BLASTX nr result

ID: Chrysanthemum21_contig00049961 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00049961
         (419 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023763448.1| uncharacterized protein LOC111911921 [Lactuc...   100   6e-22
gb|KVI00961.1| Bromodomain-containing protein, partial [Cynara c...    64   4e-09

>ref|XP_023763448.1| uncharacterized protein LOC111911921 [Lactuca sativa]
 gb|PLY85758.1| hypothetical protein LSAT_1X41861 [Lactuca sativa]
          Length = 470

 Score =  100 bits (248), Expect = 6e-22
 Identities = 55/112 (49%), Positives = 66/112 (58%)
 Frame = +1

Query: 67  FPSMSSLPVRPRSIRPRAPSKQPRLVVKFPSSGPMAVPHGYMKXXXXXXXXXXXPETEGI 246
           F S+SS PVRPRS+RPRAP KQP+LVVKFPSSGP+  PHGY+K           PE EG 
Sbjct: 362 FSSISSPPVRPRSVRPRAPCKQPKLVVKFPSSGPIGGPHGYLKVSSNSDSGTLNPEIEG- 420

Query: 247 KKVSTDFLGAADPKAAKKXXXXXXXXXXXXXXXSKQPPLPRNTINRKRAHQK 402
            K + DF G  + K AK+                + PP PRN+ N K+AHQK
Sbjct: 421 SKSNVDFHG--NQKIAKRGLGRPRRVGGGGRGGKQPPPTPRNSSNGKKAHQK 470


>gb|KVI00961.1| Bromodomain-containing protein, partial [Cynara cardunculus var.
           scolymus]
          Length = 381

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 31/43 (72%), Positives = 35/43 (81%)
 Frame = +1

Query: 67  FPSMSSLPVRPRSIRPRAPSKQPRLVVKFPSSGPMAVPHGYMK 195
           F SMSS PVRPRSIR RAPSKQ ++VVKFP+SG M   HGY+K
Sbjct: 311 FSSMSSPPVRPRSIRARAPSKQVKVVVKFPTSGQMVGRHGYLK 353


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