BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00048976
         (652 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013615106.1| PREDICTED: uncharacterized protein LOC106321...   127   3e-30
gb|AAG12527.1|AC015446_8 Hypothetical Protein [Arabidopsis thali...   125   3e-30
ref|XP_019100085.1| PREDICTED: uncharacterized protein LOC104779...   125   6e-30
dbj|BAF23229.2| Os08g0236200 [Oryza sativa Japonica Group]            119   3e-27
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...   119   4e-27
emb|CAE05417.1| OSJNBa0035I04.5 [Oryza sativa Japonica Group] >g...   115   4e-26
emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa]                        115   5e-26
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   115   9e-26
ref|XP_022558128.1| uncharacterized protein LOC106392701 [Brassi...   114   1e-25
ref|XP_021320624.1| uncharacterized protein LOC110437007 [Sorghu...   114   1e-25
gb|PNX92874.1| copia protein [Trifolium pratense]                     114   2e-25
ref|XP_002444393.2| uncharacterized protein LOC8077820 [Sorghum ...   114   2e-25
ref|XP_022557683.1| uncharacterized protein LOC111205763 [Brassi...   113   3e-25
dbj|BAF03924.2| Os01g0146700 [Oryza sativa Japonica Group]            112   5e-25
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...   112   7e-25
ref|XP_010496488.1| PREDICTED: uncharacterized protein LOC104773...   111   1e-24
ref|XP_021747926.1| uncharacterized protein LOC110713790 [Chenop...   111   1e-24
gb|AOG75315.1| integrase [Mirabilis jalapa] >gi|1079708121|gb|AO...   108   2e-24
pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize tr...   110   3e-24
gb|AAA33448.1| reverse transcriptase, partial [Zea mays]              110   3e-24

>ref|XP_013615106.1| PREDICTED: uncharacterized protein LOC106321369 [Brassica oleracea
           var. oleracea]
          Length = 733

 Score =  127 bits (320), Expect = 3e-30
 Identities = 61/119 (51%), Positives = 81/119 (68%), Gaps = 6/119 (5%)
 Frame = +2

Query: 2   FSCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NE 181
           FSC  TSQQ  KSK+MIR++NN IRTLL QA L P++W+EALH++  L+N+ P  AI N+
Sbjct: 453 FSCPHTSQQNGKSKRMIRTINNAIRTLLAQAKLSPSYWVEALHVAVHLINILPSAAIQNQ 512

Query: 182 IPSKKFFNKEPNYSHLRVFGCLYYPHLHTPH------*LAPCIFLGYPAYHRGYQSISL 340
           IP    F + P Y HL VFGCL +P+L+  H         PC+F+GYP+ HRGY+ + L
Sbjct: 513 IPHTVLFQQNPTYHHLLVFGCLCFPNLNYSHLNKLAPRSTPCLFIGYPSQHRGYRCLDL 571


>gb|AAG12527.1|AC015446_8 Hypothetical Protein [Arabidopsis thaliana]
          Length = 471

 Score =  125 bits (315), Expect = 3e-30
 Identities = 63/117 (53%), Positives = 79/117 (67%), Gaps = 4/117 (3%)
 Frame = +2

Query: 2   FSCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NE 181
           FSC  TSQQ  +S++MIR++NN +RT+L QAHLP TFW+EAL+    +LNL P T I N 
Sbjct: 31  FSCPYTSQQNGRSERMIRTINNAVRTMLLQAHLPNTFWVEALNNVVHILNLHPSTLINNR 90

Query: 182 IPSKKFFNKEPNYSHLRVFGCLYYPHLHTPH*L----APCIFLGYPAYHRGYQSISL 340
           IP    FNK P+Y+HLRVFG L YPH +T + L    AP  FLGYP  H GY+   +
Sbjct: 91  IPFSVLFNKTPSYNHLRVFGSLCYPHTNTQNKLEPRSAPSAFLGYPLLHPGYRCFDM 147


>ref|XP_019100085.1| PREDICTED: uncharacterized protein LOC104779870 isoform X1
           [Camelina sativa]
          Length = 533

 Score =  125 bits (315), Expect = 6e-30
 Identities = 61/119 (51%), Positives = 84/119 (70%), Gaps = 6/119 (5%)
 Frame = +2

Query: 2   FSCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NE 181
           FSC  TSQQ  K+++M+R++NN+IR+LL  AH+P  +W+EALH +T +LNL P  AI NE
Sbjct: 193 FSCPHTSQQNGKAERMLRTINNLIRSLLIHAHMPLGYWVEALHTATHILNLLPSAAINNE 252

Query: 182 IPSKKFFNKEPNYSHLRVFGCLYYPHL--HTPH*LAP----CIFLGYPAYHRGYQSISL 340
           +P  + FNK P Y HLRVFG L YP+L   + H LAP    C+FLGYP+  RG++ + +
Sbjct: 253 VPFTRLFNKTPRYDHLRVFGSLCYPNLLATSVHKLAPRSTACVFLGYPSDQRGFRCLDI 311


>dbj|BAF23229.2| Os08g0236200 [Oryza sativa Japonica Group]
          Length = 624

 Score =  119 bits (297), Expect = 3e-27
 Identities = 59/114 (51%), Positives = 82/114 (71%), Gaps = 6/114 (5%)
 Frame = +2

Query: 17  TSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEIPSKK 196
           TS Q  K+++++R++NN IRTLL QA +PP++W EAL  +T LLN  P T++ N IP + 
Sbjct: 213 TSPQNGKAERVLRTINNSIRTLLIQASMPPSYWAEALATATYLLNRRPSTSVRNSIPYQL 272

Query: 197 FFNKEPNYSHLRVFGCLYYPHLH--TPH*L----APCIFLGYPAYHRGYQSISL 340
             NK P+YS+LRVFGCL YP+L   TPH L    APC+FLGYPA H+G++ + +
Sbjct: 273 LHNKLPDYSNLRVFGCLCYPNLSATTPHKLSPRSAPCVFLGYPASHKGFRCLDI 326


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAV24907.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1679

 Score =  119 bits (297), Expect = 4e-27
 Identities = 57/114 (50%), Positives = 78/114 (68%), Gaps = 6/114 (5%)
 Frame = +2

Query: 5    SCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEI 184
            SC  TS Q  K+++++RS+NN++R++LFQA LP +FW+EALH +T L+N  P   +    
Sbjct: 844  SCPHTSPQNGKAERILRSLNNIVRSMLFQAKLPGSFWVEALHTATHLINRHPTKTLDRHT 903

Query: 185  PSKKFFNKEPNYSHLRVFGCLYYPHLH--TPH*LAP----CIFLGYPAYHRGYQ 328
            P    +   P+YSHLRVFGC  YP+L   TPH LAP    C+FLGYP YH+GY+
Sbjct: 904  PHFALYGTHPSYSHLRVFGCKCYPNLSATTPHKLAPRSTMCVFLGYPLYHKGYR 957


>emb|CAE05417.1| OSJNBa0035I04.5 [Oryza sativa Japonica Group]
 emb|CAE05956.3| OSJNBb0088C09.15 [Oryza sativa Japonica Group]
          Length = 1246

 Score =  115 bits (289), Expect = 4e-26
 Identities = 81/200 (40%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
 Frame = +2

Query: 5    SCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEI 184
            SC  TS Q  K+++MIR++NN IRTLL QA +PP++W E L  +T LLN  P +++ N I
Sbjct: 469  SCPYTSPQNGKAERMIRTLNNSIRTLLLQASMPPSYWAEGLATATYLLNRRPSSSVNNSI 528

Query: 185  PSKKFFNKEPNYSHLRVFGCLYYPHLH--TPH*LAP----CIFLGYPAYHRGYQSISLWL 346
            P +    K PNYS LRVFGCL YP+L     H LAP    C+FLGYP+ H+GY  +    
Sbjct: 529  PFQLLHRKIPNYSMLRVFGCLCYPNLSATAAHKLAPYSAACVFLGYPSSHKGYCCL---- 584

Query: 347  H*PNYPTIAWFFGCH------PQQALRDTL*ILTLPFLLNNYNQNHTPPSV--PHAYGHK 502
               N  T      CH            D +   +L FLL    Q+   PSV  P   G +
Sbjct: 585  ---NISTRRIIISCHVIFDETQFPFSGDPVDASSLDFLL----QDAPAPSVIAPSLAGVE 637

Query: 503  RLSLCLAHSPSPTSAYQRTP 562
            +    L H+P P +  QR P
Sbjct: 638  QPH--LPHAPFPVNVEQRLP 655


>emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa]
          Length = 1455

 Score =  115 bits (289), Expect = 5e-26
 Identities = 81/200 (40%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
 Frame = +2

Query: 5    SCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEI 184
            SC  TS Q  K+++MIR++NN IRTLL QA +PP++W E L  +T LLN  P +++ N I
Sbjct: 678  SCPYTSPQNGKAERMIRTLNNSIRTLLLQASMPPSYWAEGLATATYLLNRRPSSSVNNSI 737

Query: 185  PSKKFFNKEPNYSHLRVFGCLYYPHLH--TPH*LAP----CIFLGYPAYHRGYQSISLWL 346
            P +    K PNYS LRVFGCL YP+L     H LAP    C+FLGYP+ H+GY  +    
Sbjct: 738  PFQLLHRKIPNYSMLRVFGCLCYPNLSATAAHKLAPYSAACVFLGYPSSHKGYCCL---- 793

Query: 347  H*PNYPTIAWFFGCH------PQQALRDTL*ILTLPFLLNNYNQNHTPPSV--PHAYGHK 502
               N  T      CH            D +   +L FLL    Q+   PSV  P   G +
Sbjct: 794  ---NISTRRIIISCHVIFDETQFPFSGDPVDASSLDFLL----QDAPAPSVIAPSLAGVE 846

Query: 503  RLSLCLAHSPSPTSAYQRTP 562
            +    L H+P P +  QR P
Sbjct: 847  QPH--LPHAPFPVNVEQRLP 864


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  115 bits (287), Expect = 9e-26
 Identities = 56/116 (48%), Positives = 79/116 (68%), Gaps = 6/116 (5%)
 Frame = +2

Query: 5    SCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEI 184
            SC  TS Q  K+++++RS+NN++R+LLFQA LP TFW+EALH +T L+N  P   + +  
Sbjct: 762  SCPHTSPQNGKAERILRSINNIMRSLLFQASLPGTFWVEALHTATHLINRHPTKMLQHHT 821

Query: 185  PSKKFFNKEPNYSHLRVFGCLYYPHLH--TPH*LAP----CIFLGYPAYHRGYQSI 334
            P    +   P+Y+HLRVFGC  YP+L    PH L+P    CIFLGYP +H+GY+ +
Sbjct: 822  PFFALYGVHPSYAHLRVFGCKCYPNLSATAPHKLSPRSTMCIFLGYPLHHKGYRCL 877


>ref|XP_022558128.1| uncharacterized protein LOC106392701 [Brassica napus]
          Length = 745

 Score =  114 bits (286), Expect = 1e-25
 Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
 Frame = +2

Query: 20  SQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEIPSKKF 199
           SQQ  KS+ MIR++NN + +LLFQ  LPPTFW+EALH++  ++NL P  AI N+IP    
Sbjct: 537 SQQNGKSECMIRTINNAVCSLLFQGQLPPTFWVEALHVAAHIINLLPSKAIQNKIPFTTL 596

Query: 200 FNKEPNYSHLRVFGCLYYPHLH--TPH*LAP----CIFLGYPAYHRGY 325
           F K  +YSHLR FGCL YP+ +  T   L+P    CIFLGYP  HRGY
Sbjct: 597 FQKPVSYSHLRTFGCLCYPNTNHSTTSKLSPRSKKCIFLGYPQNHRGY 644


>ref|XP_021320624.1| uncharacterized protein LOC110437007 [Sorghum bicolor]
          Length = 997

 Score =  114 bits (285), Expect = 1e-25
 Identities = 55/113 (48%), Positives = 75/113 (66%), Gaps = 6/113 (5%)
 Frame = +2

Query: 5    SCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEI 184
            SC  TS Q  K++++IR++NN++R+LLFQA +PP +W+EAL  +T LLN+ P   +    
Sbjct: 806  SCPYTSSQNGKAERVIRTINNVVRSLLFQASVPPAYWVEALSTATMLLNILPTKTLQFNT 865

Query: 185  PSKKFFNKEPNYSHLRVFGCLYYPHLH--TPH*LAP----CIFLGYPAYHRGY 325
            P +  F   P Y HLRVFGC  YP+L   TPH LAP    C+FLGY  +H+GY
Sbjct: 866  PHQALFGSPPTYEHLRVFGCRCYPNLSATTPHKLAPRSSLCVFLGYSPHHKGY 918


>gb|PNX92874.1| copia protein [Trifolium pratense]
          Length = 1424

 Score =  114 bits (285), Expect = 2e-25
 Identities = 56/120 (46%), Positives = 78/120 (65%), Gaps = 7/120 (5%)
 Frame = +2

Query: 2    FSCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NE 181
            FSC  TS Q  K+++ IR++NNMIRTLL  + +PP+FW  AL M+T LLN+ P   + N 
Sbjct: 647  FSCPHTSSQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMATYLLNILPRKNLSNH 706

Query: 182  IPSKKFFNKEPNYSHLRVFGCLYYPHLHT-------PH*LAPCIFLGYPAYHRGYQSISL 340
             P++  ++++P+Y+HLRVFGCL YP   +       P    PC+FLGYP  HRGY+   L
Sbjct: 707  SPTQLLYHRDPSYTHLRVFGCLCYPLFPSTTINKLQPR-STPCVFLGYPTNHRGYKCFDL 765


>ref|XP_002444393.2| uncharacterized protein LOC8077820 [Sorghum bicolor]
          Length = 1442

 Score =  114 bits (285), Expect = 2e-25
 Identities = 56/118 (47%), Positives = 78/118 (66%), Gaps = 6/118 (5%)
 Frame = +2

Query: 5    SCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEI 184
            SC  TS Q  K++++IRS+NN++R+LLFQA +PP++W+EAL  +T LLN+ P   +    
Sbjct: 801  SCPYTSPQNGKAERIIRSINNVVRSLLFQASMPPSYWVEALSTATVLLNILPTKTLEFST 860

Query: 185  PSKKFFNKEPNYSHLRVFGCLYYPHLH--TPH*LAP----CIFLGYPAYHRGYQSISL 340
            P    F+K P Y HLRVFGC  YP+      H LAP    C+FLGY A+H+GY+ + L
Sbjct: 861  PHLALFDKPPTYDHLRVFGCKCYPNTSATASHKLAPRSVQCVFLGYSAHHKGYRCLDL 918


>ref|XP_022557683.1| uncharacterized protein LOC111205763 [Brassica napus]
          Length = 707

 Score =  113 bits (282), Expect = 3e-25
 Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 6/119 (5%)
 Frame = +2

Query: 2   FSCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NE 181
           FSC  TSQQ DK+++MI +VNN IR+LLFQA L P FW EALH++  ++N+ P ++I  +
Sbjct: 505 FSCPHTSQQNDKAERMIITVNNSIRSLLFQAQLSPMFWAEALHVAAHIINILPSSSIERK 564

Query: 182 IPSKKFFNKEPNYSHLRVFGCLYYPHLH--TPH*LA----PCIFLGYPAYHRGYQSISL 340
            P    F   P Y  L VFGC+ +P+++    H L+    PC+FLGYP  HRGY+ ++L
Sbjct: 565 SPHSIMFGVTPTYDKLHVFGCMCFPNVNYSNLHKLSPRSTPCLFLGYPTNHRGYRCLNL 623


>dbj|BAF03924.2| Os01g0146700 [Oryza sativa Japonica Group]
          Length = 725

 Score =  112 bits (281), Expect = 5e-25
 Identities = 53/118 (44%), Positives = 80/118 (67%), Gaps = 6/118 (5%)
 Frame = +2

Query: 5   SCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEI 184
           SC  TSQQ  ++++ +R++NN++R+LLFQA LPP +W+EALH +T L+N  P   + +  
Sbjct: 233 SCPYTSQQNGRAERSLRTLNNILRSLLFQACLPPVYWVEALHTATLLVNRIPTKTLSSST 292

Query: 185 PSKKFFNKEPNYSHLRVFGCLYYPHLHT--PH*LAP----CIFLGYPAYHRGYQSISL 340
           P    ++ +P Y HLRVFGC  YP++ +  PH LAP    C+FLGY + H+GY+ + L
Sbjct: 293 PYFHLYSTQPTYDHLRVFGCACYPNMSSTAPHKLAPRSSLCVFLGYSSEHKGYRCLEL 350


>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 978

 Score =  112 bits (280), Expect = 7e-25
 Identities = 55/108 (50%), Positives = 78/108 (72%), Gaps = 6/108 (5%)
 Frame = +2

Query: 35  KSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEIPSKKFFNKEP 214
           K++ ++R++NN IRTLL QA +PP++W EAL  +T LLN  P T++ N IP +   NK P
Sbjct: 191 KAECVLRTINNSIRTLLIQASMPPSYWAEALATATYLLNRRPSTSVRNSIPFQLLHNKLP 250

Query: 215 NYSHLRVFGCLYYPHLH--TPH*LAP----CIFLGYPAYHRGYQSISL 340
           +YS+LRVFGCL YP+L   TPH L+P    C+FLGYPA H+G++ + +
Sbjct: 251 DYSNLRVFGCLCYPNLSATTPHKLSPRSAACVFLGYPASHKGFRCLDI 298


>ref|XP_010496488.1| PREDICTED: uncharacterized protein LOC104773550 [Camelina sativa]
          Length = 747

 Score =  111 bits (278), Expect = 1e-24
 Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
 Frame = +2

Query: 35  KSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEIPSKKFFNKEP 214
           +++ M+R++NN++RT L QAH+P TFW+EAL  S   LNL P ++I N  P  + FNK  
Sbjct: 580 RAESMLRTINNLLRTFLIQAHMPYTFWVEALLASAHTLNLLPSSSINNLTPFSRLFNKPQ 639

Query: 215 NYSHLRVFGCLYYPHL--HTPH*LAP----CIFLGYPAYHRGYQSISL 340
            Y HLRVF CL YP++    PH LAP    C+FLGYPA HRGY+ + +
Sbjct: 640 TYDHLRVFRCLCYPNVLSTAPHKLAPRSVACVFLGYPANHRGYRCLDI 687


>ref|XP_021747926.1| uncharacterized protein LOC110713790 [Chenopodium quinoa]
          Length = 1192

 Score =  111 bits (278), Expect = 1e-24
 Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 7/116 (6%)
 Frame = +2

Query: 2   FSCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NE 181
           FSC  TS Q  K+++ IR++NNMIRTLL  + +PP+FW  AL M+T L N+ P   +  +
Sbjct: 562 FSCLHTSSQNGKAERKIRTINNMIRTLLAHSSVPPSFWHHALQMATYLHNILPTKLLAYD 621

Query: 182 IPSKKFFNKEPNYSHLRVFGCLYYPHLHT-------PH*LAPCIFLGYPAYHRGYQ 328
            P+K  + ++P+YSHLRVFGCL YP L +       P    PC+FLGYP  HRGY+
Sbjct: 622 SPTKILYQQDPSYSHLRVFGCLCYPLLPSTTINKLQPR-STPCVFLGYPPNHRGYK 676


>gb|AOG75315.1| integrase [Mirabilis jalapa]
 gb|AOW44033.1| integrase [Mirabilis jalapa]
          Length = 368

 Score =  108 bits (271), Expect = 2e-24
 Identities = 55/114 (48%), Positives = 74/114 (64%), Gaps = 7/114 (6%)
 Frame = +2

Query: 5   SCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEI 184
           SC  TSQ   K+++ IR++NN +RTLL Q++LPP+FW+E+L MS  L N+ P T +   +
Sbjct: 125 SCLYTSQPNGKAERTIRTINNTLRTLLIQSNLPPSFWVESLIMSAHLFNITPTTTLGKRV 184

Query: 185 PSKKFFNKEPNYSHLRVFGCLYYPHLHTP---H*L----APCIFLGYPAYHRGY 325
           P +  F   P Y HLR+FGCL YP+L TP   H L     PC+FLGYP   +GY
Sbjct: 185 PHELLFGSLPTYDHLRIFGCLCYPNL-TPMISHKLEPRSTPCVFLGYPPTQKGY 237


>pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize transposon
           (fragment)
          Length = 699

 Score =  110 bits (275), Expect = 3e-24
 Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
 Frame = +2

Query: 5   SCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEI 184
           SC  TS Q  ++++MIR+  NMIR LLFQA LP T+W EALH +T LLN  P  A+ +  
Sbjct: 25  SCPYTSAQNGRAERMIRTTTNMIRCLLFQASLPATYWAEALHTATHLLNRLPSKAVSHPT 84

Query: 185 PSKKFFNKEPNYSHLRVFGCLYYPHLH--TPH*LAP----CIFLGYPAYHRGYQSISLWL 346
           P    +   P+Y HLRVFGC  YP+     PH L+P    C+FLGY   H+GY+ + L  
Sbjct: 85  PHFALYGTTPSYDHLRVFGCACYPNTSATAPHKLSPRSTRCLFLGYSPDHKGYRCLDLTS 144

Query: 347 H 349
           H
Sbjct: 145 H 145


>gb|AAA33448.1| reverse transcriptase, partial [Zea mays]
          Length = 700

 Score =  110 bits (275), Expect = 3e-24
 Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
 Frame = +2

Query: 5   SCRKTSQQIDKSKKMIRSVNNMIRTLLFQAHLPPTFWLEALHMST*LLNLFPFTAI*NEI 184
           SC  TS Q  ++++MIR+  NMIR LLFQA LP T+W EALH +T LLN  P  A+ +  
Sbjct: 25  SCPYTSAQNGRAERMIRTTTNMIRCLLFQASLPATYWAEALHTATHLLNRLPSKAVSHPT 84

Query: 185 PSKKFFNKEPNYSHLRVFGCLYYPHLH--TPH*LAP----CIFLGYPAYHRGYQSISLWL 346
           P    +   P+Y HLRVFGC  YP+     PH L+P    C+FLGY   H+GY+ + L  
Sbjct: 85  PHFALYGTTPSYDHLRVFGCACYPNTSATAPHKLSPRSTRCLFLGYSPDHKGYRCLDLTS 144

Query: 347 H 349
           H
Sbjct: 145 H 145