BLASTX nr result

ID: Chrysanthemum21_contig00048607 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00048607
         (695 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY68305.1| hypothetical protein LSAT_1X23440 [Lactuca sativa]     124   7e-32

>gb|PLY68305.1| hypothetical protein LSAT_1X23440 [Lactuca sativa]
          Length = 173

 Score =  124 bits (310), Expect = 7e-32
 Identities = 72/155 (46%), Positives = 90/155 (58%), Gaps = 16/155 (10%)
 Frame = -3

Query: 642 IEMAGRFHFFXXXXXXXXXXXLNGVAPQTNAARLPKFGYEELEKGN-GVPNAAPYESIKR 466
           I MA R HFF             GV PQTNAAR+ K+  ++ EK N  + N  P  SIKR
Sbjct: 22  ISMATRLHFFTLVVVLLITLIFIGVTPQTNAARVSKYMIKDFEKENRNISNTVPDGSIKR 81

Query: 465 FGSSARLLKEKDVNNP---------------GSIPNTPQSEDDPADDDIRANPRPRVMGH 331
                R L+EKD+ NP                S+ ++P++E  P  +D+RANP PRVMGH
Sbjct: 82  TRPEPRSLEEKDMKNPRPGSRPQRPLHRGIKNSVRSSPKTEGGP--EDMRANPNPRVMGH 139

Query: 330 GHYRVWRSQPSSLGEAVEMEGREVLIPKKPKRRNP 226
           G YRVWRSQPS +GE   MEGREV+IPK  +RR+P
Sbjct: 140 GTYRVWRSQPSGMGEEENMEGREVIIPKS-QRRHP 173


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