BLASTX nr result

ID: Chrysanthemum22_contig00000001 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00000001
         (1249 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY90785.1| hypothetical protein LSAT_1X47781 [Lactuca sativa]     108   1e-22

>gb|PLY90785.1| hypothetical protein LSAT_1X47781 [Lactuca sativa]
          Length = 336

 Score =  108 bits (269), Expect = 1e-22
 Identities = 80/177 (45%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
 Frame = -3

Query: 1247 IV*EIQW-AVVVDIHSKVTKPGPKQTGHPLVDPKCSNRVTTMCNLVPTLVNPLSTPNNHM 1071
            IV E QW AV  DIHSK TK  P+QT  P   PKC+N+    CN V TLV+PL+TPN + 
Sbjct: 9    IVRETQWVAVEEDIHSKATKLDPRQTPGPHPHPKCNNKAMVTCNQVHTLVSPLNTPNPNT 68

Query: 1070 VAILASKPQVDMLLVGTSQQLELLQHSKPLREVVLMIITISNKLHKPNRLVA--LRQMHL 897
             A L    Q DM   G+S    + +    L  +V+MI T SNKL K N L A   +Q  L
Sbjct: 69   AATLV---QPDMPPAGSS---PVRKPHWELLLLVVMITTTSNKLPKANHLAAPWRQQTGL 122

Query: 896  LMGTVSKVKLMVKMGMEDMEHLNLVMVDMINKVMLILILQVDIIMLLAKQLMVKLAH 726
            + GTV++VK+ VKMGM    +L ++  D INK M  +I Q+DI+    K +MVK+ H
Sbjct: 123  VTGTVNRVKVTVKMGMVGTHNL-VMRKDTINKGM--VIQQLDIM----KHMMVKMVH 172


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