSRSHGLRLKVDEKE 63

Query: 238 LYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX---------------- 369
                        A++G PP +MPAV+TPGGPLDLST                       
Sbjct: 64  SLAVASPSYGPIEAKKGNPP-VMPAVLTPGGPLDLSTVLFRNRIIFIGQPINAQVAQRVI 122

Query: 370 --LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXX 543
             LVTLATIDENADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF            
Sbjct: 123 SQLVTLATIDENADILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLA 182

Query: 544 XXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQPLEKV 723
             EKGMRY+MPN+RIMIHQPQSGCGGHVEDVRRQVNEAVQ R+K+D M+AAFTGQPLEKV
Sbjct: 183 GGEKGMRYSMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQTRYKVDNMFAAFTGQPLEKV 242

Query: 724 QQYTERDRFLSVSEALEFGLIDGILETEY 810
           QQYTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 243 QQYTERDRFLSVSEAMEFGLIDGVLETEY 271


>ref|XP_017613222.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like isoform X1 [Gossypium arboreum]
          Length = 287

 Score =  303 bits (776), Expect = 2e-99
 Identities = 168/274 (61%), Positives = 185/274 (67%), Gaps = 20/274 (7%)
 Frame = +1

Query: 49  NQTMAASTLSTSSFILTNHKQ--SQRSSKLKPIVCAALPTPYTDASKTGLSSNAQKLEIT 222
           ++T   S  S SS  +T      S  S     +V +ALPTPY D+S  GLSS    L + 
Sbjct: 16  SRTRPTSISSPSSRYITRPTSISSPSSRSSTRLVISALPTPYGDSSTMGLSSKVSGLPLK 75

Query: 223 PEEMNLYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX----------- 369
            ++   +           AR+G PP +MPAVMTPGGPLDLST                  
Sbjct: 76  IDKKG-FGDSDLSYSAIEARKGNPP-VMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQV 133

Query: 370 -------LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXX 528
                  LVTLA IDENADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF       
Sbjct: 134 AQRVITQLVTLAAIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 193

Query: 529 XXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQ 708
                  EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFTGQ
Sbjct: 194 ALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQ 253

Query: 709 PLEKVQQYTERDRFLSVSEALEFGLIDGILETEY 810
           PLEKVQQYTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 254 PLEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 287


>ref|XP_012460595.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like isoform X4 [Gossypium raimondii]
 gb|KJB77569.1| hypothetical protein B456_012G145900 [Gossypium raimondii]
          Length = 269

 Score =  301 bits (772), Expect = 4e-99
 Identities = 166/272 (61%), Positives = 189/272 (69%), Gaps = 21/272 (7%)
 Frame = +1

Query: 58  MAASTLSTSSFILTNHKQSQRSSKLKP---IVCAALPTPYTDASKTGLSSNAQKLEITPE 228
           M AS +S SS  L+ + +++ +S   P   ++ +ALPTPY D+S  GLSS    L +  +
Sbjct: 1   MVASAVS-SSLSLSLYSRTRPTSISSPSSRLIISALPTPYGDSSTMGLSSRVSGLPLKID 59

Query: 229 EMNLYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX------------- 369
           +   +           A++G PP +MPAVMTPGGPLDLST                    
Sbjct: 60  KKG-FGDSDLSYGAIEAKKGNPP-VMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQVAQ 117

Query: 370 -----LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXX 534
                LVTLA IDENADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF         
Sbjct: 118 RVITQLVTLAAIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL 177

Query: 535 XXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQPL 714
                EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFT QPL
Sbjct: 178 LLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTSQPL 237

Query: 715 EKVQQYTERDRFLSVSEALEFGLIDGILETEY 810
           EKVQQYTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 238 EKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 269


>ref|XP_012480092.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like [Gossypium raimondii]
 gb|KJB32183.1| hypothetical protein B456_005G228000 [Gossypium raimondii]
          Length = 273

 Score =  301 bits (772), Expect = 5e-99
 Identities = 165/275 (60%), Positives = 184/275 (66%), Gaps = 24/275 (8%)
 Frame = +1

Query: 58  MAASTLSTS-SFILTNHKQSQRSSKLKP-----IVCAALPTPYTDASKTGLSSNAQKLEI 219
           M AS +S S +  L    +    S L P     ++ +ALP+PY D+S  GLSS    L +
Sbjct: 1   MVASPISASFNLSLCTQTRPTSISSLSPRNSTKLIVSALPSPYGDSSTMGLSSRTAGLPM 60

Query: 220 TPEEMNLYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX---------- 369
              +  L           +  +   PP+MPAVMTPGGPLDLST                 
Sbjct: 61  KINKKGLLESNPSYDA--IQAKTGNPPVMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQ 118

Query: 370 --------LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXX 525
                   LVTLAT+DENADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF      
Sbjct: 119 VAQRVISQLVTLATVDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQ 178

Query: 526 XXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTG 705
                   EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFTG
Sbjct: 179 GALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTG 238

Query: 706 QPLEKVQQYTERDRFLSVSEALEFGLIDGILETEY 810
           QPLEKVQQYTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 239 QPLEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273


>ref|XP_016679795.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like isoform X2 [Gossypium hirsutum]
          Length = 269

 Score =  301 bits (771), Expect = 6e-99
 Identities = 166/272 (61%), Positives = 189/272 (69%), Gaps = 21/272 (7%)
 Frame = +1

Query: 58  MAASTLSTSSFILTNHKQSQRSSKLKP---IVCAALPTPYTDASKTGLSSNAQKLEITPE 228
           M AS +S SS  L+ + +++ +S   P   ++ +ALPTPY D+S  GLSS    L +  +
Sbjct: 1   MVASAVS-SSLSLSLYSRTRPTSISPPSSRLIISALPTPYGDSSAMGLSSRVSGLPLKID 59

Query: 229 EMNLYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX------------- 369
           +   +           A++G PP +MPAVMTPGGPLDLST                    
Sbjct: 60  KKG-FGDSDLSYGAIEAKKGNPP-VMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQVAQ 117

Query: 370 -----LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXX 534
                LVTLA IDENADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF         
Sbjct: 118 RVITQLVTLAAIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL 177

Query: 535 XXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQPL 714
                EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFT QPL
Sbjct: 178 LLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTSQPL 237

Query: 715 EKVQQYTERDRFLSVSEALEFGLIDGILETEY 810
           EKVQQYTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 238 EKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 269


>gb|KJB77565.1| hypothetical protein B456_012G145900 [Gossypium raimondii]
          Length = 272

 Score =  301 bits (771), Expect = 6e-99
 Identities = 165/268 (61%), Positives = 184/268 (68%), Gaps = 19/268 (7%)
 Frame = +1

Query: 64  ASTLSTSSFILTNHKQ-SQRSSKLKPIVCAALPTPYTDASKTGLSSNAQKLEITPEEMNL 240
           +S+LS S +  T     S  SS    ++ +ALPTPY D+S  GLSS    L +  ++   
Sbjct: 7   SSSLSLSLYSRTRPTSISSPSSSSTRLIISALPTPYGDSSTMGLSSRVSGLPLKIDKKG- 65

Query: 241 YXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX----------------- 369
           +           A++G PP +MPAVMTPGGPLDLST                        
Sbjct: 66  FGDSDLSYGAIEAKKGNPP-VMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQVAQRVIT 124

Query: 370 -LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXX 546
            LVTLA IDENADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF             
Sbjct: 125 QLVTLAAIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAG 184

Query: 547 XEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQPLEKVQ 726
            EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFT QPLEKVQ
Sbjct: 185 GEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTSQPLEKVQ 244

Query: 727 QYTERDRFLSVSEALEFGLIDGILETEY 810
           QYTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 245 QYTERDRFLSVSEAMEFGLIDGVLETEY 272


>ref|XP_016734530.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like isoform X3 [Gossypium hirsutum]
          Length = 273

 Score =  301 bits (771), Expect = 7e-99
 Identities = 167/276 (60%), Positives = 190/276 (68%), Gaps = 25/276 (9%)
 Frame = +1

Query: 58  MAASTLSTSSFILTNHKQSQRSSKLKP-------IVCAALPTPYTDASKTGLSSNAQKLE 216
           M AS +S SS  L+ + +++ +S   P       ++ +ALPTPY D+S  GLSS    L 
Sbjct: 1   MVASAVS-SSLSLSLYSRTRPTSISSPSSRSSTRLIISALPTPYGDSSTMGLSSKVSGLP 59

Query: 217 ITPEEMNLYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX--------- 369
           +  ++   +           AR+G PP +MPAVMTPGGPLDLST                
Sbjct: 60  LKIDKKG-FGDSDLSYSAIEARKGNPP-VMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNS 117

Query: 370 ---------LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXX 522
                    LVTLA IDENADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF     
Sbjct: 118 QVAQRVITQLVTLAAIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAAS 177

Query: 523 XXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFT 702
                    EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+R+KID MYAAFT
Sbjct: 178 QGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRYKIDKMYAAFT 237

Query: 703 GQPLEKVQQYTERDRFLSVSEALEFGLIDGILETEY 810
           GQPLEKVQQYTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 238 GQPLEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273


>ref|XP_016733437.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like [Gossypium hirsutum]
 gb|PPD71385.1| hypothetical protein GOBAR_DD31711 [Gossypium barbadense]
          Length = 273

 Score =  300 bits (769), Expect = 1e-98
 Identities = 164/275 (59%), Positives = 183/275 (66%), Gaps = 24/275 (8%)
 Frame = +1

Query: 58  MAASTLSTS-SFILTNHKQSQRSSKLKP-----IVCAALPTPYTDASKTGLSSNAQKLEI 219
           M AS +S S +  L    +    S L P     ++ +ALP+PY D+S  GLSS    L +
Sbjct: 1   MVASAISASFNLSLCTQSRPTSISSLSPRNSTKLIVSALPSPYGDSSTMGLSSRTAGLPM 60

Query: 220 TPEEMNLYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX---------- 369
              +  L           +  +   PP+MPAVMTPGGPLDLST                 
Sbjct: 61  KINKKGLLESNPSYDA--IQAKTGNPPVMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQ 118

Query: 370 --------LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXX 525
                   LVTLAT+DENADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF      
Sbjct: 119 VAQRVISQLVTLATVDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQ 178

Query: 526 XXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTG 705
                   EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFTG
Sbjct: 179 GALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTG 238

Query: 706 QPLEKVQQYTERDRFLSVSEALEFGLIDGILETEY 810
           QPLEKVQQYTERDRFL VSEA+EFGLIDG+LETEY
Sbjct: 239 QPLEKVQQYTERDRFLCVSEAMEFGLIDGVLETEY 273


>gb|OMO63443.1| ClpP [Corchorus olitorius]
          Length = 273

 Score =  300 bits (768), Expect = 2e-98
 Identities = 165/268 (61%), Positives = 183/268 (68%), Gaps = 18/268 (6%)
 Frame = +1

Query: 61  AASTLSTSSFILTNHKQSQRSSKLKPIVCAALPTPYTDASKTGLSSNAQKLEITPEEMNL 240
           A+ +LS  S I  N   S  S     ++ +ALP+PY D+S  GLSS    L +  +E  L
Sbjct: 8   ASLSLSLPSRIKPNSISSLSSRNSTRLIASALPSPYGDSSGMGLSSRISGLPLKIDEKTL 67

Query: 241 YXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX----------------- 369
           +           AR+G PP +MPAVMTPGGPLDLST                        
Sbjct: 68  HDSNLSYEPIE-ARKGNPP-VMPAVMTPGGPLDLSTVLLRNRIIFIGQPINSQVAQRVIS 125

Query: 370 -LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXX 546
            LVTLATIDE+ADIL+YVN PGGSTYSV AIYDCMSWIKPKVGTVCF             
Sbjct: 126 QLVTLATIDEDADILVYVNSPGGSTYSVFAIYDCMSWIKPKVGTVCFGVAASQAALLLAG 185

Query: 547 XEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFTGQPLEKVQ 726
            EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFTGQPLEKVQ
Sbjct: 186 GEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPLEKVQ 245

Query: 727 QYTERDRFLSVSEALEFGLIDGILETEY 810
           QYTERDRFLS SEA++FGLIDG+LETEY
Sbjct: 246 QYTERDRFLSPSEAMDFGLIDGVLETEY 273


>ref|XP_012460593.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like isoform X3 [Gossypium raimondii]
 gb|KJB77566.1| hypothetical protein B456_012G145900 [Gossypium raimondii]
          Length = 273

 Score =  300 bits (768), Expect = 2e-98
 Identities = 166/276 (60%), Positives = 189/276 (68%), Gaps = 25/276 (9%)
 Frame = +1

Query: 58  MAASTLSTSSFILTNHKQSQRSSKLKP-------IVCAALPTPYTDASKTGLSSNAQKLE 216
           M AS +S SS  L+ + +++ +S   P       ++ +ALPTPY D+S  GLSS    L 
Sbjct: 1   MVASAVS-SSLSLSLYSRTRPTSISSPSSRSSTRLIISALPTPYGDSSTMGLSSRVSGLP 59

Query: 217 ITPEEMNLYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX--------- 369
           +  ++   +           A++G PP +MPAVMTPGGPLDLST                
Sbjct: 60  LKIDKKG-FGDSDLSYGAIEAKKGNPP-VMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNS 117

Query: 370 ---------LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXX 522
                    LVTLA IDENADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF     
Sbjct: 118 QVAQRVITQLVTLAAIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAAS 177

Query: 523 XXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFT 702
                    EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFT
Sbjct: 178 QGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFT 237

Query: 703 GQPLEKVQQYTERDRFLSVSEALEFGLIDGILETEY 810
            QPLEKVQQYTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 238 SQPLEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273


>ref|XP_016679794.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like isoform X1 [Gossypium hirsutum]
          Length = 273

 Score =  300 bits (767), Expect = 3e-98
 Identities = 166/276 (60%), Positives = 189/276 (68%), Gaps = 25/276 (9%)
 Frame = +1

Query: 58  MAASTLSTSSFILTNHKQSQRSSKLKP-------IVCAALPTPYTDASKTGLSSNAQKLE 216
           M AS +S SS  L+ + +++ +S   P       ++ +ALPTPY D+S  GLSS    L 
Sbjct: 1   MVASAVS-SSLSLSLYSRTRPTSISPPSSRSSTRLIISALPTPYGDSSAMGLSSRVSGLP 59

Query: 217 ITPEEMNLYXXXXXXXXXXVARRGAPPPIMPAVMTPGGPLDLSTXXXXXXX--------- 369
           +  ++   +           A++G PP +MPAVMTPGGPLDLST                
Sbjct: 60  LKIDKKG-FGDSDLSYGAIEAKKGNPP-VMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNS 117

Query: 370 ---------LVTLATIDENADILIYVNCPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXX 522
                    LVTLA IDENADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVCF     
Sbjct: 118 QVAQRVITQLVTLAAIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAAS 177

Query: 523 XXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQNRHKIDMMYAAFT 702
                    EKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKID MYAAFT
Sbjct: 178 QGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFT 237

Query: 703 GQPLEKVQQYTERDRFLSVSEALEFGLIDGILETEY 810
            QPLEKVQQYTERDRFLSVSEA+EFGLIDG+LETEY
Sbjct: 238 SQPLEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273