BLASTX nr result

ID: Chrysanthemum22_contig00001184 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00001184
         (969 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPR93174.1| hypothetical protein GOBAR_AA27497 [Gossypium bar...    54   5e-06
gb|ACJ85451.1| unknown [Medicago truncatula]                           57   7e-06
ref|XP_010060738.1| PREDICTED: protein transport protein Sec61 s...    57   7e-06
emb|CDY43687.1| BnaA04g20040D, partial [Brassica napus]                59   7e-06
gb|KMT02322.1| hypothetical protein BVRB_9g205470 [Beta vulgaris...    55   8e-06

>gb|PPR93174.1| hypothetical protein GOBAR_AA27497 [Gossypium barbadense]
          Length = 77

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 25/33 (75%), Positives = 26/33 (78%)
 Frame = -3

Query: 205 LPLYGINSPTGAIPFSWMRAILGSNRGNAMELG 107
           LPLYGI+S TGA PF WMR IL SNRG  MELG
Sbjct: 6   LPLYGIHSTTGADPFYWMRVILASNRGTVMELG 38


>gb|ACJ85451.1| unknown [Medicago truncatula]
          Length = 188

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 238 LNLYPTIIFVHLPLYGINSPTGAIPFSWMRAILGSNRGNAMELG 107
           ++L+  ++   LPLYGI+S TGA PF WMR IL SNRG  MELG
Sbjct: 39  ISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELG 82


>ref|XP_010060738.1| PREDICTED: protein transport protein Sec61 subunit alpha
           [Eucalyptus grandis]
 gb|KCW67566.1| hypothetical protein EUGRSUZ_F01316 [Eucalyptus grandis]
          Length = 191

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 238 LNLYPTIIFVHLPLYGINSPTGAIPFSWMRAILGSNRGNAMELG 107
           ++L+  ++   LPLYGI+S TGA PF WMR IL SNRG  MELG
Sbjct: 39  ISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELG 82


>emb|CDY43687.1| BnaA04g20040D, partial [Brassica napus]
          Length = 452

 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 32/56 (57%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
 Frame = -3

Query: 256 PYRHFCLN---LYPTIIFV---HLPLYGINSPTGAIPFSWMRAILGSNRGNAMELG 107
           P    CLN     P +IF+    LPLYGI+S TGA PF WMR IL SNRG  MELG
Sbjct: 4   PMSQHCLNREEALPFLIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELG 59


>gb|KMT02322.1| hypothetical protein BVRB_9g205470 [Beta vulgaris subsp. vulgaris]
          Length = 115

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 9/68 (13%)
 Frame = -3

Query: 283 LFFIPTLSD-----PYR----HFCLNLYPTIIFVHLPLYGINSPTGAIPFSWMRAILGSN 131
           L F+P +       P+R    +  ++L+  ++   LPLYGI+S TGA PF WMR IL S+
Sbjct: 15  LSFVPEVQSADRKVPFREKVIYTVISLFIFLVCSKLPLYGIHSTTGADPFYWMRVILASS 74

Query: 130 RGNAMELG 107
           RG  MELG
Sbjct: 75  RGTVMELG 82


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