BLASTX nr result

ID: Chrysanthemum21_contig00048802 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00048802
         (426 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022026834.1| AUGMIN subunit 8-like [Helianthus annuus] >g...    82   2e-15
ref|XP_023752377.1| AUGMIN subunit 8-like [Lactuca sativa]             68   2e-10
gb|KVH87555.1| Protein of unknown function DUF566 [Cynara cardun...    57   9e-07

>ref|XP_022026834.1| AUGMIN subunit 8-like [Helianthus annuus]
 gb|OTG30528.1| putative QWRF family [Helianthus annuus]
          Length = 638

 Score = 82.4 bits (202), Expect = 2e-15
 Identities = 50/120 (41%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
 Frame = -2

Query: 407 MDERESDRVSENSKHGNDGTSRHGKSKSSWGLSSXXXXXXXXXXXAKKVVNNRLTDSLWH 228
           MD +E+ R S N    N+GT RHG+S+S WGLS+           AKKV+NNR TDSLWH
Sbjct: 1   MDAQENPRPSSNVGESNEGTHRHGRSRSGWGLSTAVHAVHGVGFVAKKVINNRYTDSLWH 60

Query: 227 GHSRKST----------HEKDNHYHETDAYHHASKTSSNAIHEHNAKLPISSKDTHERND 78
                S+           +++NH HET A HH+S+ S N   E N       + THER D
Sbjct: 61  TRKSSSSASGPSDGSSDAKRENHSHET-ASHHSSQPSLNV--EEN------EQPTHERED 111


>ref|XP_023752377.1| AUGMIN subunit 8-like [Lactuca sativa]
          Length = 683

 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 46/115 (40%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
 Frame = -2

Query: 380 SENSKHGNDGTSRH------GKSKSSWGLSSXXXXXXXXXXXAKKVVNNRLTDSLW---H 228
           SEN K  N+G+SRH      GKS+S WGLS+           AKK+VNNR+TDSLW    
Sbjct: 6   SENPKESNEGSSRHSKDSHHGKSRSHWGLST---TVHGVGFVAKKMVNNRVTDSLWSLKR 62

Query: 227 GHSRKSTHE-------KDNHYHETDAYHHASKTSSNAIHEHNAKLPISSKDTHER 84
             +  STH+       K  +    +     SK S N   E   K  +SSK THER
Sbjct: 63  SSNSSSTHDTSSIPNAKKENLSNENLSDQTSKPSLNVADEQTTKSDVSSKPTHER 117


>gb|KVH87555.1| Protein of unknown function DUF566 [Cynara cardunculus var.
           scolymus]
          Length = 884

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
 Frame = -2

Query: 395 ESDRVSENSKHGNDGTS--RHGKSKSSWGLSSXXXXXXXXXXXAKKVVNNRLTDSLWHGH 222
           E+  VS ++ H +  +   RH    S WGL +            +KV++NRLT+SLW   
Sbjct: 41  ETSAVSSSTPHRSVSSEKRRHATLPSPWGLPTAAVHGVGAVA--RKVISNRLTESLWPSR 98

Query: 221 -SRKSTH-----------EKDNHYHETDAYHHASKTSSNAIHEHNAKLPISSKDTHER 84
            S  S+H           ++DN  +E+ +  H SKTS N  +E  AKLP+SSK T ER
Sbjct: 99  RSSSSSHLQSDASSIPNAKRDNFSNESLS-DHTSKTSLNVANEKTAKLPVSSKPTPER 155


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