BLASTX nr result

ID: Chrysanthemum22_contig00000397 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00000397
         (380 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023756422.1| zinc finger CCCH domain-containing protein 3...    64   3e-09
ref|XP_017244366.1| PREDICTED: zinc finger CCCH domain-containin...    55   2e-06

>ref|XP_023756422.1| zinc finger CCCH domain-containing protein 3-like [Lactuca sativa]
 gb|PLY90959.1| hypothetical protein LSAT_9X106160 [Lactuca sativa]
          Length = 418

 Score = 63.9 bits (154), Expect = 3e-09
 Identities = 43/92 (46%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
 Frame = -1

Query: 380 GICKFGPTCKYDHPLMGYSYNYGXXXXXXXXXXXXSVFPYGG----TFHXXXXXXXXXXK 213
           GICKFGPTCKYDHPLMGYSYNY             S+FPYGG    T H          K
Sbjct: 328 GICKFGPTCKYDHPLMGYSYNYS-MSLPNPPILDPSLFPYGGVNSSTLHSSGSSPSKSSK 386

Query: 212 YAGAKT---XXXXXXXXXXXXXQHGASPSHSE 126
             GAKT                Q  ASPSHSE
Sbjct: 387 NEGAKTPAGPSPSPSPSPSPSPQRVASPSHSE 418


>ref|XP_017244366.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           [Daucus carota subsp. sativus]
          Length = 419

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = -1

Query: 380 GICKFGPTCKYDHPLMGYSYNYG 312
           G+CKFGPTCK+DHPL+GYSYNYG
Sbjct: 320 GLCKFGPTCKFDHPLVGYSYNYG 342


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