BLASTX nr result

ID: Chrysanthemum21_contig00050379 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00050379
         (360 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY78700.1| hypothetical protein LSAT_9X46760 [Lactuca sativa]      70   1e-13

>gb|PLY78700.1| hypothetical protein LSAT_9X46760 [Lactuca sativa]
          Length = 84

 Score = 70.5 bits (171), Expect = 1e-13
 Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
 Frame = +2

Query: 26  MHLIKFIVVLVIITTFSS--SPVASRGIGINWDGKKFCTEMTCDPLNESSTIQCDNTCIP 199
           M+ +KF ++L+I+T  S+  +  A++G+  NWDG+KFC+ M C     +    C   CIP
Sbjct: 1   MNQMKFFILLLILTITSAWATKEATKGLVPNWDGRKFCSTMVCK--MGTGDAFCTEDCIP 58

Query: 200 RGWKVGECISPPD-SSAAGHCCCYTP 274
           RGW  G+C   P  +   G+CCC+TP
Sbjct: 59  RGWTNGQCDHLPGITGDTGNCCCWTP 84


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