BLASTX nr result

ID: Chrysanthemum21_contig00050303 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00050303
         (806 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022002229.1| putative F-box/FBD/LRR-repeat protein At5g22...   118   3e-26
gb|KVH91389.1| F-box domain, cyclin-like protein [Cynara cardunc...    69   9e-10
ref|XP_023756687.1| putative F-box/FBD/LRR-repeat protein At4g03...    64   7e-08
ref|XP_022004557.1| putative F-box/LRR-repeat protein At3g28410 ...    62   3e-07

>ref|XP_022002229.1| putative F-box/FBD/LRR-repeat protein At5g22610 [Helianthus annuus]
          Length = 682

 Score =  118 bits (295), Expect = 3e-26
 Identities = 64/134 (47%), Positives = 91/134 (67%), Gaps = 7/134 (5%)
 Frame = -3

Query: 609 EERIQAQDEVITEQKSI-------NEKLLSHMIKCRMEQLKLQVESGNPDYQVIRSIGCE 451
           E ++Q QD+VI + K+         EKL S +IKC+M +LK QVESGNPDY+VIR +G +
Sbjct: 522 EAKMQTQDQVIAKLKARLAAESLQYEKLTSQIIKCKMAELKAQVESGNPDYEVIRLVGRD 581

Query: 450 IKSALNLIPESMRVDMKVRFLFQYKELKSLILTQIDGSQWAKIESQLGLKRNVERPLHSN 271
           ++SA++L+P+S+R   +  F FQY+ LK  +LT++D SQW +IE+ LG  R  ER   S+
Sbjct: 582 VESAMDLMPQSLRARAETEFSFQYEMLKCRLLTRVDASQWERIETGLGNIRLSER-FSSS 640

Query: 270 NIHSLPEVRAAELP 229
           + HS   V AAELP
Sbjct: 641 HSHSQSHVHAAELP 654



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 63/170 (37%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
 Frame = -3

Query: 804 CPFNNLKYLKIDTT--RLKEKDPIPTQPIQVKDYLLENSPNATFIMDLPQ----RPLEQL 643
           CPF+NLK LKI+TT  +LK++D IPT P QV+ Y LENSPNATFIMDLPQ    R  +Q+
Sbjct: 327 CPFDNLKCLKINTTPTQLKQRDCIPTIPTQVRKYFLENSPNATFIMDLPQVPQKRSRQQV 386

Query: 642 YYKPKSKVARLEERIQAQDEVITEQKSINEKLLSHMIKCRMEQLKLQVESGNPDYQVIRS 463
              P +KVA+LE   +       E               RM++ K Q +      Q  R 
Sbjct: 387 DSDPVTKVAKLEAENKLPQTTAEE--------------TRMQEAKTQWQDQLTAQQKAR- 431

Query: 462 IGCEIKSALNLIPESMRVDMKVRFLFQYKELKSLILTQIDGSQWAKIESQ 313
               ++S +N   ++  + MK + L   ++ K   L Q++  Q  KI  Q
Sbjct: 432 --IPMQSQVN-GQQTENIRMKYQQLIAKRKEKFQKLVQLNEYQMKKIRMQ 478


>gb|KVH91389.1| F-box domain, cyclin-like protein [Cynara cardunculus var.
           scolymus]
          Length = 400

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 32/48 (66%), Positives = 37/48 (77%)
 Frame = -3

Query: 804 CPFNNLKYLKIDTTRLKEKDPIPTQPIQVKDYLLENSPNATFIMDLPQ 661
           CPFNNLK LKID   LK+KD IPT PIQ  +Y LE+SP+  FIMD+PQ
Sbjct: 329 CPFNNLKCLKIDKPPLKQKDHIPTMPIQFINYFLESSPSVPFIMDIPQ 376


>ref|XP_023756687.1| putative F-box/FBD/LRR-repeat protein At4g03220 [Lactuca sativa]
          Length = 530

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 47/160 (29%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
 Frame = -3

Query: 801 PFNNLKYLKIDTTRLKEKDPIPTQPIQVKDYLLENSPNATFIMDLPQRPLEQLYYKPKSK 622
           PF+NL  L ID++R  +   +     +V+++LLENSP A F M+LP+ P  +     K K
Sbjct: 338 PFSNLNCLTIDSSRRSDAYKVKMST-EVRNFLLENSPKAIFTMELPEEPPTKAM---KQK 393

Query: 621 VARLEERIQAQDEVITEQKSINEKL-LSHMIKCRMEQLKLQVESGNPDYQVIRSIGCEIK 445
            AR++ + +   E+ ++ K +   +   +MI  + E+ K   +    +   I S   +I+
Sbjct: 394 EARVKRKAKLAAEIESDMKDLQGSIEQGNMIVDQKEKAKAAFD----NIISISSKKSQIR 449

Query: 444 SALNLIPESMRVDMKVRFLFQYKE---LKSLILTQIDGSQ 334
           S L  +P+  RV+++ RF  Q +E   L+  +L++I  S+
Sbjct: 450 SLLEKLPKRDRVELEARFSLQLEEEEALRGRLLSEIVNSE 489


>ref|XP_022004557.1| putative F-box/LRR-repeat protein At3g28410 [Helianthus annuus]
          Length = 418

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = -3

Query: 804 CPFNNLKYLKIDTTRLKEKDPIPTQPIQVKDYLLENSPNATFIMDLPQRP 655
           CPF+NLK L+I     K+ D IP  P QV+ Y LENSP+AT IM+LPQ P
Sbjct: 332 CPFDNLKCLEISMVSQKQNDHIPRVPTQVRSYFLENSPSATVIMNLPQVP 381


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