BLASTX nr result

ID: Chrysanthemum21_contig00050593 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00050593
         (375 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024009945.1| LOW QUALITY PROTEIN: EMBRYO SURROUNDING FACT...    53   4e-06

>ref|XP_024009945.1| LOW QUALITY PROTEIN: EMBRYO SURROUNDING FACTOR 1-like protein 8
           [Eutrema salsugineum]
          Length = 128

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
 Frame = +1

Query: 46  MVKLNGYVIMIFCVSFLVLLVCHECSKIDVNEIKS-IASRGPCAMVQCTPYEKNLFCCC- 219
           ++K N  VI IFC+  + L   HEC      E KS +A R PC  V C   + N  C C 
Sbjct: 48  IIKRNNVVIAIFCIILIALFPLHECENSQTLEAKSNVAKRPPCISVNCDAKDNNRTCACC 107

Query: 220 --RDFNLCLSNAREC 258
             +  N C ++  EC
Sbjct: 108 ISKXGNRCYNSKTEC 122


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