BLASTX nr result

ID: Chrysanthemum21_contig00048757 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00048757
         (459 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY84938.1| hypothetical protein LSAT_6X11260 [Lactuca sativa]      75   9e-15
gb|KVH89962.1| hypothetical protein Ccrd_008043 [Cynara carduncu...    66   4e-11
gb|KJB54880.1| hypothetical protein B456_009G052600 [Gossypium r...    54   3e-06

>gb|PLY84938.1| hypothetical protein LSAT_6X11260 [Lactuca sativa]
          Length = 109

 Score = 75.5 bits (184), Expect = 9e-15
 Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
 Frame = +2

Query: 218 GNWQIHSRSRSMRVGRSYSQKESNSES---EP-KWIRFWXXXXXXXXXXXXXXXXX---- 373
           G+WQ  SRSRS+R+G++YS+KES+S+S   EP  W+ FW                     
Sbjct: 5   GSWQ-KSRSRSLRLGQNYSRKESSSQSSQPEPITWLSFWRKIVVRKNVDTKKKKKNKGKI 63

Query: 374 -CFVYSYDENEYMQNFDEGSEMGNTDLLC 457
            C+VYSYD ++YM+NFDEGS   NTDLLC
Sbjct: 64  TCYVYSYDRDDYMRNFDEGSVRENTDLLC 92


>gb|KVH89962.1| hypothetical protein Ccrd_008043 [Cynara cardunculus var. scolymus]
          Length = 98

 Score = 65.9 bits (159), Expect = 4e-11
 Identities = 37/83 (44%), Positives = 46/83 (55%)
 Frame = +2

Query: 209 MEIGNWQIHSRSRSMRVGRSYSQKESNSESEPKWIRFWXXXXXXXXXXXXXXXXXCFVYS 388
           M+IG  +  SRSR++R+  S S KES+SES+P W   W                 C+  S
Sbjct: 1   MDIGGMR-KSRSRNLRLNPSCSLKESSSESKPIWTSLWRKIVKQYDVKKKKKMT-CYDCS 58

Query: 389 YDENEYMQNFDEGSEMGNTDLLC 457
           YD   YMQNFD+GSE GN D LC
Sbjct: 59  YDWEGYMQNFDQGSEKGNVDFLC 81


>gb|KJB54880.1| hypothetical protein B456_009G052600 [Gossypium raimondii]
 gb|PPD79604.1| hypothetical protein GOBAR_DD23468 [Gossypium barbadense]
 gb|PPS05768.1| hypothetical protein GOBAR_AA14867 [Gossypium barbadense]
          Length = 112

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
 Frame = +2

Query: 209 MEIGNW--QIHSRSRSMRVGRSYSQKESNSESEPKWIRFWXXXXXXXXXXXXXXXXXCFV 382
           MEI  W  Q  SR  ++++GRSY+Q+  +  S+PKW  FW                  F 
Sbjct: 1   MEIKIWHRQCSSRLETIKLGRSYTQRGHDEHSKPKWRTFWKIFTRERKKIFASPVG--FQ 58

Query: 383 YSYDENEYMQNFDEGSEMGNTDLL 454
            SYD +EY QNFD+G+     D L
Sbjct: 59  ASYDPDEYSQNFDQGTGWAEPDNL 82


Top