BLASTX nr result

ID: Chrysanthemum22_contig00000819 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00000819
         (682 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021984310.1| protein TSS [Helianthus annuus] >gi|12288558...    65   2e-09
gb|KVI06069.1| Tetratricopeptide-like helical [Cynara cardunculu...    54   7e-07

>ref|XP_021984310.1| protein TSS [Helianthus annuus]
 ref|XP_021984311.1| protein TSS [Helianthus annuus]
 gb|OTG16744.1| putative tetratricopeptide repeat (TPR)-like superfamily protein
            [Helianthus annuus]
          Length = 1649

 Score = 65.1 bits (157), Expect(2) = 2e-09
 Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
 Frame = +2

Query: 5    ELATNA*NDETMIHDTDETTVPKEEPTIKEDKVIPEVVVQKVEK---VDFTTEREPLIIE 175
            EL T+A NDE M++D  ET V K E T+KED  + EVVVQKV K      TT++E ++ E
Sbjct: 1149 ELPTDARNDEMMVNDPVETVVTKAESTVKEDVTVQEVVVQKVMKGHNSHNTTKQEKIVTE 1208

Query: 176  EVQETIS 196
            EVQETIS
Sbjct: 1209 EVQETIS 1215



 Score = 25.4 bits (54), Expect(2) = 2e-09
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 199  EGCQKSNPKVRSGNNVQK 252
            EG Q++NPKVRSG    K
Sbjct: 1217 EGWQEANPKVRSGTGGPK 1234


>gb|KVI06069.1| Tetratricopeptide-like helical [Cynara cardunculus var. scolymus]
          Length = 1447

 Score = 53.9 bits (128), Expect(2) = 7e-07
 Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = +2

Query: 5    ELATNA*NDETMIHDTDETTVPKEEPTIKEDKVIPEVVVQKVEKVDFTTEREPLIIEE-V 181
            E+ T+  ND+T+IHDT ETTV K E TI ED  I +V+V+KV+  +   + +  I EE V
Sbjct: 939  EVQTDTRNDDTVIHDTMETTVAKAESTIHED--ISDVIVEKVKGGNNIIKNDSFITEEIV 996

Query: 182  QETIS 196
            QETIS
Sbjct: 997  QETIS 1001



 Score = 27.7 bits (60), Expect(2) = 7e-07
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1

Query: 199  EGCQKSNPKVRSGNNVQK 252
            EG Q++NPKVRSGN   K
Sbjct: 1003 EGWQEANPKVRSGNGGPK 1020


Top