BLASTX nr result

ID: Chrysanthemum21_contig00049222 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00049222
         (519 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022017202.1| WD repeat and HMG-box DNA-binding protein 1 ...    88   6e-17
gb|KVI06479.1| Protein of unknown function DUF3639 [Cynara cardu...    60   3e-07

>ref|XP_022017202.1| WD repeat and HMG-box DNA-binding protein 1 [Helianthus annuus]
 gb|OTF90655.1| putative transducin family protein / WD-40 repeat family protein
            [Helianthus annuus]
          Length = 958

 Score = 87.8 bits (216), Expect = 6e-17
 Identities = 49/81 (60%), Positives = 56/81 (69%)
 Frame = -1

Query: 516  KKKAIQEPAKVGKVLEPKEATKPDLKALGNKNVADLKAGEVKQVEVQRSSNPFAKSSKNQ 337
            KKK  +EPAKV  V EPK +TK +   L  KN+     GEVKQVE QRS+NPFAKSS NQ
Sbjct: 883  KKKKTEEPAKVVNVPEPKSSTKSENNGLLKKNI-----GEVKQVEGQRSTNPFAKSSNNQ 937

Query: 336  EKGSLLDSLKMLKKNESPSNK 274
            EK SLLDSLK +KKN+    K
Sbjct: 938  EKTSLLDSLKKMKKNDDGGKK 958


>gb|KVI06479.1| Protein of unknown function DUF3639 [Cynara cardunculus var.
            scolymus]
          Length = 939

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 40/78 (51%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = -1

Query: 519  VKKKAIQEPAKVGKVLEPKEATKPD-LKALGNKNVADLKAGEVKQVEVQRSSNPFAKSSK 343
            VKKK  +E AKV         TKP+  K LG K         + +VE  RSSNPFAKSS 
Sbjct: 877  VKKKTTEEAAKV---------TKPENSKGLGVKK-------NIGEVEFHRSSNPFAKSSA 920

Query: 342  NQEKGSLLDSLKMLKKNE 289
            N E+ SLLDSLK LKKN+
Sbjct: 921  NHERTSLLDSLKKLKKND 938


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