BLASTX nr result

ID: Chrysanthemum21_contig00049398 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00049398
         (501 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH88007.1| Calponin homology domain-containing protein [Cyna...    57   2e-06

>gb|KVH88007.1| Calponin homology domain-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 1298

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
 Frame = +3

Query: 18  RARKEDIKPSPRDS------KPRTPFKKQDILKAFNNVINNXXXXXXXXXXXXXXXXXX- 176
           RAR E+IK SPRD       K R+  KK++ +K    + N+                   
Sbjct: 267 RARNEEIKASPRDRNKEMELKMRSKLKKEEFVKPITMLNNDKEENASSENKTNEETKSFS 326

Query: 177 -IVSEMRKKTNSDIKKPSTDINNDPEKKTTTFSKKFAPDTNNEIEQKPTIS--TKKVAS 344
            I+ EMR+K  ++      DI+N+ EKKT TF+KKF  D NNE  +K   S   +K+AS
Sbjct: 327 EIIKEMRRKAAAN------DISNEMEKKTPTFAKKFPSDINNETPKKAATSDGIEKIAS 379



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/61 (42%), Positives = 40/61 (65%)
 Frame = +3

Query: 177 IVSEMRKKTNSDIKKPSTDINNDPEKKTTTFSKKFAPDTNNEIEQKPTISTKKVASETNS 356
           ++++  KK  ++ KK  +D+ N  EKK TT +KK   D +N++E+KPTI  KK  S+ NS
Sbjct: 509 VLNQAEKKPATEAKKAVSDVPNQVEKKPTTEAKKAVSDVSNQVEKKPTIEAKKSVSDVNS 568

Query: 357 E 359
           E
Sbjct: 569 E 569



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 28/96 (29%), Positives = 49/96 (51%)
 Frame = +3

Query: 177 IVSEMRKKTNSDIKKPSTDINNDPEKKTTTFSKKFAPDTNNEIEQKPTISTKKVASETNS 356
           + +++ KK  ++ KKP +D+ N  EKK  T +KK   D  N++E+KPT   KK  S+ ++
Sbjct: 490 VSNQVEKKPITEAKKPISDVLNQAEKKPATEAKKAVSDVPNQVEKKPTTEAKKAVSDVSN 549

Query: 357 EIGXXXXXXXXXXXXXXHDINKNMEDNVTSDASNAI 464
           ++                D+N   E   T++A  A+
Sbjct: 550 QV---EKKPTIEAKKSVSDVNSETEKKPTTEAKKAV 582


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