BLASTX nr result

ID: Chrysanthemum21_contig00048603 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00048603
         (369 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY78700.1| hypothetical protein LSAT_9X46760 [Lactuca sativa]     100   5e-25

>gb|PLY78700.1| hypothetical protein LSAT_9X46760 [Lactuca sativa]
          Length = 84

 Score = 99.8 bits (247), Expect = 5e-25
 Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
 Frame = +2

Query: 8   IKMELLIVFLMVMASFAF--TTRGSEVNWDGKKYCSNMVCKLGTGDVFCTADCNPRGWTH 181
           +K  +L++ L + +++A    T+G   NWDG+K+CS MVCK+GTGD FCT DC PRGWT+
Sbjct: 4   MKFFILLLILTITSAWATKEATKGLVPNWDGRKFCSTMVCKMGTGDAFCTEDCIPRGWTN 63

Query: 182 GQCIDIASENDGKGYCCCWTP 244
           GQC  +       G CCCWTP
Sbjct: 64  GQCDHLPGITGDTGNCCCWTP 84


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