BLASTX nr result
ID: Chrysanthemum21_contig00050174
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Chrysanthemum21_contig00050174 (510 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|KVI03570.1| Pentatricopeptide repeat-containing protein [Cyna... 61 1e-07 ref|XP_023772360.1| pentatricopeptide repeat-containing protein ... 59 5e-07 ref|XP_022010152.1| pentatricopeptide repeat-containing protein ... 56 6e-06 >gb|KVI03570.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus var. scolymus] Length = 481 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 2/47 (4%) Frame = +1 Query: 1 TLAITHRLDLLSCVLDFIISNPCPFSNCIFSCSALHP--SFSLPSIC 135 TLAITHRLD LS VLDFI+SNPCP S+ IFSCS P F++ S C Sbjct: 117 TLAITHRLDSLSPVLDFIVSNPCPCSDGIFSCSRTEPIFRFAINSFC 163 >ref|XP_023772360.1| pentatricopeptide repeat-containing protein At2g36240 [Lactuca sativa] gb|PLY78874.1| hypothetical protein LSAT_5X164841 [Lactuca sativa] Length = 482 Score = 58.9 bits (141), Expect = 5e-07 Identities = 28/39 (71%), Positives = 31/39 (79%) Frame = +1 Query: 1 TLAITHRLDLLSCVLDFIISNPCPFSNCIFSCSALHPSF 117 TLAITHRLD LS +LDFI+SNPCP S+ IFSCS P F Sbjct: 115 TLAITHRLDSLSPLLDFIVSNPCPCSDGIFSCSRTEPIF 153 >ref|XP_022010152.1| pentatricopeptide repeat-containing protein At2g36240 [Helianthus annuus] ref|XP_022010156.1| pentatricopeptide repeat-containing protein At2g36240 [Helianthus annuus] gb|OTG33252.1| putative pentatricopeptide (PPR) repeat-containing protein [Helianthus annuus] Length = 481 Score = 55.8 bits (133), Expect = 6e-06 Identities = 26/39 (66%), Positives = 30/39 (76%) Frame = +1 Query: 1 TLAITHRLDLLSCVLDFIISNPCPFSNCIFSCSALHPSF 117 TLAITHRLD L V+DFI+SNPCP S+ IFSC+ P F Sbjct: 117 TLAITHRLDPLLSVVDFIVSNPCPCSDGIFSCNRTEPIF 155