BLASTX nr result

ID: Chrysanthemum21_contig00049609 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00049609
         (389 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020229634.1| protein LATERAL ROOT PRIMORDIUM 1-like [Caja...    55   5e-06
ref|XP_022007727.1| protein LATERAL ROOT PRIMORDIUM 1-like [Heli...    54   7e-06

>ref|XP_020229634.1| protein LATERAL ROOT PRIMORDIUM 1-like [Cajanus cajan]
          Length = 479

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 43/121 (35%), Positives = 51/121 (42%), Gaps = 34/121 (28%)
 Frame = -1

Query: 389 SGAFADWVXXXXXXXXXXXXXXXXHDLSLGFNGGPSATAQGGGP-TGVWSSAANRHQMNY 213
           SGAFADW                  DLSLGFN GP+A A   GP TG+WS A     +NY
Sbjct: 92  SGAFADWAATASSSGRAD-------DLSLGFNAGPAAAAAATGPATGMWSGAT--RSINY 142

Query: 212 SEMGMF---------------------------------GVGVNIGVGIPLLATTPSWQT 132
            EMGMF                                 GVGV++   IPLLA TP  ++
Sbjct: 143 PEMGMFVVAPASSFHHHHQQIPPPHDPVVADSLNPATALGVGVSV---IPLLAATPCLES 199

Query: 131 E 129
           +
Sbjct: 200 D 200


>ref|XP_022007727.1| protein LATERAL ROOT PRIMORDIUM 1-like [Helianthus annuus]
          Length = 505

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 58/183 (31%), Positives = 67/183 (36%), Gaps = 54/183 (29%)
 Frame = -1

Query: 389 SGAFADWVXXXXXXXXXXXXXXXXHDLSLGFNGGPSATAQGGGPT---GVWSSAANRHQM 219
           SGAFADWV                 DLSLGFN   S    GGG T   G+WSS  +  Q+
Sbjct: 137 SGAFADWVSSSSALRGSDQ------DLSLGFNA--SGGGGGGGTTATAGMWSSTQSARQI 188

Query: 218 NYS--EMGMFGV---------------------GVNIGVGIPLLATTPS----------- 141
           NY   EMGM G+                     G+ +GV IPLL  TP            
Sbjct: 189 NYGIPEMGMLGLRDVFVVADHPHSANVNAATPLGMGVGV-IPLLTATPLEENMLSTRGGG 247

Query: 140 -------------WQTEV----NYLKKPSFSEHVFXXXXXXXXXXXXXXXXXXSLTCQDC 12
                        WQ +     NYL KP   +H F                   +TCQDC
Sbjct: 248 GRGGNTNTSSIQFWQQQQPQAHNYLSKPMI-DHGFLQAGGGSTSTSGST-----MTCQDC 301

Query: 11  GNQ 3
           GNQ
Sbjct: 302 GNQ 304


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