BLASTX nr result

ID: Chrysanthemum22_contig00001330 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00001330
         (448 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI05225.1| hypothetical protein Ccrd_016452 [Cynara carduncu...    79   4e-14

>gb|KVI05225.1| hypothetical protein Ccrd_016452 [Cynara cardunculus var. scolymus]
          Length = 487

 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 66/149 (44%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
 Frame = +1

Query: 1   PRTKVNELQRQHVGMKQTA--PSSVRPVLPN-HLKHEVPSSLYNKTEVLPVPSQSRQNDV 171
           P TK N+LQ      K +   PSS RP+LP+  LKHE+PSS+ NKT + PVPS+S ++DV
Sbjct: 256 PETKNNDLQGLRFSRKPSPSLPSSGRPILPSSQLKHEIPSSVLNKTGI-PVPSRSSKSDV 314

Query: 172 KLGQFSRQQQPIPSQGRPAVSQSRLELEM-SRPSLDVQTGPSVSRRIDVQGPRYGR-QQV 345
            +   SR QQPIPS GR    Q  L+ E+   P+L V   PS      +QG   GR +Q 
Sbjct: 315 DVPHPSR-QQPIPSHGRSVPPQIHLKHELPPNPTLSVPP-PS------LQGFHSGRDEQS 366

Query: 346 APSSGTQVLP---RSHLEREIPRPSMNVQ 423
            PSSG  V P   RS  E  +P  S   Q
Sbjct: 367 TPSSGMSVRPTGKRSISEITVPVNSSKEQ 395


Top