BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00000762
         (1875 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP48666.1| Retrovirus-related Pol polyprotein from transposo...   268   2e-81
gb|KYP54918.1| Retrovirus-related Pol polyprotein from transposo...   270   4e-80
gb|PKI51032.1| hypothetical protein CRG98_028581 [Punica granatum]    266   4e-80
ref|XP_021652040.1| uncharacterized protein LOC110643835 [Hevea ...   284   5e-80
ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794...   284   6e-80
gb|PNX84630.1| retrovirus-related Pol polyprotein from transposo...   271   2e-79
ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...   274   2e-79
gb|PRQ38882.1| putative RNA-directed DNA polymerase [Rosa chinen...   283   2e-78
ref|XP_024196177.1| uncharacterized protein LOC112199378 [Rosa c...   283   2e-78
ref|XP_020423926.1| uncharacterized protein LOC109950224 [Prunus...   265   3e-78
gb|PNY00469.1| retrovirus-related Pol polyprotein from transposo...   273   4e-78
gb|KYP61041.1| Retrovirus-related Pol polyprotein from transposo...   273   7e-78
gb|KYP37906.1| Retrovirus-related Pol polyprotein from transposo...   277   1e-77
gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposo...   275   2e-77
gb|PRQ55089.1| putative RNA-directed DNA polymerase [Rosa chinen...   278   2e-77
gb|OMO49485.1| Reverse transcriptase, RNA-dependent DNA polymera...   264   3e-77
gb|PNX84823.1| retrovirus-related Pol polyprotein from transposo...   261   5e-77
gb|OTG09173.1| putative reverse transcriptase, RNA-dependent DNA...   273   8e-77
gb|OTG03795.1| putative ribonuclease H-like domain-containing pr...   274   1e-76
gb|PKI78362.1| hypothetical protein CRG98_001305 [Punica granatum]    265   2e-76

>gb|KYP48666.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 312

 Score =  268 bits (686), Expect = 2e-81
 Identities = 139/266 (52%), Positives = 186/266 (69%), Gaps = 2/266 (0%)
 Frame = -1

Query: 792 RQSTRLKSIPSKLSGFHYTLPKSFT--NSILSKHHHSNFINYRNLSQSNLHFINTVTSIS 619
           R+STR K  P+ L  +H  L ++    +S   ++  S+ ++Y +L+   L F  ++T+  
Sbjct: 20  RRSTRHKQAPTYLIDYHCNLLQNIEIHDSKNIRYSLSSVLSYHSLNPEFLKFSLSITTEI 79

Query: 618 EPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNANGSIE 439
           EP +Y QA++ P W +AM +E+ AL+ N TW  T LP GK  IGSKWVY+IK N++G+++
Sbjct: 80  EPKNYQQAAQSPHWIKAMQEELGALKMNKTWCLTPLPIGKFVIGSKWVYKIKYNSDGTLQ 139

Query: 438 RYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAFLHGDL 259
           RYKARLVAKGYNQ EG+D+ +TFAPVAK+  VR LL++A   NW++ QLDINNAFLHGDL
Sbjct: 140 RYKARLVAKGYNQTEGLDYFDTFAPVAKLTIVRLLLALASTKNWFLHQLDINNAFLHGDL 199

Query: 258 HEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSYVDTSL 79
            EEVYM VPQG S +     VCKL KS+YGLKQA+RQWF KL+TFL  LG+KQS  D SL
Sbjct: 200 TEEVYMKVPQGLSVS-DSTMVCKLQKSIYGLKQASRQWFAKLSTFLFNLGYKQSCYDHSL 258

Query: 78  LTIKYNGTITSLLVYVDDILLVSKDA 1
              K+N     +LVYV+D++L   DA
Sbjct: 259 FIKKFNSKCIIILVYVNDLILAGDDA 284


>gb|KYP54918.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 471

 Score =  270 bits (691), Expect = 4e-80
 Identities = 142/266 (53%), Positives = 176/266 (66%), Gaps = 3/266 (1%)
 Frame = -1

Query: 792 RQSTRLKSIPSKLSGFHYTLPKSFTNSILSK---HHHSNFINYRNLSQSNLHFINTVTSI 622
           R+S R+   P+ L  FH     S     LSK   H  S+ INY  LS S+LH++ ++++ 
Sbjct: 24  RRSQRIPFSPTYLKDFHCNFLTSSPQ--LSKGISHPLSSVINYNTLSSSHLHYVLSLSTH 81

Query: 621 SEPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNANGSI 442
            EP  Y QA K   W  AM  EI AL  NNTW    L  GK PIG KWVY+IK  ++GS+
Sbjct: 82  EEPKFYHQAVKSQEWVVAMKAEIDALTANNTWTIVDLTSGKHPIGCKWVYKIKYRSDGSV 141

Query: 441 ERYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAFLHGD 262
           ERYKARLVAKG+ Q EG+D+ ETFAPVAK+ TVR LL++A    W++ QLD+NNAFLHGD
Sbjct: 142 ERYKARLVAKGFTQTEGLDYFETFAPVAKLTTVRLLLAVASSQTWFLHQLDVNNAFLHGD 201

Query: 261 LHEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSYVDTS 82
           L EEVYM +PQG   +  PN VCKL KSLYGLKQA+RQW+ KL+T L   G+K S  D S
Sbjct: 202 LEEEVYMTIPQGVVCS-KPNQVCKLHKSLYGLKQASRQWYNKLSTCLLSFGYKHSPHDHS 260

Query: 81  LLTIKYNGTITSLLVYVDDILLVSKD 4
           L T   NG  T+LL+YVDD++L   D
Sbjct: 261 LFTKTANGLFTALLIYVDDLILAGTD 286


>gb|PKI51032.1| hypothetical protein CRG98_028581 [Punica granatum]
          Length = 359

 Score =  266 bits (681), Expect = 4e-80
 Identities = 141/272 (51%), Positives = 177/272 (65%), Gaps = 9/272 (3%)
 Frame = -1

Query: 792 RQSTRLKSIPSKLSGFH-------YTLPKSFTNSILSKHHHS--NFINYRNLSQSNLHFI 640
           R+S R++S P  L  F        YT P S T+S  S   HS   +++Y   S   L ++
Sbjct: 22  RRSDRIRSTPKYLKDFEVRIHTALYTPPSSPTSSKSSGMVHSIQQYLSYSGASNRYLAYV 81

Query: 639 NTVTSISEPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKL 460
           + + S  EP SY  A+ +PRW+EAM +EI+ALE N TW    LPPGK PI  +WVY+IK 
Sbjct: 82  SALDSDVEPTSYQDAAINPRWREAMAEEIKALEANGTWTIERLPPGKRPIDCRWVYKIKR 141

Query: 459 NANGSIERYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINN 280
            ANGSIERYKARLVAKG+ Q EG+DF ETFAPVAK+VTVRCLL++AV   W + Q+D+NN
Sbjct: 142 RANGSIERYKARLVAKGFTQIEGVDFHETFAPVAKLVTVRCLLAVAVAKGWEIHQMDVNN 201

Query: 279 AFLHGDLHEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQ 100
           AFLHGDL EEVYM +P GYS +     VC+L KSLYGL+QA R W+ KL   +   GF+Q
Sbjct: 202 AFLHGDLDEEVYMHLPPGYSSS-RQGIVCRLQKSLYGLRQAPRNWYAKLAESMSHYGFRQ 260

Query: 99  SYVDTSLLTIKYNGTITSLLVYVDDILLVSKD 4
           S  D SL          + LVYVDDIL+V  +
Sbjct: 261 SGADHSLFVFNRGDIFLAALVYVDDILVVGNN 292


>ref|XP_021652040.1| uncharacterized protein LOC110643835 [Hevea brasiliensis]
          Length = 1095

 Score =  284 bits (726), Expect = 5e-80
 Identities = 148/265 (55%), Positives = 187/265 (70%), Gaps = 2/265 (0%)
 Frame = -1

Query: 792  RQSTRLKSIPSKLSGFHYTLPKSFTNSILSK--HHHSNFINYRNLSQSNLHFINTVTSIS 619
            +QS R +  PS L  +H  L  S   +  S   +  S F++Y +LS S  +F  ++T+  
Sbjct: 508  KQSCRTRRKPSYLQDYHCNLSSSTLAAENSGILYPLSIFVSYTSLSPSYKNFFLSITTPI 567

Query: 618  EPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNANGSIE 439
            EP SY QA K   W+EAM  EI ALEQN TWV T LP GK PIG KWVY+IK   +GSIE
Sbjct: 568  EPKSYSQAIKFDCWKEAMQAEISALEQNKTWVLTDLPSGKVPIGCKWVYKIKHKVDGSIE 627

Query: 438  RYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAFLHGDL 259
            RYKARLVAKGY Q EGI++ +TF+PVAKM  VR LL++A  +NW+++QLD+NNAFLHGDL
Sbjct: 628  RYKARLVAKGYTQTEGINYFDTFSPVAKMTIVRLLLALAAMHNWFLKQLDVNNAFLHGDL 687

Query: 258  HEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSYVDTSL 79
            HEEVYM++PQG+S +  PN VCKL KSLYGLKQA+RQWF KL+T L  +G+ QS  D SL
Sbjct: 688  HEEVYMVLPQGFSSS-KPNQVCKLLKSLYGLKQASRQWFSKLSTALVSIGYTQSKSDYSL 746

Query: 78   LTIKYNGTITSLLVYVDDILLVSKD 4
               K + + T+LLVYVDD++L   D
Sbjct: 747  FVKKTSTSFTALLVYVDDVILAGDD 771


>ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794221 [Glycine max]
          Length = 1150

 Score =  284 bits (727), Expect = 6e-80
 Identities = 145/264 (54%), Positives = 189/264 (71%), Gaps = 1/264 (0%)
 Frame = -1

Query: 792  RQSTRLKSIPSKLSGFHYTLPKS-FTNSILSKHHHSNFINYRNLSQSNLHFINTVTSISE 616
            R++ R+++ P+K + +  +   +  TN   +KH  S+ I+Y  LS S   FI  +++ SE
Sbjct: 261  RRTDRIRTRPTKYTDYQTSFTSATITNHPGTKHPISSVISYNKLSSSYHSFILNISANSE 320

Query: 615  PHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNANGSIER 436
            P SY +A K   W +AM  EI ALE+NNTWV T LP  K+ IG KWVY+IK N++GSIER
Sbjct: 321  PKSYNEACKHDSWVQAMHDEISALERNNTWVLTDLPQHKNVIGCKWVYKIKHNSDGSIER 380

Query: 435  YKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAFLHGDLH 256
            YKARLVAKGY Q EG+D+ +TF+PVAK+ TVR LL++A  NNWY+ QLD+NNAFLHG LH
Sbjct: 381  YKARLVAKGYTQIEGLDYLDTFSPVAKITTVRLLLALAALNNWYLRQLDVNNAFLHGGLH 440

Query: 255  EEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSYVDTSLL 76
            EEVYM++P G  K+  P  VCKL +SLYGLKQA+RQW+ +L+TFL   GFKQS  D SL 
Sbjct: 441  EEVYMVLPPG-MKSAKPGQVCKLQRSLYGLKQASRQWYARLSTFLAHHGFKQSVADYSLF 499

Query: 75   TIKYNGTITSLLVYVDDILLVSKD 4
            T+K   + T+LLVYVDDI+L   D
Sbjct: 500  TLKKANSFTALLVYVDDIVLSGND 523


>gb|PNX84630.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 543

 Score =  271 bits (692), Expect = 2e-79
 Identities = 139/261 (53%), Positives = 184/261 (70%), Gaps = 2/261 (0%)
 Frame = -1

Query: 792 RQSTRLKSIPSKLSGFHYTLPKSFTNSILSKHHH--SNFINYRNLSQSNLHFINTVTSIS 619
           R+STR++S P  L+ +   L  +++ S      +  SNF +  NLS S+  F+ +V +  
Sbjct: 178 RKSTRMRSQPGHLNDYVCNLSDAYSKSSSQGMLYPISNFHSCANLSTSHTKFVLSVNNDV 237

Query: 618 EPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNANGSIE 439
           EP++Y QAS    W +AM  E+ AL+QN TW+    PP   PIGSKWVY++K  A+GSIE
Sbjct: 238 EPNTYHQASLQDCWVQAMNAELHALQQNKTWILVDAPPNVKPIGSKWVYKVKHKADGSIE 297

Query: 438 RYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAFLHGDL 259
           RYKARLVAKGY Q EGIDF ETF+PVAK+ TVR L+++A   +W++ QLD+NNAFLHG+L
Sbjct: 298 RYKARLVAKGYTQVEGIDFFETFSPVAKITTVRTLIALAAIKSWHLHQLDVNNAFLHGEL 357

Query: 258 HEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSYVDTSL 79
            EEVYM +PQG + T  PN VCKL KSLYGLKQA+R+W+EKLT+ L   G+ QS  D SL
Sbjct: 358 QEEVYMSIPQGVT-TSKPNQVCKLLKSLYGLKQASRKWYEKLTSVLLAQGYMQSSSDHSL 416

Query: 78  LTIKYNGTITSLLVYVDDILL 16
            T+  + + T+LLVYVDDI+L
Sbjct: 417 FTLHKDSSFTALLVYVDDIIL 437


>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
           from transposon TNT 1-94 [Gossypium raimondii]
          Length = 683

 Score =  274 bits (701), Expect = 2e-79
 Identities = 142/251 (56%), Positives = 179/251 (71%), Gaps = 1/251 (0%)
 Frame = -1

Query: 765 PSKLSGF-HYTLPKSFTNSILSKHHHSNFINYRNLSQSNLHFINTVTSISEPHSYLQASK 589
           PS L  + HY LP + TN   + H   N I+Y NLS  +LHF   +++  EP +Y QASK
Sbjct: 124 PSYLQDYQHYQLPAA-TNHPGTPHSIFNCISYHNLSPQHLHFTLAISASIEPKTYKQASK 182

Query: 588 DPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNANGSIERYKARLVAKG 409
              W EAM  EI ALEQNNTW  TTLPPGK+P G KWV+R+K  A+GS ERYKARLVAKG
Sbjct: 183 FTHWNEAMQAEINALEQNNTWTMTTLPPGKTPXGCKWVFRVKHRADGSTERYKARLVAKG 242

Query: 408 YNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAFLHGDLHEEVYMIVPQ 229
           Y Q  G+D+ +TF+PVAK+ TVR LL++A   +W+++QLD+NNAFLHGDL+E+VYM+ P 
Sbjct: 243 YTQ-IGVDYFDTFSPVAKITTVRLLLALATSRHWHIQQLDVNNAFLHGDLNEDVYMLPPP 301

Query: 228 GYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSYVDTSLLTIKYNGTIT 49
           G+S       VCKL KS+YGLKQA+RQWF KLTT L  LG+ QS  D S+ T K++   T
Sbjct: 302 GFSH--DSTKVCKLHKSIYGLKQASRQWFSKLTTALISLGYIQSTADHSMFTKKHSEDFT 359

Query: 48  SLLVYVDDILL 16
            LL+YVDDI+L
Sbjct: 360 VLLIYVDDIIL 370


>gb|PRQ38882.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 2324

 Score =  283 bits (723), Expect = 2e-78
 Identities = 141/273 (51%), Positives = 186/273 (68%), Gaps = 10/273 (3%)
 Frame = -1

Query: 792  RQSTRLKSIPSKLSGF---HYTLPKSFTNSIL-------SKHHHSNFINYRNLSQSNLHF 643
            R+S R++    KL  +   H  LP    +S L       +++  SN+I+Y   S S+  F
Sbjct: 1123 RRSERVRKPNVKLKDYVCSHVVLPTQEDSSSLWPFPNKGTRYPLSNYISYHRFSSSHRSF 1182

Query: 642  INTVTSISEPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIK 463
            I  +T   EP+S+ +A K+P+WQEAMT EIQALE NNTW  T LPPGK PIG KWVY+IK
Sbjct: 1183 IANITRSVEPNSFAEAIKNPQWQEAMTSEIQALEANNTWSLTPLPPGKEPIGCKWVYKIK 1242

Query: 462  LNANGSIERYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDIN 283
             N++G+IERYKARLVAKGY Q EG+D+ ETF+P AK+ T RCLL+IA   NW + Q+D+ 
Sbjct: 1243 YNSDGTIERYKARLVAKGYTQVEGVDYCETFSPTAKLTTFRCLLAIAASRNWSLHQMDVQ 1302

Query: 282  NAFLHGDLHEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFK 103
            NAFLHGDLHEEVYM+ P G+S+    N VC+L KSLYGLKQA+R WF K +  ++  G++
Sbjct: 1303 NAFLHGDLHEEVYMLPPPGFSRQ-GENLVCRLNKSLYGLKQASRNWFSKFSNAIQKAGYR 1361

Query: 102  QSYVDTSLLTIKYNGTITSLLVYVDDILLVSKD 4
            QS  D SL T     + T++L+YVDDI++   D
Sbjct: 1362 QSKADYSLFTRVVGNSFTAVLIYVDDIVITGND 1394



 Score =  175 bits (444), Expect = 3e-42
 Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 1/213 (0%)
 Frame = -3

Query: 1726 GTYRHHTLNKCKYFLTIVDDHTRATWTYLLSSKHHVSSTFQNFYVYVQTQFNCKIKTIRS 1547
            G ++  + +  +YFLTIVDD +R TW YL+ +K    +  ++F+ + +TQFN K++ IRS
Sbjct: 804  GPHKIASHSGARYFLTIVDDFSRCTWLYLMHAKSETQNLLKSFFAFTETQFNQKVQHIRS 863

Query: 1546 DXXXXXXXXXXXXFLQSKGVIHQTSCPYKPQQNGRAERKHKHLLEMARSIYFQAHFPIHF 1367
            D              Q+ G+IHQ SC Y PQQNG  ERKH+H++ +AR++ FQA+ P+ F
Sbjct: 864  DNGSEFLSMRSF--FQANGIIHQHSCVYTPQQNGVVERKHRHIITIARALLFQANLPLEF 921

Query: 1366 WGYCILASTYIINRLPSRVLDNKSXXXXXXXXXXXXXXLRVIGCQAH-TYTHNKDKFGPK 1190
            W  C+L   Y+INRLP+ +L  KS              +RV GC A+ T  H K KF P+
Sbjct: 922  WAECVLTVVYLINRLPAPLLSGKSPFEKIFQRVPQYSHIRVFGCLAYATNVHPKQKFDPR 981

Query: 1189 STPTVLLGYPHNQKGYLLYDPHTHKTIISRNVL 1091
            +   + +GYP  QK Y LYD  T K   SR+V+
Sbjct: 982  AHKCIFVGYPFGQKAYKLYDLTTKKFFTSRDVV 1014


>ref|XP_024196177.1| uncharacterized protein LOC112199378 [Rosa chinensis]
          Length = 2337

 Score =  283 bits (723), Expect = 2e-78
 Identities = 141/273 (51%), Positives = 186/273 (68%), Gaps = 10/273 (3%)
 Frame = -1

Query: 792  RQSTRLKSIPSKLSGF---HYTLPKSFTNSIL-------SKHHHSNFINYRNLSQSNLHF 643
            R+S R++    KL  +   H  LP    +S L       +++  SN+I+Y   S S+  F
Sbjct: 1123 RRSERVRKPNVKLKDYVCSHVVLPTQEDSSSLWPFPNKGTRYPLSNYISYHRFSSSHRSF 1182

Query: 642  INTVTSISEPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIK 463
            I  +T   EP+S+ +A K+P+WQEAMT EIQALE NNTW  T LPPGK PIG KWVY+IK
Sbjct: 1183 IANITRSVEPNSFAEAIKNPQWQEAMTSEIQALEANNTWSLTPLPPGKEPIGCKWVYKIK 1242

Query: 462  LNANGSIERYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDIN 283
             N++G+IERYKARLVAKGY Q EG+D+ ETF+P AK+ T RCLL+IA   NW + Q+D+ 
Sbjct: 1243 YNSDGTIERYKARLVAKGYTQVEGVDYCETFSPTAKLTTFRCLLAIAASRNWSLHQMDVQ 1302

Query: 282  NAFLHGDLHEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFK 103
            NAFLHGDLHEEVYM+ P G+S+    N VC+L KSLYGLKQA+R WF K +  ++  G++
Sbjct: 1303 NAFLHGDLHEEVYMLPPPGFSRQ-GENLVCRLNKSLYGLKQASRNWFSKFSNAIQKAGYR 1361

Query: 102  QSYVDTSLLTIKYNGTITSLLVYVDDILLVSKD 4
            QS  D SL T     + T++L+YVDDI++   D
Sbjct: 1362 QSKADYSLFTRVVGNSFTAVLIYVDDIVITGND 1394



 Score =  175 bits (444), Expect = 3e-42
 Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 1/213 (0%)
 Frame = -3

Query: 1726 GTYRHHTLNKCKYFLTIVDDHTRATWTYLLSSKHHVSSTFQNFYVYVQTQFNCKIKTIRS 1547
            G ++  + +  +YFLTIVDD +R TW YL+ +K    +  ++F+ + +TQFN K++ IRS
Sbjct: 804  GPHKIASHSGARYFLTIVDDFSRCTWLYLMHAKSETQNLLKSFFAFTETQFNQKVQHIRS 863

Query: 1546 DXXXXXXXXXXXXFLQSKGVIHQTSCPYKPQQNGRAERKHKHLLEMARSIYFQAHFPIHF 1367
            D              Q+ G+IHQ SC Y PQQNG  ERKH+H++ +AR++ FQA+ P+ F
Sbjct: 864  DNGSEFLSMRSF--FQANGIIHQHSCVYTPQQNGVVERKHRHIITIARALLFQANLPLEF 921

Query: 1366 WGYCILASTYIINRLPSRVLDNKSXXXXXXXXXXXXXXLRVIGCQAH-TYTHNKDKFGPK 1190
            W  C+L   Y+INRLP+ +L  KS              +RV GC A+ T  H K KF P+
Sbjct: 922  WAECVLTVVYLINRLPAPLLSGKSPFEKIFQRVPQYSHIRVFGCLAYATNVHPKQKFDPR 981

Query: 1189 STPTVLLGYPHNQKGYLLYDPHTHKTIISRNVL 1091
            +   + +GYP  QK Y LYD  T K   SR+V+
Sbjct: 982  AHKCIFVGYPFGQKAYKLYDLTTKKFFTSRDVV 1014


>ref|XP_020423926.1| uncharacterized protein LOC109950224 [Prunus persica]
          Length = 463

 Score =  265 bits (677), Expect = 3e-78
 Identities = 137/273 (50%), Positives = 186/273 (68%), Gaps = 10/273 (3%)
 Frame = -1

Query: 792 RQSTRLKSIPSKLSGFHY-------TLPKSFTNSIL---SKHHHSNFINYRNLSQSNLHF 643
           R+S+R    P+ L  FH        T P S TN ++   + H  S  ++Y +LS S+  +
Sbjct: 179 RRSSRSTRPPAYLQDFHLASGLPSRTAPSSSTNLVIPSGTAHPLSQSLSYAHLSHSHKTY 238

Query: 642 INTVTSISEPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIK 463
           +  +T + EP S+ QA + P+W+ AM  E+ AL+ N TW   +LPP K PIG KWVY++K
Sbjct: 239 LAQLTLLQEPTSFSQAVQIPQWRAAMKSEVDALQANGTWSLVSLPPHKRPIGCKWVYKVK 298

Query: 462 LNANGSIERYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDIN 283
           L A+G++ERYKARLVAKGY+Q EGID++ETFA VAK+VTVR LLS+A  + W++ QLD+N
Sbjct: 299 LKADGTVERYKARLVAKGYSQVEGIDYQETFASVAKLVTVRVLLSVASLHGWHLHQLDVN 358

Query: 282 NAFLHGDLHEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFK 103
           NAFL+GDL EEV+M +P G+ +    N VC+L KSLYGLKQA+RQWF KL+T LK  GF+
Sbjct: 359 NAFLNGDLDEEVFMSLPPGFGRK-GENRVCQLHKSLYGLKQASRQWFIKLSTALKAAGFQ 417

Query: 102 QSYVDTSLLTIKYNGTITSLLVYVDDILLVSKD 4
           QS  D SL   +  G   +LLVYVDD++L   +
Sbjct: 418 QSRSDYSLFVRRQEGNFLALLVYVDDVILAGNN 450


>gb|PNY00469.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 778

 Score =  273 bits (698), Expect = 4e-78
 Identities = 141/261 (54%), Positives = 178/261 (68%), Gaps = 2/261 (0%)
 Frame = -1

Query: 792 RQSTRLKSIPSKLSGFHYTLPKSFTNSILSK--HHHSNFINYRNLSQSNLHFINTVTSIS 619
           R STR+   PS L  +H  +    TN + S   H  S+ ++Y   S +   F  +++S  
Sbjct: 209 RVSTRVTRPPSYLQDYHCNIKSGCTNQVSSNIVHPLSSVLSYNTCSPAYKLFCCSISSTI 268

Query: 618 EPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNANGSIE 439
           EP +Y QASK   W++AM  EI ALE N TW    LP GK PIG KWVY+IK +ANG+IE
Sbjct: 269 EPTTYNQASKFDCWKKAMDAEITALELNKTWTVVDLPCGKVPIGCKWVYKIKYHANGTIE 328

Query: 438 RYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAFLHGDL 259
           RYKARLVAKGY Q EG+D+ +TF+PVAKM TVR LL++A    W++EQLD+NNAFLHGDL
Sbjct: 329 RYKARLVAKGYTQMEGVDYFDTFSPVAKMTTVRVLLAVAAVRGWHLEQLDVNNAFLHGDL 388

Query: 258 HEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSYVDTSL 79
           HEEVYM +P GY  T  P+ VCKL KSLYGLKQA+RQW+ KL+  L  LG++ S  D SL
Sbjct: 389 HEEVYMSLPPGYDAT--PSKVCKLNKSLYGLKQASRQWYSKLSAALISLGYQASQADHSL 446

Query: 78  LTIKYNGTITSLLVYVDDILL 16
               +  + T+LLVYVDDI+L
Sbjct: 447 YVKSHGTSFTALLVYVDDIVL 467



 Score = 65.5 bits (158), Expect = 3e-07
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
 Frame = -3

Query: 1366 WGYCILASTYIINRLPSRVLDNKSXXXXXXXXXXXXXXLRVIGCQ--AHTYTHNKDKFGP 1193
            W +C+  + ++INR+PS +L +K+              L+V GC   A T   ++ KF  
Sbjct: 2    WNFCVQHAVHVINRIPSPLLKSKTPYELLFKLSPTLLHLKVFGCLSFATTLQAHRTKFDS 61

Query: 1192 KSTPTVLLGYPHNQKGYLLYDPHTHKTIISRNVL 1091
            ++   V +GY    KGY+LYD H+H   +SRNV+
Sbjct: 62   RARKCVFIGYKDGTKGYILYDLHSHNIFLSRNVV 95


>gb|KYP61041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 788

 Score =  273 bits (697), Expect = 7e-78
 Identities = 139/264 (52%), Positives = 184/264 (69%), Gaps = 1/264 (0%)
 Frame = -1

Query: 792  RQSTRLKSIPSKLSGFHYTLPKSFTNSILSKHHHSNFINYRNLSQSNLHFINTVTSISEP 613
            R+S+R    PS L  FH  +  +   S   ++   +F++Y  LS S  HF+ +++   EP
Sbjct: 526  RRSSRTHLPPSYLKDFHCNIASTIPTSSTVRYPLHSFLSYNRLSNSFHHFVCSISVTIEP 585

Query: 612  HSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNANGSIERY 433
            HSY +ASK   W +AM  E+ AL+ NNTW  T LPP K PIG +WVY++K NA+G+IERY
Sbjct: 586  HSYSEASKLECWVKAMKDELAALKMNNTWTLTNLPPDKVPIGCRWVYKVKHNADGTIERY 645

Query: 432  KARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAFLHGDLHE 253
            KARLV+KGYNQ E +DF +TF+PVAK+ T R LL++A  NNWY++QLD+NNAFLHG+LHE
Sbjct: 646  KARLVSKGYNQLEDLDFLDTFSPVAKITTFRMLLALASINNWYLKQLDVNNAFLHGELHE 705

Query: 252  EVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSYVDTSLLT 73
            EVYM VP G   T  P  VC L +SLYGLKQA+RQW+ KL++FL   G+  S  D SL  
Sbjct: 706  EVYMHVPPGL--TAQPGQVCLLKRSLYGLKQASRQWYAKLSSFLLLHGYHHSQADHSLF- 762

Query: 72   IKYNG-TITSLLVYVDDILLVSKD 4
            +K++G  IT+LL+YVDDI+L   D
Sbjct: 763  LKFSGPNITTLLIYVDDIVLYGND 786



 Score =  147 bits (371), Expect = 2e-33
 Identities = 81/203 (39%), Positives = 108/203 (53%), Gaps = 2/203 (0%)
 Frame = -3

Query: 1693 KYFLTIVDDHTRATWTYLLSSKHHVSSTFQNFYVYVQTQFNCKIKTIRSDXXXXXXXXXX 1514
            +YFLTIVDD TR TW YL++SK        NF   V+ QF+ K+K IRSD          
Sbjct: 201  RYFLTIVDDFTRYTWVYLMNSKSETRKHIINFISLVERQFDTKVKIIRSDNGAEFLMNNF 260

Query: 1513 XXFLQSKGVIHQTSCPYKPQQNGRAERKHKHLLEMARSIYFQAHFPIHFWGYCILASTYI 1334
                Q KG+IHQTSC   P+QNG  ERKH+HLL + R++ F    P  FW + I  +  I
Sbjct: 261  Y---QEKGIIHQTSCIETPEQNGIVERKHQHLLNVTRALLFHNGLPPLFWCFAIQHAATI 317

Query: 1333 INRLPSRVLDNKSXXXXXXXXXXXXXXLRVIGCQAH--TYTHNKDKFGPKSTPTVLLGYP 1160
            IN +P+ +L   S               RV GC  +  T   N+ K   ++ P + LG+ 
Sbjct: 318  INCIPTPILHETSPFIKLYNKQYDISLFRVFGCLCYESTLVANRKKLDARADPCIFLGFK 377

Query: 1159 HNQKGYLLYDPHTHKTIISRNVL 1091
            +  KGYLLY+  TH   +SRNV+
Sbjct: 378  NYTKGYLLYNLKTHSLDVSRNVI 400


>gb|KYP37906.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1097

 Score =  277 bits (708), Expect = 1e-77
 Identities = 138/268 (51%), Positives = 188/268 (70%), Gaps = 5/268 (1%)
 Frame = -1

Query: 792  RQSTRLKSIPSKLSGFHYTLPKSFTNSILSKHHHS--NFINYRNLSQSNLHFINTVTSIS 619
            ++STR + +PS L  +H+TL  +  +  +S+  +S  N I+Y NLS S   F  +++SI 
Sbjct: 581  QKSTRPRKLPSYLHDYHHTLLTTHNSPTISQPLYSIHNHISYSNLSPSQKAFSLSISSIK 640

Query: 618  EPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNANGSIE 439
            EP+SY++A +D  W+ A+  E+ ALE+NNTW+ T LPP K  +G KWV+++K N++G+IE
Sbjct: 641  EPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFNSDGTIE 700

Query: 438  RYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAFLHGDL 259
            R+KARLVAKGY Q EG+D+ +TF+PV KM TVR LL++A   NW++ QLD+N  FLHGDL
Sbjct: 701  RHKARLVAKGYTQTEGLDYLDTFSPVVKMTTVRTLLAVATAKNWHIHQLDVNTTFLHGDL 760

Query: 258  HEEVYMIVPQGYSKTLPP---NTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSYVD 88
            HEEVYM  P G   T+ P   N VCKL KSLYGLKQA+RQW  KLT+ L   GFKQS  D
Sbjct: 761  HEEVYMTPPPGL--TVSPHQSNCVCKLVKSLYGLKQASRQWNAKLTSVLIDSGFKQSMAD 818

Query: 87   TSLLTIKYNGTITSLLVYVDDILLVSKD 4
             SL T ++    T++LVYVDD++L   D
Sbjct: 819  YSLFTKQFGAKFTAILVYVDDLVLAGND 846



 Score =  149 bits (376), Expect = 8e-34
 Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 2/202 (0%)
 Frame = -3

Query: 1693 KYFLTIVDDHTRATWTYLLSSKHHVSSTFQNFYVYVQTQFNCKIKTIRSDXXXXXXXXXX 1514
            ++FLTIVDD +R TW Y +  K  V+    +F   ++ QF  K+K +RSD          
Sbjct: 323  RFFLTIVDDKSRHTWVYFMKHKSEVADHLSSFITLIENQFGKKVKCVRSDNGPEFLLKNF 382

Query: 1513 XXFLQSKGVIHQTSCPYKPQQNGRAERKHKHLLEMARSIYFQAHFPIHFWGYCILASTYI 1334
                  KG++HQTSC   PQQNG  ERKH+H++ +AR++  Q++ P  FW Y +  + ++
Sbjct: 383  Y---HEKGILHQTSCVETPQQNGIVERKHQHIMTVARALVMQSNLPKSFWFYAVSHAVFL 439

Query: 1333 INRLPSRVLDNKSXXXXXXXXXXXXXXLRVIGCQAHTYT--HNKDKFGPKSTPTVLLGYP 1160
            INR PS  L+NK               ++V GC A+  T  HN+ KF P+    V LG+ 
Sbjct: 440  INRQPSSFLENKIPYEIIYNALPDLAGIKVFGCLAYATTLHHNRKKFDPRGRRCVFLGFK 499

Query: 1159 HNQKGYLLYDPHTHKTIISRNV 1094
               KG +LYD ++ +T +SR+V
Sbjct: 500  PQVKGSILYDLNSRETFLSRHV 521


>gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1002

 Score =  275 bits (704), Expect = 2e-77
 Identities = 138/268 (51%), Positives = 187/268 (69%), Gaps = 5/268 (1%)
 Frame = -1

Query: 792  RQSTRLKSIPSKLSGFHYTLPKSFTNSILSKHHHS--NFINYRNLSQSNLHFINTVTSIS 619
            R+STR + +PS L  +H+TL  +  +  +S+  +S  N I+Y NLS S   F  +++SI 
Sbjct: 425  RKSTRPRKLPSYLHDYHHTLLTTHNSPTISQPLYSIHNHISYSNLSPSQKAFSLSISSIK 484

Query: 618  EPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNANGSIE 439
            EP+SY++A +D  W+ A+  E+ ALE+NNTW+ T LPP K  +G KWV+++K N++G+IE
Sbjct: 485  EPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFNSDGTIE 544

Query: 438  RYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAFLHGDL 259
            R+KARLVAKGY Q E +D+ +TF+PV KM TVR LL++A   NW++ QLD+N  FLHGDL
Sbjct: 545  RHKARLVAKGYTQTETLDYLDTFSPVVKMTTVRTLLAVATAKNWHIHQLDVNTTFLHGDL 604

Query: 258  HEEVYMIVPQGYSKTLPP---NTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSYVD 88
            HEEVYM  P G   T+ P   N VCKL KSLYGLKQA+RQW  KLT+ L   GFKQS  D
Sbjct: 605  HEEVYMTPPPGL--TVSPHQSNCVCKLVKSLYGLKQASRQWNAKLTSVLIDSGFKQSMAD 662

Query: 87   TSLLTIKYNGTITSLLVYVDDILLVSKD 4
             SL T ++    T++LVYVDD++L   D
Sbjct: 663  YSLFTKQFGAKFTAILVYVDDLVLAGND 690



 Score =  150 bits (379), Expect = 3e-34
 Identities = 76/202 (37%), Positives = 112/202 (55%), Gaps = 2/202 (0%)
 Frame = -3

Query: 1693 KYFLTIVDDHTRATWTYLLSSKHHVSSTFQNFYVYVQTQFNCKIKTIRSDXXXXXXXXXX 1514
            K+FLTIVDD +R TW Y +  K  V+    +F   ++ QF  K+K +RSD          
Sbjct: 167  KFFLTIVDDKSRHTWVYFMKHKSEVADHLSSFITLIENQFGKKVKCVRSDNGPEFLLKNF 226

Query: 1513 XXFLQSKGVIHQTSCPYKPQQNGRAERKHKHLLEMARSIYFQAHFPIHFWGYCILASTYI 1334
                  KG++HQTSC   PQQNG  ERKH+H++ +AR++  Q++ P  FW Y +  + ++
Sbjct: 227  Y---HEKGILHQTSCVETPQQNGIVERKHQHIMTVARALVMQSNLPKSFWFYAVSHAVFL 283

Query: 1333 INRLPSRVLDNKSXXXXXXXXXXXXXXLRVIGCQAHTYT--HNKDKFGPKSTPTVLLGYP 1160
            INR PS  L+NK               ++V GC A+  T  HN+ KF P+    V LG+ 
Sbjct: 284  INRQPSSFLENKIPYEIIYNALPDLAGIKVFGCLAYATTLHHNRKKFDPRGRRCVFLGFK 343

Query: 1159 HNQKGYLLYDPHTHKTIISRNV 1094
               KG +LYD ++ +T +SR+V
Sbjct: 344  PQVKGSILYDLNSRETFLSRHV 365


>gb|PRQ55089.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1285

 Score =  278 bits (711), Expect = 2e-77
 Identities = 140/273 (51%), Positives = 187/273 (68%), Gaps = 10/273 (3%)
 Frame = -1

Query: 792  RQSTRLKSIPSKLSGFHYTL-------PKSFTNSILSK---HHHSNFINYRNLSQSNLHF 643
            R+STR   +P+ L  FH          P S +N + +    H  S+ ++Y NLS  +  F
Sbjct: 697  RKSTRATKLPTALQDFHIDAALPTRLAPSSSSNEVTTPGTAHSLSHVLSYANLSSPHRTF 756

Query: 642  INTVTSISEPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIK 463
               +T   EP S+ QA KDP+W+EAM  E+QAL+ N TW     P  K PIG KWVY+IK
Sbjct: 757  TANITLQREPTSFSQAVKDPKWREAMRLEVQALQDNKTWSLVPPPAHKRPIGCKWVYKIK 816

Query: 462  LNANGSIERYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDIN 283
             N +G+IERYKARLVAKGY+Q EG+D++ETFAPVAK+ TVR LLS+A + NW++ QLD+N
Sbjct: 817  YNPDGTIERYKARLVAKGYSQVEGLDYRETFAPVAKLTTVRVLLSLAAQQNWHLHQLDVN 876

Query: 282  NAFLHGDLHEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFK 103
            NAFL+GDLHE+VYM +P G+ +    + VCKL KSLYGL+QA++QWF KL++ LK  GFK
Sbjct: 877  NAFLNGDLHEDVYMHLPPGFERK-GEHKVCKLHKSLYGLRQASKQWFLKLSSALKSAGFK 935

Query: 102  QSYVDTSLLTIKYNGTITSLLVYVDDILLVSKD 4
            QS+ D S+    + GT T+LLVYVDD++L   +
Sbjct: 936  QSWSDYSMFVRSHQGTFTALLVYVDDVILAGNN 968



 Score =  176 bits (446), Expect = 1e-42
 Identities = 93/214 (43%), Positives = 120/214 (56%), Gaps = 2/214 (0%)
 Frame = -3

Query: 1726 GTYRHHTLNKCKYFLTIVDDHTRATWTYLLSSKHHVSSTFQNFYVYVQTQFNCKIKTIRS 1547
            G Y   T +  +YFLTIVDDH+R+TW YL+  K    +   +F      QF   +  +RS
Sbjct: 378  GGYHVPTFSGAQYFLTIVDDHSRSTWVYLMKHKSEARTLLIHFIHLAANQFGKNVMVVRS 437

Query: 1546 DXXXXXXXXXXXXFLQSKGVIHQTSCPYKPQQNGRAERKHKHLLEMARSIYFQAHFPIHF 1367
            D               SKG+IHQTSC   PQQNG AERKH+HLL MAR++ FQA+ P  F
Sbjct: 438  DNGPEFKIPQFY---SSKGIIHQTSCVNTPQQNGVAERKHRHLLNMARALLFQANLPKPF 494

Query: 1366 WGYCILASTYIINRLPSRVLDNKSXXXXXXXXXXXXXXLRVIGCQAHTYTH--NKDKFGP 1193
            WG  IL + Y+INR P+ +L  K+              LRV GCQ    TH     KF P
Sbjct: 495  WGDAILTAAYLINRTPTPILQGKTPFEKLFHKEPSYSHLRVFGCQCFVSTHPTRPSKFDP 554

Query: 1192 KSTPTVLLGYPHNQKGYLLYDPHTHKTIISRNVL 1091
            +S   V LGYPH QKGY +Y+  T K+++SR+V+
Sbjct: 555  RSMECVFLGYPHGQKGYKVYNLTTKKSLVSRDVI 588


>gb|OMO49485.1| Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
           capsularis]
          Length = 506

 Score =  264 bits (674), Expect = 3e-77
 Identities = 131/271 (48%), Positives = 179/271 (66%), Gaps = 11/271 (4%)
 Frame = -1

Query: 780 RLKSIPSKLSGFHYTLPKSFTNSILSKHHH-----------SNFINYRNLSQSNLHFINT 634
           R + +   LSG+ YTLP S   +  + H             S+ I+Y     +++ F+  
Sbjct: 181 RTRQVSKTLSGYDYTLPPSLLPASSTSHSPAPSANSTVYPLSHTISYSKFFNTHVAFLAA 240

Query: 633 VTSISEPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNA 454
           ++SI EP S+ QA K   W++AM KEI ALE N+TW  T+LPP K  I SKW+Y++K N 
Sbjct: 241 ISSIDEPKSFSQAVKHVHWRDAMEKEISALEANHTWTLTSLPPVKRAIDSKWIYKVKFNP 300

Query: 453 NGSIERYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAF 274
           +G++ERYKARLVAKGY Q EG+DF ETFAPVAK+VT++CLL++A   NW + QLD+NNAF
Sbjct: 301 DGTVERYKARLVAKGYTQIEGVDFHETFAPVAKLVTIQCLLAVASVRNWELHQLDVNNAF 360

Query: 273 LHGDLHEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSY 94
           LHGDL EEVYM +PQ ++K    + VC+L KSLYGLKQA+R W++K T  L   GF QS 
Sbjct: 361 LHGDLEEEVYMKIPQDFAKQ-GEHRVCRLQKSLYGLKQASRNWYQKFTQALLTAGFIQST 419

Query: 93  VDTSLLTIKYNGTITSLLVYVDDILLVSKDA 1
            D SL T     +  ++L+YVDD+++   D+
Sbjct: 420 SDHSLFTSTQGESYIAVLIYVDDVIVTGNDS 450


>gb|PNX84823.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 452

 Score =  261 bits (668), Expect = 5e-77
 Identities = 136/272 (50%), Positives = 183/272 (67%), Gaps = 9/272 (3%)
 Frame = -1

Query: 792 RQSTRLKSIPSKLSGFHYTL---------PKSFTNSILSKHHHSNFINYRNLSQSNLHFI 640
           R+STR  + P  L  FH +L         P +  +S   K+  S+FI+Y+NLS S+ HF 
Sbjct: 175 RRSTRPSNPPGYLQDFHCSLLTTSNNDSIPSTSISSSDCKYPLSSFISYQNLSTSHKHFA 234

Query: 639 NTVTSISEPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKL 460
             +++++EP SY +A  D +W+ A+  E+ AL +NNTW  TTLPP K  +G KWV+++KL
Sbjct: 235 FNISTLTEPSSYEEAMHDEQWKNAVNTELAALLKNNTWSMTTLPPNKKAVGCKWVFKLKL 294

Query: 459 NANGSIERYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINN 280
           +A+GSIER+KARLVAKG+ Q EGID+ ETF+PV KM TVR  ++IA   +W + QLD+N 
Sbjct: 295 HADGSIERHKARLVAKGFTQTEGIDYMETFSPVVKMTTVRTFMAIAAAQHWPLFQLDVNT 354

Query: 279 AFLHGDLHEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQ 100
           AFLHGDL+EEVYM  P G +    PN VCKL +SLYGLKQA+RQW  KLT  L   G+KQ
Sbjct: 355 AFLHGDLNEEVYMQPPPGLALE-NPNLVCKLQRSLYGLKQASRQWNAKLTETLISSGYKQ 413

Query: 99  SYVDTSLLTIKYNGTITSLLVYVDDILLVSKD 4
           S  D SL T +     T++LVYVDD+++   D
Sbjct: 414 SKADYSLFTKQSTSGFTAILVYVDDLVMGGTD 445


>gb|OTG09173.1| putative reverse transcriptase, RNA-dependent DNA polymerase
            [Helianthus annuus]
          Length = 962

 Score =  273 bits (698), Expect = 8e-77
 Identities = 137/249 (55%), Positives = 179/249 (71%), Gaps = 3/249 (1%)
 Frame = -1

Query: 753  SGFHYTLPKSFTNSILS---KHHHSNFINYRNLSQSNLHFINTVTSISEPHSYLQASKDP 583
            S  + ++PK F + +L+   K+  +  ++Y  L+  N+ +I+++  ISEP +Y +ASKDP
Sbjct: 401  SSRNISVPKRFQDFVLNSCVKYDINKVVSYACLTADNVAYISSLNKISEPSNYSEASKDP 460

Query: 582  RWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNANGSIERYKARLVAKGYN 403
            RW EAM  E++AL +N TW    LP G+ PIG KWVYR+K  ANG +ERYKARLVAKGYN
Sbjct: 461  RWIEAMNLEMEALMRNQTWDLVDLPSGRKPIGCKWVYRVKYKANGEVERYKARLVAKGYN 520

Query: 402  QREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAFLHGDLHEEVYMIVPQGY 223
            QREG+DF ETF+PV KMVTVRC+LS+AV+N+W + QLD+NNAFL+G + E+VYMI P+GY
Sbjct: 521  QREGLDFGETFSPVVKMVTVRCVLSLAVQNSWTLYQLDVNNAFLYGSISEDVYMIPPEGY 580

Query: 222  SKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSYVDTSLLTIKYNGTITSL 43
                    VCKL KSLYGLKQA R+W EKLT+ L  LGF QS  D SL  +  +  I  L
Sbjct: 581  YNK-SETKVCKLVKSLYGLKQAPRKWNEKLTSVLLELGFVQSSCDHSLYVLTRSNVIVVL 639

Query: 42   LVYVDDILL 16
            LVYVDDI++
Sbjct: 640  LVYVDDIVI 648


>gb|OTG03795.1| putative ribonuclease H-like domain-containing protein [Helianthus
            annuus]
          Length = 1050

 Score =  274 bits (700), Expect = 1e-76
 Identities = 137/267 (51%), Positives = 179/267 (67%), Gaps = 7/267 (2%)
 Frame = -1

Query: 780  RLKSIPSKLSGFHYTLPKSFTN-------SILSKHHHSNFINYRNLSQSNLHFINTVTSI 622
            R  S PS L  FH  LP S  +       S  + H  +N+++Y   S S+  F+  +T+ 
Sbjct: 479  RTISQPSYLKEFHVNLPPSVDHTQPVTDQSSSTVHSLANYVSYEKFSNSHKVFLTAITTH 538

Query: 621  SEPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLPPGKSPIGSKWVYRIKLNANGSI 442
            +EP S+ +A +D  W+ AM KEIQALE+N TW    LP GK  I SKWVY++K   NG I
Sbjct: 539  NEPKSFHEAMQDENWKLAMKKEIQALEENKTWTLEPLPEGKRAIDSKWVYKLKYKPNGEI 598

Query: 441  ERYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLSIAVKNNWYMEQLDINNAFLHGD 262
            ER+KARLVAKGY Q EG+DF +TFAPVAK+VTVR LL++AVK  W + QLD+NNAFLHGD
Sbjct: 599  ERHKARLVAKGYTQMEGVDFHDTFAPVAKLVTVRTLLAVAVKKEWLIHQLDVNNAFLHGD 658

Query: 261  LHEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQWFEKLTTFLKGLGFKQSYVDTS 82
            L EEVYM +PQG++K      VC+L KSLYGLKQA+R W+ K T+ L  +G+KQS+ D S
Sbjct: 659  LDEEVYMKIPQGFAKR-GETRVCRLRKSLYGLKQASRNWYHKFTSSLVDIGYKQSHADHS 717

Query: 81   LLTIKYNGTITSLLVYVDDILLVSKDA 1
            L T K      ++L+YVDD+++   DA
Sbjct: 718  LFTFKDGVNFVAILIYVDDVVITGNDA 744



 Score =  174 bits (441), Expect = 5e-42
 Identities = 93/213 (43%), Positives = 119/213 (55%), Gaps = 2/213 (0%)
 Frame = -3

Query: 1726 GTYRHHTLNKCKYFLTIVDDHTRATWTYLLSSKHHVSSTFQNFYVYVQTQFNCKIKTIRS 1547
            G YR  T     +FLTIVDD +RA W YL+  K         F+  V+TQF   IK IRS
Sbjct: 137  GKYRKPTTTHANFFLTIVDDFSRAVWVYLIKHKSEAGDCLMAFHKMVKTQFGKDIKRIRS 196

Query: 1546 DXXXXXXXXXXXXFLQSKGVIHQTSCPYKPQQNGRAERKHKHLLEMARSIYFQAHFPIHF 1367
            D            F   +G++ +T+CP+ PQQNG  ERKH+HLLEMAR++ FQA  P  F
Sbjct: 197  DNGGEFVSNRMTNFYTEEGILLETTCPHTPQQNGVVERKHRHLLEMARALMFQASLPKRF 256

Query: 1366 WGYCILASTYIINRLPSRVLDNKSXXXXXXXXXXXXXXLRVIGCQAH--TYTHNKDKFGP 1193
            WG CI  + YIINRLPS+V+ NK+              LRV+GC A+  +   N DKF  
Sbjct: 257  WGECIQTACYIINRLPSKVIGNKTPYEIVFRKKPDYDRLRVMGCLAYYRSIETNGDKFEF 316

Query: 1192 KSTPTVLLGYPHNQKGYLLYDPHTHKTIISRNV 1094
            +  P V LGYP   KGY ++D    K  +SR+V
Sbjct: 317  RGRPGVFLGYPQGTKGYKIFDVEHGKIAVSRDV 349


>gb|PKI78362.1| hypothetical protein CRG98_001305 [Punica granatum]
          Length = 628

 Score =  265 bits (677), Expect = 2e-76
 Identities = 123/229 (53%), Positives = 168/229 (73%)
 Frame = -1

Query: 687  NFINYRNLSQSNLHFINTVTSISEPHSYLQASKDPRWQEAMTKEIQALEQNNTWVYTTLP 508
            ++++Y +L  + L F+  + S +EP +Y QA+KD +W+ AM++EI+ALE N TW   +LP
Sbjct: 335  HYLDYSDLDATQLSFLAAIDSDTEPKTYTQAAKDSKWRHAMSEEIRALEDNGTWTIQSLP 394

Query: 507  PGKSPIGSKWVYRIKLNANGSIERYKARLVAKGYNQREGIDFKETFAPVAKMVTVRCLLS 328
            P K PIG KWV++IK  A+G++ERYKARLVAKG+ Q EG+DF ETFAPVAK+VTVRCLL+
Sbjct: 395  PEKKPIGCKWVFKIKRRADGTVERYKARLVAKGFTQVEGVDFHETFAPVAKLVTVRCLLT 454

Query: 327  IAVKNNWYMEQLDINNAFLHGDLHEEVYMIVPQGYSKTLPPNTVCKLTKSLYGLKQANRQ 148
            +A+   W + QLD+NNAFLHGDL EEVYM +P G+   + P+ VC L KSLYGL+QA+R 
Sbjct: 455  VAIAKQWELHQLDVNNAFLHGDLDEEVYMSLPPGFRSDI-PHPVCCLRKSLYGLRQASRN 513

Query: 147  WFEKLTTFLKGLGFKQSYVDTSLLTIKYNGTITSLLVYVDDILLVSKDA 1
            W+ K    L   GF QS  D SL T  ++G   ++LVYVDD++LV+ D+
Sbjct: 514  WYSKFAAALITYGFHQSQADHSLFTFSHHGVFLAVLVYVDDMILVTNDS 562



 Score =  126 bits (316), Expect = 1e-26
 Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
 Frame = -3

Query: 1492 GVIHQTSCPYKPQQNGRAERKHKHLLEMARSIYFQAHFPIHFWGYCILASTYIINRLPSR 1313
            G+IHQTSC   PQQNGR ERKH+H+L +AR++ FQA  P+ FWG CI A+ ++IN  PS 
Sbjct: 13   GIIHQTSCIDTPQQNGRVERKHRHILNVARALMFQASLPLAFWGECISAAAHLINLTPSS 72

Query: 1312 VLDNKSXXXXXXXXXXXXXXLRVIG--CQAHTYTHNKDKFGPKSTPTVLLGYPHNQKGYL 1139
            +L  K+              +RV G  C AH+    KDKFG +S   + +GYP  +KG+ 
Sbjct: 73   ILSGKTPFELLFRQKPDYHHIRVFGCLCYAHSSPRFKDKFGQRSRKCIFIGYPFGKKGWK 132

Query: 1138 LYDPHTHKTIISRNV 1094
            +YD  T +  +SR+V
Sbjct: 133  VYDLETREVFVSRDV 147