BLASTX nr result

ID: Chrysanthemum21_contig00048805 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00048805
         (378 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023733871.1| glycine-rich protein DOT1-like [Lactuca sati...    59   2e-08
ref|XP_023733875.1| putative glycine-rich cell wall structural p...    57   2e-07
ref|XP_022037614.1| putative glycine-rich cell wall structural p...    54   2e-06

>ref|XP_023733871.1| glycine-rich protein DOT1-like [Lactuca sativa]
 gb|PLY73773.1| hypothetical protein LSAT_8X64320 [Lactuca sativa]
          Length = 151

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = -3

Query: 334 MTKLRALSLASLLVFSTLVMVSESRVARKDLGLNL 230
           M+K++AL+LASLLVFSTLVM SESRVARKDLGLNL
Sbjct: 1   MSKMKALNLASLLVFSTLVMFSESRVARKDLGLNL 35


>ref|XP_023733875.1| putative glycine-rich cell wall structural protein 1 [Lactuca
           sativa]
          Length = 154

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = -3

Query: 334 MTKLRALSLASLLVFSTLVMVSESRVARKDLGLNL 230
           M K++A+SLASLLV STLVMVSESRVARKDLGL+L
Sbjct: 1   MAKMKAMSLASLLVLSTLVMVSESRVARKDLGLDL 35


>ref|XP_022037614.1| putative glycine-rich cell wall structural protein 1 [Helianthus
           annuus]
          Length = 155

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = -3

Query: 334 MTKLRALSLASLLVFSTLVMVSESRVARKDLGLNL 230
           M KLRALSLAS+L+ STLVM+ ESRVARKDLGL+L
Sbjct: 1   MGKLRALSLASMLIVSTLVMMCESRVARKDLGLDL 35


Top