BLASTX nr result

ID: Chrysanthemum21_contig00049870 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00049870
         (443 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH93962.1| hypothetical protein Ccrd_003978 [Cynara carduncu...    53   1e-06

>gb|KVH93962.1| hypothetical protein Ccrd_003978 [Cynara cardunculus var. scolymus]
          Length = 696

 Score = 52.8 bits (125), Expect(2) = 1e-06
 Identities = 27/42 (64%), Positives = 30/42 (71%)
 Frame = +2

Query: 74  GDSIVFYITGTVERMLDSVSETR*IAVGFICRIKLKAVNYLL 199
           G  +VF +T   E M DSVS TR IAVGFIC+IKLK V YLL
Sbjct: 585 GACVVFLLTDIAENMSDSVSGTREIAVGFICQIKLKVVKYLL 626



 Score = 27.3 bits (59), Expect(2) = 1e-06
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 223 KLFIIDLLNKFLKWLFDFEIDQNN 294
           KL ++  L K +K L  FEIDQNN
Sbjct: 618 KLKVVKYLLKCVKRLLQFEIDQNN 641


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