BLASTX nr result

ID: Chrysanthemum21_contig00050292 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00050292
         (436 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023742729.1| uncharacterized protein LOC111890889 [Lactuc...    57   3e-07
ref|XP_023742728.1| F-box protein CPR1-like [Lactuca sativa]           57   1e-06
ref|XP_023769587.1| F-box protein CPR1-like [Lactuca sativa]           57   2e-06
gb|PLY66966.1| hypothetical protein LSAT_6X57501 [Lactuca sativa]      55   4e-06
ref|XP_023769588.1| F-box protein CPR1-like [Lactuca sativa]           55   7e-06
ref|XP_023773236.1| F-box/kelch-repeat protein At3g06240-like [L...    55   7e-06

>ref|XP_023742729.1| uncharacterized protein LOC111890889 [Lactuca sativa]
          Length = 164

 Score = 57.0 bits (136), Expect = 3e-07
 Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
 Frame = -1

Query: 325 EYLDAPIFVPSLVSPIVNARPKRKRQAKNSKKNVKFIKED--LSGPSG 188
           EY+ API++ SLVSP VN RPKRK Q  NSKK+ K IK D  L G SG
Sbjct: 117 EYICAPIYMESLVSPYVNGRPKRKTQESNSKKSCKLIKRDPMLPGASG 164


>ref|XP_023742728.1| F-box protein CPR1-like [Lactuca sativa]
          Length = 358

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
 Frame = -1

Query: 325 EYLDAPIFVPSLVSPIVNARPKRKRQAKNSKKNVKFIKED--LSGPSG 188
           EY+ API++ SLVSP VN RPKRK Q  NSKK+ K IK D  L G SG
Sbjct: 311 EYICAPIYMESLVSPYVNGRPKRKTQESNSKKSCKLIKRDPMLPGASG 358


>ref|XP_023769587.1| F-box protein CPR1-like [Lactuca sativa]
          Length = 358

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
 Frame = -1

Query: 328 EEYLDAPIFVPSLVSPIVNARPKRKRQAKNSKKNVKFIKED--LSGPSG 188
           +EY+ API++ SLVSP VN RPKRK Q  NSKK+ K IK D  L G SG
Sbjct: 310 KEYICAPIYMESLVSPYVNGRPKRKIQESNSKKSCKLIKRDPMLPGASG 358


>gb|PLY66966.1| hypothetical protein LSAT_6X57501 [Lactuca sativa]
          Length = 314

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
 Frame = -1

Query: 325 EYLDAPIFVPSLVSPIVNARPKRKRQAKNSKKNVKFIKED--LSGPSG 188
           EY+ API++ SLVSP VN RPKRK Q  NSK++ K IK D  L G SG
Sbjct: 267 EYICAPIYMESLVSPYVNGRPKRKTQESNSKESCKLIKRDPMLPGASG 314


>ref|XP_023769588.1| F-box protein CPR1-like [Lactuca sativa]
          Length = 358

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = -1

Query: 328 EEYLDAPIFVPSLVSPIVNARPKRKRQAKNSKKNVKFIKED 206
           +EY+ API++ SLVSP VN RPKRK Q  NSKK+ K IK D
Sbjct: 310 KEYICAPIYMESLVSPYVNGRPKRKIQESNSKKSCKLIKRD 350


>ref|XP_023773236.1| F-box/kelch-repeat protein At3g06240-like [Lactuca sativa]
 gb|PLY78217.1| hypothetical protein LSAT_6X57400 [Lactuca sativa]
          Length = 358

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
 Frame = -1

Query: 421 RSVAHYLRRLKVYNRVTKSYFQDDTKLSRTGEEYLDAPIFVPSLVSPIVNARPKRKRQAK 242
           R V H L+ LK Y R  KS+++D         +++ API+V +LVSP VN  P +KR   
Sbjct: 279 RVVLHSLKTLKHYIRYKKSWYRDIFLFRN--RDFIGAPIYVETLVSPYVNGSPMKKRHLG 336

Query: 241 NSKKNVKFIKED--LSGPS 191
           + KK  K +K D  ++GPS
Sbjct: 337 DIKKRCKLLKGDPSVAGPS 355


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