BLASTX nr result

ID: Chrysanthemum21_contig00049629 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00049629
         (391 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTF85741.1| putative formin, FH2 domain-containing protein [H...    96   2e-20
ref|XP_022025440.1| uncharacterized protein LOC110925963 isoform...    96   2e-20
gb|KVH95958.1| Actin-binding FH2 [Cynara cardunculus var. scolymus]    71   1e-11

>gb|OTF85741.1| putative formin, FH2 domain-containing protein [Helianthus annuus]
          Length = 1421

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 9/114 (7%)
 Frame = +2

Query: 2   YYLKEFQQYSISINDFNILSLKSKRPTSHDCIKEE-------SYNGDDHQTTFLRKCHEH 160
           Y L EF+Q +I I++ N+  +  KR T ++C K+E       SY+ D+HQTT  RK  ++
Sbjct: 66  YCLDEFEQNTIPIDECNLHCVNGKRSTYNNCGKDEWQENLSNSYDPDNHQTTSYRKLPDN 125

Query: 161 LQRKACPHPTSSSGH--NHGTAKRPPIRVLLSSPEGLEYSYQRHSRKLADIGSI 316
           LQ++ACP   S  G   +  T KR PIR LLSSPE LE SY R SRKL DIG+I
Sbjct: 126 LQKRACPSAASDHGLACSPSTVKRSPIRALLSSPEELENSYSRPSRKLVDIGAI 179


>ref|XP_022025440.1| uncharacterized protein LOC110925963 isoform X1 [Helianthus annuus]
          Length = 1490

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 9/114 (7%)
 Frame = +2

Query: 2   YYLKEFQQYSISINDFNILSLKSKRPTSHDCIKEE-------SYNGDDHQTTFLRKCHEH 160
           Y L EF+Q +I I++ N+  +  KR T ++C K+E       SY+ D+HQTT  RK  ++
Sbjct: 66  YCLDEFEQNTIPIDECNLHCVNGKRSTYNNCGKDEWQENLSNSYDPDNHQTTSYRKLPDN 125

Query: 161 LQRKACPHPTSSSGH--NHGTAKRPPIRVLLSSPEGLEYSYQRHSRKLADIGSI 316
           LQ++ACP   S  G   +  T KR PIR LLSSPE LE SY R SRKL DIG+I
Sbjct: 126 LQKRACPSAASDHGLACSPSTVKRSPIRALLSSPEELENSYSRPSRKLVDIGAI 179


>gb|KVH95958.1| Actin-binding FH2 [Cynara cardunculus var. scolymus]
          Length = 948

 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 41/88 (46%), Positives = 50/88 (56%), Gaps = 14/88 (15%)
 Frame = +2

Query: 83  SHDCIKE-------ESYNGDDHQTTFLRKCHEHLQRKACPHPTSSSGHNHGT-------A 220
           S+DC KE       +SY  DDH+ TFLRK H+ L R+ CPHP S+S H+ G         
Sbjct: 25  SNDCDKEGWLESLSKSYRSDDHRGTFLRKLHDRLLRRPCPHPMSTS-HSQGNLENSPFMV 83

Query: 221 KRPPIRVLLSSPEGLEYSYQRHSRKLAD 304
           K  PIR LL SP+ L   Y R  RKLA+
Sbjct: 84  KHQPIRALLMSPKDLANPYPRPHRKLAE 111


Top