BLASTX nr result

ID: Chrysanthemum22_contig00000511 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00000511
         (414 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023741015.1| 30S ribosomal protein S21, chloroplastic [La...    72   4e-13
gb|KVI09217.1| Ribosomal protein S21 [Cynara cardunculus var. sc...    70   3e-12
ref|XP_021973485.1| 30S ribosomal protein S21, chloroplastic-lik...    65   2e-10
ref|XP_022005581.1| 30S ribosomal protein S21, chloroplastic-lik...    64   1e-09

>ref|XP_023741015.1| 30S ribosomal protein S21, chloroplastic [Lactuca sativa]
 gb|PLY96781.1| hypothetical protein LSAT_2X94161 [Lactuca sativa]
          Length = 176

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = -1

Query: 348 TPFRNPNDDKVEGVNKKREDDNDNWEMPNDSPLN 247
           TPFRNPNDDKVE VNKKREDD+DNW+MP+DSPLN
Sbjct: 143 TPFRNPNDDKVESVNKKREDDDDNWDMPSDSPLN 176


>gb|KVI09217.1| Ribosomal protein S21 [Cynara cardunculus var. scolymus]
          Length = 177

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 28/34 (82%), Positives = 34/34 (100%)
 Frame = -1

Query: 348 TPFRNPNDDKVEGVNKKREDDNDNWEMPNDSPLN 247
           TPFRNPND+K+EGV+KKREDD+DNW+MP+DSPLN
Sbjct: 144 TPFRNPNDEKLEGVSKKREDDDDNWDMPSDSPLN 177


>ref|XP_021973485.1| 30S ribosomal protein S21, chloroplastic-like [Helianthus annuus]
 gb|OTG20905.1| putative ribosomal protein S21 [Helianthus annuus]
          Length = 167

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = -1

Query: 345 PFRNPNDDKVEGVNKKREDDNDNWEMPNDSPLN 247
           PFRN NDDK E VNKKR+DDNDNWEMP DSPLN
Sbjct: 135 PFRNFNDDKAETVNKKRDDDNDNWEMPEDSPLN 167


>ref|XP_022005581.1| 30S ribosomal protein S21, chloroplastic-like [Helianthus annuus]
 gb|OTF98898.1| putative ribosomal protein S21 family protein [Helianthus annuus]
          Length = 179

 Score = 63.5 bits (153), Expect = 1e-09
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = -1

Query: 345 PFRNPNDDKVEGVNKKREDDNDNWEMPNDSPLN 247
           PFRN ND+K E VNKK++DDNDNWEMP DSPLN
Sbjct: 147 PFRNFNDEKTESVNKKKDDDNDNWEMPEDSPLN 179


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